[622] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | #************************************************************** |
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| 4 | # Author: Sebastien Denvil, Martial Mancip, Arnaud Caubel |
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| 5 | # Contact: Arnaud.Caubel__at__lsce.ipsl.fr |
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| 6 | # $Revision:: $ Revision of last commit |
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| 7 | # $Author:: $ Author of last commit |
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| 8 | # $Date:: $ Date of last commit |
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| 9 | # IPSL (2006) |
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| 10 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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| 11 | # |
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| 12 | #************************************************************** |
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| 13 | |
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| 14 | #========================================================= |
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| 15 | # The documentation of this file can be automatically generated |
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[623] | 16 | # if you use the prefix #D- for comments to be extracted. |
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[622] | 17 | # Extract with command: cat lib* | grep "^#D-" | cut -c "4-" |
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| 18 | #========================================================= |
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| 19 | |
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| 20 | #D-#================================================== |
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[623] | 21 | #D-LibIGCM_sys for Curie |
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[622] | 22 | #D-#================================================== |
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| 23 | #D- |
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[623] | 24 | #D- This ksh library if a layer under some usefull |
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[622] | 25 | #D-environment variables and shell commands. |
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| 26 | #D-All those definitions depend on host particularities. |
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| 27 | #D-It manages a stack mechanism and test validity of operations. |
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| 28 | #D-All function described bellow must be prefixed by IGCM_sys. |
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| 29 | |
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| 30 | #==================================================== |
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| 31 | # libIGCM_sys PARAMETERS |
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| 32 | #==================================================== |
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| 33 | |
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| 34 | #==================================================== |
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| 35 | # set DEBUG_sys to true to output calls of function |
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| 36 | typeset -r DEBUG_sys=${DEBUG_sys:=true} |
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| 37 | |
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| 38 | #==================================================== |
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| 39 | # Turn in dry run mode ? (sys_Put_Rest, sys_Put_Out, sys_Get) |
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| 40 | typeset -r DRYRUN=${DRYRUN:=0} |
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| 41 | |
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| 42 | # YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE ! |
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| 43 | # ------------------------------------------------------------------------------------- |
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| 44 | # | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
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| 45 | # | | Cp/Exe param files | | Chmod | | |
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| 46 | # | | Qsub | | | | |
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| 47 | # ------------------------------------------------------------------------------------- |
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| 48 | # | 0 | yes | yes | yes | yes | |
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| 49 | # ------------------------------------------------------------------------------------- |
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| 50 | # | 1 | yes | yes | yes | no | |
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| 51 | # ------------------------------------------------------------------------------------- |
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| 52 | # | 2 | yes | yes | no | no | |
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| 53 | # ------------------------------------------------------------------------------------- |
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| 54 | # | 3 | yes | no | no | no | |
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| 55 | # ------------------------------------------------------------------------------------- |
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| 56 | |
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| 57 | #===================================================== |
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| 58 | # Global Variables : |
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| 59 | #===================================================== |
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| 60 | # Language : "fr" or "en" |
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| 61 | typeset -r MYLANG="fr" |
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| 62 | |
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| 63 | #===================================================== |
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| 64 | # Host and user names |
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| 65 | # $hostname ou hostname |
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| 66 | typeset HOST=${HOST:=$( hostname )} |
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| 67 | # $username ou whoami |
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| 68 | typeset LOGIN=${LOGIN:=$( whoami )} |
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| 69 | # $hostname of the MASTER job |
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| 70 | typeset MASTER=curie |
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| 71 | |
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| 72 | #D- |
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| 73 | #D-#================================================== |
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| 74 | #D-Program used in libIGCM |
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| 75 | #D-#================================================== |
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| 76 | |
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| 77 | # rsync with path |
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| 78 | typeset -r RSYNC=/usr/bin/rsync |
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| 79 | # RSYNC_opt args to rsync |
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| 80 | typeset -r RSYNC_opt="-va" |
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| 81 | # ie storage filesystem |
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[623] | 82 | typeset -r STOREHOST=${MASTER} |
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[622] | 83 | |
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| 84 | #==================================================== |
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| 85 | # Source default environment |
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| 86 | #==================================================== |
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| 87 | ##. /etc/profile |
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| 88 | |
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| 89 | #==================================================== |
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| 90 | # Set environment tools (ferret, nco, cdo) |
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| 91 | #==================================================== |
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[712] | 92 | if [ X${TaskType} = Xcomputing ] ; then |
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| 93 | . /ccc/cont003/home/dsm/p86ipsl/.atlas_env_calcul_curie_ksh |
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| 94 | else |
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| 95 | . /ccc/cont003/home/dsm/p86ipsl/.atlas_env_post_curie_ksh |
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| 96 | fi |
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[622] | 97 | |
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| 98 | #==================================================== |
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| 99 | # Specific for ocean additionnal diagnostic |
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| 100 | export FER_GO="$FER_GO /home/cont003/p86denv/IGCM_POST_UTIL/JNL /home/cont003/p86denv/GRAF /home/cont003/p86denv/GRAF/GO" |
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| 101 | export FER_PALETTE="$FER_PALETTE /home/cont003/p86denv/GRAF/PALET" |
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| 102 | |
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| 103 | #==================================================== |
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| 104 | # Host specific DIRECTORIES |
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| 105 | #==================================================== |
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| 106 | |
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[623] | 107 | # ============ CESIUM START ============ # |
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| 108 | |
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[622] | 109 | #==================================================== |
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[623] | 110 | #- Mirror libIGCM from titane to cesium if needed |
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| 111 | #ROOTSYS=$( echo ${libIGCM} | gawk -F"/" '{print $3}' ) |
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| 112 | #if [ ! ${ROOTSYS} = "home" ] ; then |
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| 113 | # typeset -r MirrorlibIGCM=${MirrorlibIGCM:=true} |
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| 114 | #else |
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| 115 | # typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false} |
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| 116 | #fi |
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| 117 | |
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| 118 | #==================================================== |
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| 119 | #- libIGCM_POST |
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| 120 | #if ( ${MirrorlibIGCM} ) ; then |
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| 121 | # PATHlibIGCM=$( echo ${libIGCM} | gawk -F"${LOGIN}/" '{print $2}' | sed -e "s&/libIGCM&&" ) |
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| 122 | # typeset -r libIGCM_POST=${HOME}/MIRROR/${PATHlibIGCM}/libIGCM |
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| 123 | #else |
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| 124 | # typeset -r libIGCM_POST=${libIGCM} |
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| 125 | #fi |
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| 126 | |
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| 127 | # ============ CESIUM END ============ # |
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| 128 | |
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| 129 | #==================================================== |
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| 130 | #- MirrorlibIGCM for frontend |
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| 131 | typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false} |
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| 132 | |
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| 133 | #==================================================== |
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| 134 | #- libIGCM_POST for frontend |
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| 135 | typeset -r libIGCM_POST=${libIGCM} |
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| 136 | |
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| 137 | #==================================================== |
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[622] | 138 | #- R_EXE (==> BIN_DIR = ${MODIPSL}/bin ) |
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| 139 | typeset -r R_EXE="${MODIPSL}/bin" |
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| 140 | |
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| 141 | #==================================================== |
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| 142 | #- SUBMIT_DIR : submission dir |
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| 143 | typeset SUBMIT_DIR=${SUBMIT_DIR:=${BRIDGE_MSUB_PWD}} |
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| 144 | |
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| 145 | #==================================================== |
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[623] | 146 | #- ARCHIVE (dedicated to large files) |
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[622] | 147 | typeset -r ARCHIVE=${CCCSTOREDIR} |
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| 148 | |
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[623] | 149 | #- ARCHIVE (dedicated to small/medium files) |
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| 150 | typeset -r STORAGE=${CCCWORKDIR} |
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[622] | 151 | |
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| 152 | #==================================================== |
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| 153 | #- IN |
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| 154 | typeset -r R_IN=${R_IN:=/ccc/work/cont003/dsm/p86ipsl/IGCM} |
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| 155 | typeset -r R_IN_ECMWF=${R_IN_ECMWF:=/ccc/work/cont003/dsm/p24data} |
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| 156 | |
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| 157 | #==================================================== |
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[623] | 158 | #- R_OUT |
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[622] | 159 | typeset -r R_OUT=${ARCHIVE}/IGCM_OUT |
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| 160 | |
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| 161 | #==================================================== |
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[623] | 162 | #- R_FIG (hosting figures : monitoring and atlas, and/or small files) |
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| 163 | typeset -r R_FIG=${STORAGE}/IGCM_OUT |
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[622] | 164 | |
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| 165 | #==================================================== |
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[623] | 166 | #- R_BUF (ONLY FOR double copy an scratch) |
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| 167 | typeset -r R_BUF=${SCRATCHDIR}/IGCM_OUT |
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| 168 | |
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| 169 | #==================================================== |
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| 170 | #- BIG_DIR : BIG_DIR to store files waiting for rebuild |
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| 171 | typeset -r BIG_DIR=${BIG_DIR:=${SCRATCHDIR}/REBUILD} |
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| 172 | |
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| 173 | #==================================================== |
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[622] | 174 | #- OUT_POST |
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[623] | 175 | typeset -r R_OUT_POST=${SCRATCHDIR}/IGCM_OUT |
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[622] | 176 | |
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| 177 | #==================================================== |
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| 178 | #- RUN_DIR_PATH : Temporary working directory (=> TMP) |
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[712] | 179 | if [ X${TaskType} = Xcomputing ] ; then |
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[623] | 180 | typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${SCRATCHDIR}/RUN_DIR/${BRIDGE_MSUB_JOBID}} |
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[622] | 181 | else |
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[623] | 182 | typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${SCRATCHDIR}/TMPDIR_IGCM/${BRIDGE_MSUB_JOBID}} |
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[622] | 183 | fi |
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| 184 | |
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| 185 | #==================================================== |
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| 186 | #- HOST_MPIRUN_COMMAND |
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[685] | 187 | typeset -r HOST_MPIRUN_COMMAND=${HOST_MPIRUN_COMMAND:="/usr/bin/time ccc_mprun"} |
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[622] | 188 | |
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| 189 | #==================================================== |
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| 190 | #- Max number of arguments passed to nco operator or demigration command |
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| 191 | UNIX_MAX_LIMIT=360 |
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| 192 | |
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[623] | 193 | #==================================================== |
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| 194 | #- set PackDefault true on curie |
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| 195 | PackDefault=true |
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| 196 | |
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[664] | 197 | #==================================================== |
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| 198 | #- Number of core per node (max number of OpenMP task) |
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[622] | 199 | NUM_COREPERNODE=8 |
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| 200 | |
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[623] | 201 | #==================================================== |
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| 202 | #- Default number of MPI task for IPSL coupled model |
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| 203 | #- required for backward compatibility |
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| 204 | #- |
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| 205 | DEFAULT_NUM_PROC_OCE=5 |
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| 206 | DEFAULT_NUM_PROC_CPL=1 |
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[637] | 207 | (( DEFAULT_NUM_PROC_ATM = BATCH_NUM_PROC_TOT - DEFAULT_NUM_PROC_OCE - DEFAULT_NUM_PROC_CPL )) |
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| 208 | DEFAULT_NUM_PROC_TOTAL=${BATCH_NUM_PROC_TOT} |
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[623] | 209 | |
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[676] | 210 | |
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[622] | 211 | #D-#================================================== |
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| 212 | #D-function IGCM_sys_RshMaster |
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[623] | 213 | #D-* Purpose: Connection to frontend machine. |
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[622] | 214 | #D-* Examples: |
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| 215 | #D- |
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| 216 | function IGCM_sys_RshMaster { |
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[623] | 217 | IGCM_debug_PushStack "IGCM_sys_RshMaster" $@ |
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| 218 | /bin/ksh <<-EOF |
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[622] | 219 | export libIGCM=${libIGCM} |
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| 220 | export DEBUG_debug=${DEBUG_debug} |
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| 221 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
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| 222 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
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| 223 | ${@} |
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| 224 | EOF |
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[623] | 225 | if [ $? -gt 0 ] ; then |
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| 226 | echo "IGCM_sys_RshMaster : erreur." |
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| 227 | IGCM_debug_Exit "IGCM_sys_RshMaster" |
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| 228 | fi |
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| 229 | IGCM_debug_PopStack "IGCM_sys_RshMaster" |
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[622] | 230 | } |
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| 231 | |
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| 232 | #D-#================================================== |
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| 233 | #D-function IGCM_sys_RshArchive |
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| 234 | #D-* Purpose: Archive rsh command |
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| 235 | #D-* Examples: |
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| 236 | #D- |
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| 237 | function IGCM_sys_RshArchive { |
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[623] | 238 | IGCM_debug_PushStack "IGCM_sys_RshArchive" $@ |
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| 239 | /bin/ksh <<-EOF |
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[622] | 240 | ${@} |
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| 241 | EOF |
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[623] | 242 | if [ $? -gt 0 ] ; then |
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| 243 | echo "IGCM_sys_RshArchive : erreur." |
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| 244 | IGCM_debug_Exit "IGCM_sys_RshArchive" |
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| 245 | fi |
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| 246 | IGCM_debug_PopStack "IGCM_sys_RshArchive" |
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[622] | 247 | } |
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| 248 | |
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| 249 | #D-#================================================== |
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| 250 | #D-function IGCM_sys_RshPost |
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| 251 | #D-* Purpose: Post-process rsh command |
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| 252 | #D-* Examples: |
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| 253 | #D- |
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| 254 | function IGCM_sys_RshPost { |
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[623] | 255 | IGCM_debug_PushStack "IGCM_sys_RshPost" $@ |
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| 256 | if ( $DEBUG_sys ) ; then |
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| 257 | echo "IGCM_sys_RshPost :" $@ |
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| 258 | fi |
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[622] | 259 | |
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[623] | 260 | #echo cat tmp_IGCM_sys_RshPost_$$ INITIAL |
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| 261 | #cat tmp_IGCM_sys_RshPost_$$ |
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| 262 | # keep standard input (stdin) for the loop onto temporary file |
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| 263 | cat >tmp_IGCM_sys_RshPost_$$ |
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| 264 | |
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| 265 | # ============ FRONTEND START ============ # |
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| 266 | |
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| 267 | /bin/ksh <tmp_IGCM_sys_RshPost_$$ |
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| 268 | if [ $? -gt 0 ] ; then |
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| 269 | echo "IGCM_sys_RshPost : erreur." |
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| 270 | IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 271 | fi |
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| 272 | # delete temporary file |
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| 273 | \rm tmp_IGCM_sys_RshPost_$$ |
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| 274 | |
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| 275 | # ============ FRONTEND END ============ # |
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| 276 | |
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| 277 | # ============ CESIUM START ============ # |
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| 278 | # typeset NB_ESSAI DELAI status i |
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| 279 | # if [ "X$( grep rebuild_from tmp_IGCM_sys_RshPost_$$ )" != "X" ] ; then |
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| 280 | # #little hack so that rebuild submission is done on titane not an cesium |
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| 281 | # |
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| 282 | # libIGCM_POST_sed=$( echo $libIGCM_POST | sed 's/\//\\\//g' ) |
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| 283 | # POST_DIR_sed=$( echo ${POST_DIR} | sed 's/\//\\\//g' ) |
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| 284 | # sed "s/IGCM_sys_QsubPost/IGCM_sys_Qsub/g" tmp_IGCM_sys_RshPost_$$ > tmp.txt |
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| 285 | # sed "s/ rebuild_fromWorkdir/ ${libIGCM_POST_sed}\/rebuild_fromWorkdir.job/g" tmp.txt > tmp_IGCM_sys_RshPost_$$ |
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| 286 | # sed "s/ rebuild_fromArchive/ ${libIGCM_POST_sed}\/rebuild_fromArchive.job/g" tmp_IGCM_sys_RshPost_$$ > tmp.txt |
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| 287 | # sed "s/Script_Post_Output=/Script_Output=${POST_DIR_sed}\//g" tmp.txt > tmp_IGCM_sys_RshPost_$$ |
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| 288 | # \mv tmp.txt tmp_IGCM_sys_RshPost_$$ |
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| 289 | # |
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| 290 | # echo cat tmp_IGCM_sys_RshPost_$$ AFTER |
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| 291 | # cat tmp_IGCM_sys_RshPost_$$ |
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| 292 | # |
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| 293 | # /bin/ksh <tmp_IGCM_sys_RshPost_$$ |
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| 294 | # if [ $? -gt 0 ] ; then |
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| 295 | # echo "IGCM_sys_RshPost : erreur." |
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| 296 | # IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 297 | # fi |
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| 298 | # # delete temporary file |
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| 299 | # \rm tmp_IGCM_sys_RshPost_$$ |
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| 300 | # |
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| 301 | # else |
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| 302 | # # number of tentative |
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| 303 | # NB_ESSAI=10 |
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| 304 | # # time delay between tentative |
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| 305 | # DELAI=10 |
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| 306 | # i=0 |
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| 307 | # while [ $i -ne $NB_ESSAI ] ; do |
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| 308 | # ssh -t titane996 ssh cesium /bin/ksh <tmp_IGCM_sys_RshPost_$$ |
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| 309 | # status=$? |
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| 310 | # if [ ${status} -ne 0 ]; |
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| 311 | # then |
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| 312 | # sleep $DELAI |
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| 313 | # else |
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| 314 | # break |
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| 315 | # fi |
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| 316 | # let i=$i+1 |
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| 317 | # done |
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| 318 | # # delete temporary file |
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| 319 | # \rm tmp_IGCM_sys_RshPost_$$ |
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| 320 | # |
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| 321 | # if [ ${status} -gt 0 ] ; then |
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| 322 | # echo "IGCM_sys_RshPost : erreur." |
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| 323 | # IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 324 | # fi |
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| 325 | # fi |
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| 326 | |
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| 327 | # ============ CESIUM END ============ # |
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| 328 | |
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| 329 | IGCM_debug_PopStack "IGCM_sys_RshPost" |
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[622] | 330 | } |
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| 331 | |
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| 332 | #D-#================================================== |
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| 333 | #D-function IGCM_sys_SendMail |
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| 334 | #D-* Purpose: Send mail when simulation is over |
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| 335 | #D-* Examples: |
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| 336 | #D- |
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| 337 | function IGCM_sys_SendMail { |
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[623] | 338 | IGCM_debug_PushStack "IGCM_sys_SendMail" $@ |
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| 339 | if ( $DEBUG_sys ) ; then |
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| 340 | echo "IGCM_sys_SendMail :" $@ |
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| 341 | fi |
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[622] | 342 | |
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[623] | 343 | if ( ${ExitFlag} ) ; then |
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| 344 | status=failed |
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| 345 | else |
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| 346 | status=completed |
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| 347 | fi |
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[622] | 348 | |
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[623] | 349 | cat << END_MAIL > job_end.mail |
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[622] | 350 | Dear ${LOGIN}, |
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| 351 | |
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| 352 | Simulation ${config_UserChoices_JobName} is ${status} on supercomputer `hostname`. |
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| 353 | Job started : ${DateBegin} |
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| 354 | Job ended : ${DateEnd} |
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| 355 | Output files are available in ${R_SAVE} |
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[623] | 356 | Files to be rebuild are temporarily available in ${REBUILD_DIR} |
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| 357 | Pre-packed files are temporarily available in ${R_BUFR} |
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[622] | 358 | Script files, Script Outputs and Debug files (if necessary) are available in ${SUBMIT_DIR} |
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| 359 | END_MAIL |
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| 360 | |
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| 361 | if [ ! -z ${config_UserChoices_MailName} ] ; then |
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[623] | 362 | mail -s "${config_UserChoices_JobName} ${status}" ${config_UserChoices_MailName} < job_end.mail |
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[622] | 363 | elif [ -f ~/.forward ] ; then |
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[623] | 364 | mail -s "${config_UserChoices_JobName} ${status}" $( cat ~/.forward ) < job_end.mail |
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[622] | 365 | fi |
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[623] | 366 | sleep 10 |
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| 367 | rm -f job_end.mail |
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[622] | 368 | |
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[623] | 369 | if [ $? -gt 0 ] ; then |
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| 370 | echo "IGCM_sys_SendMail : erreur." |
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| 371 | IGCM_debug_Exit "IGCM_sys_SendMail" |
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| 372 | fi |
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| 373 | IGCM_debug_PopStack "IGCM_sys_SendMail" |
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[622] | 374 | } |
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| 375 | |
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| 376 | #D-#================================================== |
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| 377 | #D-function IGCM_sys_Mkdir |
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| 378 | #D-* Purpose: Master locale mkdir command |
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| 379 | #D-* Examples: |
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| 380 | #D- |
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| 381 | function IGCM_sys_Mkdir { |
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[623] | 382 | IGCM_debug_PushStack "IGCM_sys_Mkdir" $@ |
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| 383 | if ( $DEBUG_sys ) ; then |
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| 384 | echo "IGCM_sys_Mkdir :" $@ |
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| 385 | fi |
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| 386 | if [ ! -d ${1} ]; then |
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| 387 | \mkdir -p $1 |
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| 388 | if [ $? -gt 0 ] ; then |
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| 389 | echo "IGCM_sys_Mkdir : erreur." |
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| 390 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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[622] | 391 | fi |
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[623] | 392 | fi |
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| 393 | # vérification : |
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| 394 | if [ ! -d ${1} ] ; then |
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| 395 | echo "IGCM_sys_Mkdir : erreur." |
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| 396 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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| 397 | fi |
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| 398 | IGCM_debug_PopStack "IGCM_sys_Mkdir" |
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[622] | 399 | } |
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| 400 | |
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| 401 | #D-#================================================== |
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| 402 | #D-function IGCM_sys_MkdirArchive |
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| 403 | #D-* Purpose: Mkdir on Archive |
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| 404 | #D-* Examples: |
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| 405 | #D- |
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| 406 | function IGCM_sys_MkdirArchive { |
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[623] | 407 | IGCM_debug_PushStack "IGCM_sys_MkdirArchive" $@ |
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| 408 | if ( $DEBUG_sys ) ; then |
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| 409 | echo "IGCM_sys_MkdirArchive :" $@ |
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| 410 | fi |
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| 411 | #- creation de repertoire sur le serveur fichier |
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| 412 | if [ ! -d ${1} ]; then |
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| 413 | \mkdir -p $1 |
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| 414 | if [ $? -gt 0 ] ; then |
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| 415 | echo "IGCM_sys_MkdirArchive : erreur." |
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| 416 | IGCM_debug_Exit "IGCM_sys_MkdirArchive" |
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[622] | 417 | fi |
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[623] | 418 | fi |
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| 419 | IGCM_debug_PopStack "IGCM_sys_MkdirArchive" |
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[622] | 420 | } |
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| 421 | |
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| 422 | #D-#================================================== |
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| 423 | #D-function IGCM_sys_MkdirWork |
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| 424 | #D-* Purpose: Mkdir on Work |
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| 425 | #D-* Examples: |
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| 426 | #D- |
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| 427 | function IGCM_sys_MkdirWork { |
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[623] | 428 | IGCM_debug_PushStack "IGCM_sys_MkdirWork" $@ |
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| 429 | if ( $DEBUG_sys ) ; then |
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| 430 | echo "IGCM_sys_MkdirWork :" $@ |
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| 431 | fi |
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| 432 | #- creation de repertoire sur le serveur fichier |
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| 433 | if [ ! -d ${1} ]; then |
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| 434 | \mkdir -p $1 |
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| 435 | if [ $? -gt 0 ] ; then |
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| 436 | echo "IGCM_sys_MkdirWork : erreur." |
---|
| 437 | IGCM_debug_Exit "IGCM_sys_MkdirWork" |
---|
[622] | 438 | fi |
---|
[623] | 439 | fi |
---|
| 440 | IGCM_debug_PopStack "IGCM_sys_MkdirWork" |
---|
[622] | 441 | } |
---|
| 442 | |
---|
| 443 | #D-#================================================== |
---|
| 444 | #D-function IGCM_sys_Cd |
---|
| 445 | #D-* Purpose: master cd command |
---|
| 446 | #D-* Examples: |
---|
| 447 | #D- |
---|
| 448 | function IGCM_sys_Cd { |
---|
[623] | 449 | IGCM_debug_PushStack "IGCM_sys_Cd" $@ |
---|
| 450 | if ( $DEBUG_sys ) ; then |
---|
| 451 | echo "IGCM_sys_Cd :" $@ |
---|
| 452 | fi |
---|
| 453 | \cd $1 |
---|
| 454 | if [ $? -gt 0 ] ; then |
---|
| 455 | echo "IGCM_sys_Cd : erreur." |
---|
| 456 | IGCM_debug_Exit "IGCM_sys_Cd" |
---|
| 457 | fi |
---|
| 458 | IGCM_debug_PopStack "IGCM_sys_Cd" |
---|
[622] | 459 | } |
---|
| 460 | |
---|
| 461 | #D-#================================================== |
---|
| 462 | #D-function IGCM_sys_Chmod |
---|
| 463 | #D-* Purpose: Chmod |
---|
| 464 | #D-* Examples: |
---|
| 465 | #D- |
---|
| 466 | function IGCM_sys_Chmod { |
---|
[623] | 467 | IGCM_debug_PushStack "IGCM_sys_Chmod" -- $@ |
---|
| 468 | if ( $DEBUG_sys ) ; then |
---|
| 469 | echo "IGCM_sys_Chmod :" $@ |
---|
| 470 | fi |
---|
| 471 | if [ $DRYRUN -le 1 ]; then |
---|
| 472 | \chmod $@ |
---|
| 473 | if [ $? -gt 0 ] ; then |
---|
| 474 | echo "IGCM_sys_Chmod : erreur." |
---|
| 475 | IGCM_debug_Exit "IGCM_sys_Chmod" |
---|
[622] | 476 | fi |
---|
[623] | 477 | else |
---|
| 478 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 479 | fi |
---|
| 480 | IGCM_debug_PopStack "IGCM_sys_Chmod" |
---|
[622] | 481 | } |
---|
| 482 | |
---|
| 483 | #D-#================================================== |
---|
| 484 | #D-function IGCM_sys_FileSize |
---|
| 485 | #D-* Purpose: Filesize |
---|
| 486 | #D-* Examples: |
---|
| 487 | #D- |
---|
| 488 | function IGCM_sys_FileSize { |
---|
[623] | 489 | IGCM_debug_PushStack "IGCM_sys_FileSize" $@ |
---|
[622] | 490 | |
---|
[623] | 491 | typeset sizeF |
---|
| 492 | set +A sizeF -- $( ls -la ${1} ) |
---|
| 493 | if [ $? -gt 0 ] ; then |
---|
| 494 | IGCM_debug_Exit "IGCM_sys_FileSize" |
---|
| 495 | fi |
---|
| 496 | eval ${2}=${sizeF[4]} |
---|
[622] | 497 | |
---|
[623] | 498 | IGCM_debug_PopStack "IGCM_sys_FileSize" |
---|
[622] | 499 | } |
---|
| 500 | |
---|
| 501 | #D-#================================================== |
---|
| 502 | #D-function IGCM_sys_TestDir |
---|
| 503 | #D-* Purpose: Test Directory that must exists |
---|
| 504 | #D-* Examples: |
---|
| 505 | #D- |
---|
| 506 | function IGCM_sys_TestDir { |
---|
[623] | 507 | IGCM_debug_PushStack "IGCM_sys_TestDir" $@ |
---|
| 508 | if ( $DEBUG_sys ) ; then |
---|
| 509 | echo "IGCM_sys_TestDir :" $@ |
---|
| 510 | fi |
---|
| 511 | typeset ExistFlag |
---|
| 512 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
---|
| 513 | IGCM_debug_PopStack "IGCM_sys_TestDir" |
---|
[622] | 514 | |
---|
[623] | 515 | return ${ExistFlag} |
---|
[622] | 516 | } |
---|
| 517 | |
---|
| 518 | #D-#================================================== |
---|
| 519 | #D-function IGCM_sys_TestDirArchive |
---|
| 520 | #D-* Purpose: Test Directory that must exists on Archive |
---|
| 521 | #D-* Examples: |
---|
| 522 | #D- |
---|
| 523 | function IGCM_sys_TestDirArchive { |
---|
[623] | 524 | IGCM_debug_PushStack "IGCM_sys_TestDirArchive" $@ |
---|
| 525 | if ( $DEBUG_sys ) ; then |
---|
| 526 | echo "IGCM_sys_TestDirArchive :" $@ |
---|
| 527 | fi |
---|
| 528 | typeset ExistFlag |
---|
| 529 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
---|
| 530 | IGCM_debug_PopStack "IGCM_sys_TestDirArchive" |
---|
[622] | 531 | |
---|
[623] | 532 | return ${ExistFlag} |
---|
[622] | 533 | } |
---|
| 534 | |
---|
| 535 | #D-#================================================== |
---|
[623] | 536 | #D-function IGCM_sys_IsFileArchived |
---|
| 537 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
---|
| 538 | #D-* Examples: |
---|
| 539 | #D- |
---|
| 540 | function IGCM_sys_IsFileArchived { |
---|
| 541 | IGCM_debug_PushStack "IGCM_sys_IsFileArchived" $@ |
---|
| 542 | if ( $DEBUG_sys ) ; then |
---|
| 543 | echo "IGCM_sys_IsFileArchived :" $@ |
---|
| 544 | fi |
---|
| 545 | typeset IsArchivedFlag |
---|
| 546 | IsArchivedFlag=$( [ X$( echo $1 | grep ^\/ccc\/store ) != X ] && echo 0 || echo 1 ) |
---|
| 547 | IGCM_debug_PopStack "IGCM_sys_IsFileArchived" |
---|
| 548 | |
---|
| 549 | return ${IsArchivedFlag} |
---|
| 550 | } |
---|
| 551 | |
---|
| 552 | #D-#================================================== |
---|
[622] | 553 | #D-function IGCM_sys_TestFileArchive |
---|
| 554 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
---|
| 555 | #D-* Examples: |
---|
| 556 | #D- |
---|
| 557 | function IGCM_sys_TestFileArchive { |
---|
[623] | 558 | IGCM_debug_PushStack "IGCM_sys_TestFileArchive" $@ |
---|
| 559 | typeset ExistFlag |
---|
| 560 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
---|
| 561 | IGCM_debug_PopStack "IGCM_sys_TestFileArchive" |
---|
[622] | 562 | |
---|
[623] | 563 | return ${ExistFlag} |
---|
[622] | 564 | } |
---|
| 565 | |
---|
| 566 | #D-#================================================== |
---|
[623] | 567 | #D-function IGCM_sys_TestFileBuffer |
---|
| 568 | #D-* Purpose: Test file that must NOT EXISTS on Buffer |
---|
| 569 | #D-* Examples: |
---|
| 570 | #D- |
---|
| 571 | function IGCM_sys_TestFileBuffer { |
---|
| 572 | IGCM_debug_PushStack "IGCM_sys_TestFileBuffer" $@ |
---|
| 573 | typeset ExistFlag |
---|
| 574 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
---|
| 575 | IGCM_debug_PopStack "IGCM_sys_TestFileBuffer" |
---|
| 576 | |
---|
| 577 | return ${ExistFlag} |
---|
| 578 | } |
---|
| 579 | |
---|
| 580 | #D-#================================================== |
---|
[622] | 581 | #D-function IGCM_sys_CountFileArchive |
---|
| 582 | #D-* Purpose: Count files on Archive filesystem |
---|
| 583 | #D-* Examples: |
---|
| 584 | #D- |
---|
| 585 | function IGCM_sys_CountFileArchive { |
---|
[623] | 586 | IGCM_debug_PushStack "IGCM_sys_CountFileArchive" $@ |
---|
| 587 | ls ${@} 2>/dev/null | wc -l |
---|
| 588 | if [ $? -gt 0 ] ; then |
---|
| 589 | echo "IGCM_sys_CountFileArchive : erreur." |
---|
| 590 | fi |
---|
| 591 | IGCM_debug_PopStack "IGCM_sys_CountFileArchive" |
---|
[622] | 592 | } |
---|
| 593 | |
---|
| 594 | #D-#================================================== |
---|
[623] | 595 | #D-function IGCM_sys_CountFileBuffer |
---|
| 596 | #D-* Purpose: Count files on Scratch filesystem |
---|
| 597 | #D-* Examples: |
---|
| 598 | #D- |
---|
| 599 | function IGCM_sys_CountFileBuffer { |
---|
| 600 | IGCM_debug_PushStack "IGCM_sys_CountFileBuffer" $@ |
---|
| 601 | ls ${@} 2>/dev/null | wc -l |
---|
| 602 | if [ $? -gt 0 ] ; then |
---|
| 603 | echo "IGCM_sys_CountFileBuffer : erreur." |
---|
| 604 | fi |
---|
| 605 | IGCM_debug_PopStack "IGCM_sys_CountFileBuffer" |
---|
| 606 | } |
---|
| 607 | |
---|
| 608 | #D-#================================================== |
---|
[622] | 609 | #D-function IGCM_sys_Tree |
---|
| 610 | #D-* Purpose: Tree directories with files on ${ARCHIVE} |
---|
| 611 | #D-* Examples: IGCM_sys_Tree ${R_IN} ${R_OUT} |
---|
| 612 | #D- |
---|
| 613 | function IGCM_sys_Tree { |
---|
[623] | 614 | IGCM_debug_PushStack "IGCM_sys_Tree" $@ |
---|
| 615 | if ( $DEBUG_sys ) ; then |
---|
| 616 | echo "IGCM_sys_Tree :" $@ |
---|
| 617 | fi |
---|
[622] | 618 | |
---|
[623] | 619 | \ls -lR ${@} |
---|
[622] | 620 | |
---|
[623] | 621 | IGCM_debug_PopStack "IGCM_sys_Tree" |
---|
[622] | 622 | } |
---|
| 623 | |
---|
| 624 | #D-#================================================== |
---|
| 625 | #D-function IGCM_sys_Tar |
---|
[623] | 626 | #D-* Purpose: master tar command |
---|
[622] | 627 | #D-* Examples: |
---|
| 628 | #D- |
---|
| 629 | function IGCM_sys_Tar { |
---|
[623] | 630 | IGCM_debug_PushStack "IGCM_sys_Tar" $@ |
---|
| 631 | if ( $DEBUG_sys ) ; then |
---|
| 632 | echo "IGCM_sys_Tar :" $@ |
---|
| 633 | fi |
---|
| 634 | \tar cf $@ |
---|
| 635 | if [ $? -gt 0 ] ; then |
---|
| 636 | echo "IGCM_sys_Tar : erreur." |
---|
| 637 | IGCM_debug_Exit "IGCM_sys_Tar" |
---|
| 638 | fi |
---|
| 639 | IGCM_debug_PopStack "IGCM_sys_Tar" |
---|
[622] | 640 | } |
---|
| 641 | |
---|
| 642 | #D-#================================================== |
---|
| 643 | #D-function IGCM_sys_UnTar |
---|
| 644 | #D-* Purpose: master un-tar command |
---|
| 645 | #D-* Examples: |
---|
| 646 | #D- |
---|
| 647 | function IGCM_sys_UnTar { |
---|
[623] | 648 | IGCM_debug_PushStack "IGCM_sys_UnTar" $@ |
---|
| 649 | if ( $DEBUG_sys ) ; then |
---|
| 650 | echo "IGCM_sys_UnTar :" $@ |
---|
| 651 | fi |
---|
| 652 | \tar xvf $1 |
---|
| 653 | if [ $? -gt 0 ] ; then |
---|
| 654 | echo "IGCM_sys_UnTar : erreur." |
---|
| 655 | IGCM_debug_Exit "IGCM_sys_UnTar" |
---|
| 656 | fi |
---|
| 657 | IGCM_debug_PopStack "IGCM_sys_UnTar" |
---|
[622] | 658 | } |
---|
| 659 | |
---|
| 660 | #D-#================================================== |
---|
| 661 | #D-function IGCM_sys_Qsub |
---|
| 662 | #D-* Purpose: Qsub new job |
---|
| 663 | #D-* Examples: |
---|
| 664 | #D- |
---|
| 665 | function IGCM_sys_Qsub { |
---|
[623] | 666 | IGCM_debug_PushStack "IGCM_sys_Qsub" $@ |
---|
| 667 | if ( $DEBUG_sys ) ; then |
---|
| 668 | echo "IGCM_sys_Qsub :" $@ |
---|
| 669 | fi |
---|
| 670 | typeset options |
---|
| 671 | if [ ${config_UserChoices_JobName}.${CumulPeriod} = "." ] ; then |
---|
| 672 | options=" -o ${Script_Output} -e ${Script_Output}" |
---|
| 673 | else |
---|
| 674 | options=" -o ${Script_Output} -e ${Script_Output} -r ${config_UserChoices_JobName}.${CumulPeriod}" |
---|
| 675 | fi |
---|
[622] | 676 | |
---|
[625] | 677 | /usr/bin/ccc_msub ${options} < $1 |
---|
[623] | 678 | if [ $? -gt 0 ] ; then |
---|
| 679 | echo "IGCM_sys_Qsub : erreur ${options} $1" |
---|
| 680 | IGCM_debug_Exit "IGCM_sys_Qsub" |
---|
| 681 | fi |
---|
| 682 | IGCM_debug_PopStack "IGCM_sys_Qsub" |
---|
[622] | 683 | } |
---|
| 684 | |
---|
| 685 | #D-#================================================== |
---|
| 686 | #D-function IGCM_sys_QsubPost |
---|
| 687 | #D-* Purpose: Qsub new job on scalaire |
---|
| 688 | #D-* Examples: |
---|
| 689 | #D- |
---|
| 690 | function IGCM_sys_QsubPost { |
---|
[623] | 691 | IGCM_debug_PushStack "IGCM_sys_QsubPost" $@ |
---|
| 692 | if ( $DEBUG_sys ) ; then |
---|
| 693 | echo "IGCM_sys_QsubPost :" $@ |
---|
| 694 | fi |
---|
[702] | 695 | /usr/bin/ccc_msub -Q normal -o ${POST_DIR}/${Script_Post_Output}.out -e ${POST_DIR}/${Script_Post_Output}.out ${libIGCM_POST}/$1.job |
---|
[623] | 696 | if [ $? -gt 0 ] ; then |
---|
| 697 | echo "IGCM_sys_QsubPost : erreur " $@ |
---|
| 698 | IGCM_debug_Exit "IGCM_sys_QsubPost" |
---|
| 699 | fi |
---|
| 700 | IGCM_debug_PopStack "IGCM_sys_QsubPost" |
---|
[622] | 701 | } |
---|
| 702 | |
---|
| 703 | #D-************************* |
---|
[623] | 704 | #D- File transfer functions |
---|
[622] | 705 | #D-************************* |
---|
| 706 | #D- |
---|
| 707 | |
---|
| 708 | #D-#================================================== |
---|
| 709 | #D-function IGCM_sys_Rsync_out |
---|
| 710 | #D-* Purpose: treat return val of rsync |
---|
| 711 | #D-* Examples: IGCM_sys_Rsync_out out_RET_rsync |
---|
| 712 | #D- Error values and explanations can depend on your system version. |
---|
| 713 | function IGCM_sys_Rsync_out { |
---|
[719] | 714 | status=$1 |
---|
| 715 | if [ ! $status ] ; then |
---|
[623] | 716 | echo "rsync error !" |
---|
| 717 | fi |
---|
[622] | 718 | |
---|
[623] | 719 | if [ $MYLANG = "fr" ]; then |
---|
[719] | 720 | case $status in |
---|
[623] | 721 | 0) return ;; |
---|
| 722 | 1) echo "Erreur de rsync ; RERR_SYNTAX : " |
---|
| 723 | echo "Erreur de syntaxe ou d'utilisation." |
---|
| 724 | return;; |
---|
| 725 | 2) echo "Erreur de rsync ; RERR_PROTOCOL : " |
---|
| 726 | echo "Incompatibilité de protocole." |
---|
| 727 | return;; |
---|
| 728 | 3) echo "Erreur de rsync ; RERR_FILESELECT 3" |
---|
| 729 | echo "Erreurs lors de la sélection des fichiers d'entrée sortie et" |
---|
| 730 | echo "répertoires" |
---|
| 731 | return;; |
---|
| 732 | 4) echo "Erreur de rsync ; RERR_UNSUPPORTED" |
---|
| 733 | echo "Action demandée non supportée : une tentative de manipulation de" |
---|
| 734 | echo "fichiers 64-bits sur une plate-forme qui ne les supporte pas a" |
---|
| 735 | echo "été faite ; ou une option qui est supportée par le client mais" |
---|
| 736 | echo "pas par le serveur a été spécifiée." |
---|
| 737 | return;; |
---|
| 738 | 10) echo "Erreur de rsync ; RERR_SOCKETIO" |
---|
| 739 | echo "Erreur dans le socket d'entrée sortie" |
---|
| 740 | return;; |
---|
| 741 | 11) echo "Erreur de rsync ; RERR_FILEIO" |
---|
| 742 | echo "Erreur d'entrée sortie fichier" |
---|
| 743 | return;; |
---|
| 744 | 12) echo "Erreur de rsync ; RERR_STREAMIO" |
---|
| 745 | echo "Erreur dans flux de donnée du protocole rsync" |
---|
| 746 | return;; |
---|
| 747 | 13) echo "Erreur de rsync ; RERR_MESSAGEIO" |
---|
| 748 | echo "Erreur avec les diagnostics du programme" |
---|
| 749 | return;; |
---|
| 750 | 14) echo "Erreur de rsync ; RERR_IPC" |
---|
| 751 | echo "Erreur dans le code IPC" |
---|
| 752 | return;; |
---|
| 753 | 20) echo "Erreur de rsync ; RERR_SIGNAL" |
---|
| 754 | echo "SIGUSR1 ou SIGINT reçu" |
---|
| 755 | return;; |
---|
| 756 | 21) echo "Erreur de rsync ; RERR_WAITCHILD" |
---|
| 757 | echo "Une erreur retournée par waitpid()" |
---|
| 758 | return;; |
---|
| 759 | 22) echo "Erreur de rsync ; RERR_MALLOC" |
---|
| 760 | echo "Erreur lors de l'allocation des tampons de mémoire de coeur" |
---|
| 761 | return;; |
---|
| 762 | 23) echo "" |
---|
| 763 | echo "Erreur fichier inexistant" |
---|
| 764 | return;; |
---|
| 765 | 30) echo "Erreur de rsync ; RERR_TIMEOUT" |
---|
| 766 | echo "Temps d'attente écoulé dans l'envoi/réception de données" |
---|
| 767 | return;; |
---|
[719] | 768 | *) echo "Erreur de rsync : code de retour de rsync inconnu :" $status |
---|
[623] | 769 | return;; |
---|
| 770 | esac |
---|
| 771 | elif [ $MYLANG = "en" ] ; then |
---|
[719] | 772 | case $status in |
---|
[623] | 773 | 0) return;; |
---|
| 774 | 1) echo "rsync error : Syntax or usage error " |
---|
| 775 | return;; |
---|
| 776 | 2) echo "rsync error : Protocol incompatibility " |
---|
| 777 | return;; |
---|
| 778 | 3) echo "rsync error : Errors selecting input/output files, dirs" |
---|
| 779 | return;; |
---|
| 780 | 4) echo "rsync error : Requested action not supported: an attempt" |
---|
| 781 | echo "was made to manipulate 64-bit files on a platform that cannot support" |
---|
| 782 | echo "them; or an option was specified that is supported by the client and" |
---|
| 783 | echo "not by the server." |
---|
| 784 | return;; |
---|
| 785 | 5) echo "rsync error : Error starting client-server protocol" |
---|
| 786 | return;; |
---|
| 787 | 10) echo "rsync error : Error in socket I/O " |
---|
| 788 | return;; |
---|
| 789 | 11) echo "rsync error : Error in file I/O " |
---|
| 790 | return;; |
---|
| 791 | 12) echo "rsync error : Error in rsync protocol data stream " |
---|
| 792 | return;; |
---|
| 793 | 13) echo "rsync error : Errors with program diagnostics " |
---|
| 794 | return;; |
---|
| 795 | 14) echo "rsync error : Error in IPC code " |
---|
| 796 | return;; |
---|
| 797 | 20) echo "rsync error : Received SIGUSR1 or SIGINT " |
---|
| 798 | return;; |
---|
| 799 | 21) echo "rsync error : Some error returned by waitpid() " |
---|
| 800 | return;; |
---|
| 801 | 22) echo "rsync error : Error allocating core memory buffers " |
---|
| 802 | return;; |
---|
| 803 | 23) echo "rsync error : Partial transfer due to error" |
---|
| 804 | return;; |
---|
| 805 | 24) echo "rsync error : Partial transfer due to vanished source files" |
---|
| 806 | return;; |
---|
| 807 | 30) echo "rsync error : Timeout in data send/receive " |
---|
| 808 | return;; |
---|
[719] | 809 | *) echo "rsync error : return code of rsync unknown :" $status |
---|
[623] | 810 | return;; |
---|
| 811 | esac |
---|
| 812 | else |
---|
| 813 | echo "unknown language $MYLANG." |
---|
| 814 | return |
---|
| 815 | fi |
---|
[622] | 816 | } |
---|
| 817 | |
---|
| 818 | #D-#================================================== |
---|
| 819 | #D-function IGCM_sys_Miror_libIGCM |
---|
| 820 | #D-* Purpose: Mirror libIGCM PATH and lib to cesium |
---|
| 821 | #D-* Examples: |
---|
| 822 | #D- |
---|
| 823 | function IGCM_sys_Mirror_libIGCM { |
---|
[623] | 824 | IGCM_debug_PushStack "IGCM_sys_Mirror_libIGCM" |
---|
| 825 | if ( $DEBUG_sys ) ; then |
---|
| 826 | echo "IGCM_sys_Mirror_libIGCM" |
---|
| 827 | fi |
---|
[622] | 828 | |
---|
[715] | 829 | typeset status DEST |
---|
[622] | 830 | |
---|
[623] | 831 | mkdir -p ${HOME}/MIRROR/${PATHlibIGCM} |
---|
[622] | 832 | |
---|
[623] | 833 | echo ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} > out_rsync 2>&1 |
---|
| 834 | ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} >> out_rsync 2>&1 |
---|
[715] | 835 | status=$? |
---|
[622] | 836 | |
---|
[715] | 837 | if [ ${status} -gt 0 ] ; then |
---|
[623] | 838 | echo "IGCM_sys_Mirror_libIGCM Warning : no libIGCM on cesium." |
---|
| 839 | cat out_rsync |
---|
| 840 | fi |
---|
| 841 | IGCM_debug_PopStack "IGCM_sys_Mirror_libIGCM" |
---|
[622] | 842 | } |
---|
| 843 | |
---|
| 844 | #D-#================================================== |
---|
| 845 | #D-function IGCM_sys_Cp |
---|
| 846 | #D-* Purpose: generic cp |
---|
| 847 | #D-* Examples: |
---|
| 848 | #D- |
---|
| 849 | function IGCM_sys_Cp { |
---|
[623] | 850 | IGCM_debug_PushStack "IGCM_sys_Cp" $@ |
---|
| 851 | if ( $DEBUG_sys ) ; then |
---|
| 852 | echo "IGCM_sys_Cp :" $@ |
---|
| 853 | fi |
---|
[622] | 854 | |
---|
[715] | 855 | typeset status |
---|
[622] | 856 | |
---|
[623] | 857 | echo cp $@ > out_rsync 2>&1 |
---|
| 858 | \cp $@ >> out_rsync 2>&1 |
---|
[715] | 859 | status=$? |
---|
[622] | 860 | |
---|
[715] | 861 | if [ ${status} -gt 0 ] ; then |
---|
| 862 | echo "IGCM_sys_Cp : error code ${status}" |
---|
[623] | 863 | cat out_rsync |
---|
| 864 | IGCM_debug_Exit "IGCM_sys_Cp" |
---|
| 865 | else |
---|
| 866 | \rm out_rsync |
---|
| 867 | fi |
---|
| 868 | IGCM_debug_PopStack "IGCM_sys_Cp" |
---|
[622] | 869 | } |
---|
| 870 | |
---|
| 871 | #D-#================================================== |
---|
| 872 | #D-function IGCM_sys_Rm |
---|
| 873 | #D-* Purpose: generic rm |
---|
| 874 | #D-* Examples: |
---|
| 875 | #D- |
---|
| 876 | function IGCM_sys_Rm { |
---|
[623] | 877 | IGCM_debug_PushStack "IGCM_sys_Rm" -- $@ |
---|
| 878 | if ( $DEBUG_sys ) ; then |
---|
| 879 | echo "IGCM_sys_Rm :" $@ |
---|
| 880 | fi |
---|
[622] | 881 | |
---|
[715] | 882 | typeset status |
---|
[622] | 883 | |
---|
[623] | 884 | echo rm $@ > out_rsync 2>&1 |
---|
| 885 | \rm $@ >> out_rsync 2>&1 |
---|
[715] | 886 | status=$? |
---|
[622] | 887 | |
---|
[715] | 888 | if [ ${status} -gt 0 ] ; then |
---|
| 889 | echo "IGCM_sys_Rm : error code ${status}" |
---|
[623] | 890 | cat out_rsync |
---|
| 891 | IGCM_debug_Exit "IGCM_sys_Rm" |
---|
| 892 | else |
---|
| 893 | \rm out_rsync |
---|
| 894 | fi |
---|
| 895 | IGCM_debug_PopStack "IGCM_sys_Rm" |
---|
[622] | 896 | } |
---|
| 897 | |
---|
| 898 | #D-#================================================== |
---|
| 899 | #D-function IGCM_sys_RmRunDir |
---|
| 900 | #D-* Purpose: rm tmpdir (dummy function most of the time batch |
---|
| 901 | #D- scheduler will do the job) |
---|
| 902 | #D-* Examples: |
---|
| 903 | #D- |
---|
| 904 | function IGCM_sys_RmRunDir { |
---|
[623] | 905 | IGCM_debug_PushStack "IGCM_sys_RmRunDir" -- $@ |
---|
| 906 | if ( $DEBUG_sys ) ; then |
---|
| 907 | echo "IGCM_sys_RmRunDir :" $@ |
---|
| 908 | fi |
---|
[622] | 909 | |
---|
[715] | 910 | typeset status |
---|
[622] | 911 | |
---|
[623] | 912 | echo rm $@ > out_rsync 2>&1 |
---|
| 913 | \rm $@ >> out_rsync 2>&1 |
---|
[715] | 914 | status=$? |
---|
[622] | 915 | |
---|
[715] | 916 | if [ ${status} -gt 0 ] ; then |
---|
| 917 | echo "IGCM_sys_RmRunDir : error code ${status}" |
---|
[623] | 918 | cat out_rsync |
---|
| 919 | IGCM_debug_Exit "IGCM_sys_RmRunDir" |
---|
| 920 | else |
---|
| 921 | \rm out_rsync |
---|
| 922 | fi |
---|
| 923 | IGCM_debug_PopStack "IGCM_sys_RmRunDir" |
---|
[622] | 924 | } |
---|
| 925 | |
---|
| 926 | #D-#================================================== |
---|
| 927 | #D-function IGCM_sys_Mv |
---|
| 928 | #D-* Purpose: generic move |
---|
| 929 | #D-* Examples: |
---|
| 930 | #D- |
---|
| 931 | function IGCM_sys_Mv { |
---|
[623] | 932 | IGCM_debug_PushStack "IGCM_sys_Mv" $@ |
---|
| 933 | if ( $DEBUG_sys ) ; then |
---|
| 934 | echo "IGCM_sys_Mv :" $@ |
---|
| 935 | fi |
---|
[622] | 936 | |
---|
[623] | 937 | if [ $DRYRUN = 0 ]; then |
---|
[622] | 938 | |
---|
[715] | 939 | typeset status |
---|
[623] | 940 | |
---|
| 941 | echo mv $@ > out_rsync 2>&1 |
---|
| 942 | \mv $@ >> out_rsync 2>&1 |
---|
[715] | 943 | status=$? |
---|
[623] | 944 | |
---|
[715] | 945 | if [ ${status} -gt 0 ] ; then |
---|
| 946 | echo "IGCM_sys_Mv : error code ${status}" |
---|
[623] | 947 | cat out_rsync |
---|
| 948 | IGCM_debug_Exit "IGCM_sys_Mv" |
---|
[622] | 949 | else |
---|
[623] | 950 | \rm out_rsync |
---|
[622] | 951 | fi |
---|
[623] | 952 | else |
---|
| 953 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 954 | fi |
---|
[622] | 955 | |
---|
[623] | 956 | IGCM_debug_PopStack "IGCM_sys_Mv" |
---|
[622] | 957 | } |
---|
| 958 | |
---|
| 959 | #D-#================================================== |
---|
| 960 | #D-function IGCM_sys_Put_Dir |
---|
| 961 | #D-* Purpose: Copy a complete directory on $(ARCHIVE) |
---|
| 962 | #D-* Examples: |
---|
| 963 | #D- |
---|
| 964 | function IGCM_sys_Put_Dir { |
---|
[623] | 965 | IGCM_debug_PushStack "IGCM_sys_Put_Dir" $@ |
---|
| 966 | if ( $DEBUG_sys ) ; then |
---|
| 967 | echo "IGCM_sys_Put_Dir :" $@ |
---|
| 968 | fi |
---|
| 969 | if [ $DRYRUN = 0 ]; then |
---|
| 970 | if [ ! -d ${1} ] ; then |
---|
| 971 | echo "WARNING : IGCM_sys_Put_Dir ${1} DOES NOT EXIST ." |
---|
| 972 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
| 973 | return |
---|
[622] | 974 | fi |
---|
| 975 | |
---|
[715] | 976 | typeset status |
---|
[622] | 977 | |
---|
[623] | 978 | # Only if we use rsync |
---|
| 979 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 980 | # |
---|
| 981 | #USUAL WAY |
---|
| 982 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
[715] | 983 | status=$? |
---|
[622] | 984 | |
---|
[715] | 985 | if [ ${status} -gt 0 ] ; then |
---|
| 986 | echo "IGCM_sys_Put_Dir : error code ${status}" |
---|
[623] | 987 | cat out_rsync |
---|
| 988 | IGCM_debug_Exit "IGCM_sys_Put_Dir" |
---|
[622] | 989 | else |
---|
[623] | 990 | \rm out_rsync |
---|
[622] | 991 | fi |
---|
[623] | 992 | else |
---|
| 993 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 994 | fi |
---|
| 995 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
[622] | 996 | } |
---|
| 997 | |
---|
| 998 | #D-#================================================== |
---|
| 999 | #D-function IGCM_sys_Get_Dir |
---|
[623] | 1000 | #D-* Purpose: Copy a complete directory from ${ARCHIVE} |
---|
[622] | 1001 | #D-* Examples: |
---|
| 1002 | #D- |
---|
| 1003 | function IGCM_sys_Get_Dir { |
---|
[623] | 1004 | IGCM_debug_PushStack "IGCM_sys_Get_Dir" $@ |
---|
| 1005 | if ( $DEBUG_sys ) ; then |
---|
| 1006 | echo "IGCM_sys_Get_Dir :" $@ |
---|
| 1007 | fi |
---|
| 1008 | if [ $DRYRUN = 0 ]; then |
---|
| 1009 | # if [ ! -d ${1} ] ; then |
---|
| 1010 | # echo "WARNING : IGCM_sys_Get_Dir ${1} DOES NOT EXIST ." |
---|
| 1011 | # IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
| 1012 | # return |
---|
| 1013 | # fi |
---|
[622] | 1014 | |
---|
[708] | 1015 | typeset NB_ESSAI DELAI status i |
---|
| 1016 | # number of tentative |
---|
| 1017 | NB_ESSAI=3 |
---|
| 1018 | # time delay between tentative |
---|
| 1019 | DELAI=2 |
---|
[622] | 1020 | |
---|
[676] | 1021 | # Only if we use rsync |
---|
| 1022 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 1023 | # |
---|
[708] | 1024 | # USUAL WAY |
---|
| 1025 | # add 'ccc_hsm get' (to demigrate all offline files) to reduce time of this command : |
---|
[713] | 1026 | ccc_hsm get -r $1 |
---|
[622] | 1027 | |
---|
[709] | 1028 | i=0 |
---|
[708] | 1029 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1030 | \cp -ur $1 $2 >> out_rsync 2>&1 |
---|
| 1031 | status=$? |
---|
| 1032 | if [ ${status} -gt 0 ]; then |
---|
[713] | 1033 | IGCM_debug_Print 2 "IGCM_sys_Get_Dir : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
[708] | 1034 | IGCM_debug_Print 2 "IGCM_sys_Get_Dir : sleep ${DELAI} seconds and try again." |
---|
| 1035 | sleep $DELAI |
---|
| 1036 | else |
---|
| 1037 | break |
---|
| 1038 | fi |
---|
| 1039 | (( i = i + 1 )) |
---|
| 1040 | done |
---|
| 1041 | |
---|
| 1042 | if [ ${status} -gt 0 ] ; then |
---|
[623] | 1043 | echo "IGCM_sys_Get_Dir : error." |
---|
| 1044 | cat out_rsync |
---|
| 1045 | IGCM_debug_Exit "IGCM_sys_Get_Dir" |
---|
[622] | 1046 | else |
---|
[623] | 1047 | \rm out_rsync |
---|
[622] | 1048 | fi |
---|
[623] | 1049 | else |
---|
| 1050 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1051 | fi |
---|
| 1052 | IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
[622] | 1053 | } |
---|
| 1054 | |
---|
| 1055 | #D-#================================================== |
---|
| 1056 | #D-function IGCM_sys_Get_Master |
---|
| 1057 | #D-* Purpose: Copy a complete directory from MASTER filesystem |
---|
| 1058 | #D-* Examples: |
---|
| 1059 | #D- |
---|
| 1060 | function IGCM_sys_Get_Master { |
---|
[623] | 1061 | IGCM_debug_PushStack "IGCM_sys_Get_Master" $@ |
---|
| 1062 | if ( $DEBUG_sys ) ; then |
---|
| 1063 | echo "IGCM_sys_Get_Master :" $@ |
---|
| 1064 | fi |
---|
| 1065 | if [ $DRYRUN = 0 ]; then |
---|
[640] | 1066 | if ( [ ! -d ${1} ] && [ ! -f ${1} ] ) ; then |
---|
[623] | 1067 | echo "WARNING : IGCM_sys_Get_Master ${1} DOES NOT EXIST ." |
---|
| 1068 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
| 1069 | return |
---|
[622] | 1070 | fi |
---|
| 1071 | |
---|
[708] | 1072 | typeset NB_ESSAI DELAI status i |
---|
| 1073 | # number of tentative |
---|
| 1074 | NB_ESSAI=3 |
---|
| 1075 | # time delay between tentative |
---|
| 1076 | DELAI=2 |
---|
[622] | 1077 | |
---|
[709] | 1078 | i=0 |
---|
[708] | 1079 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1080 | \cp -urL $1 $2 > out_rsync 2>&1 |
---|
| 1081 | status=$? |
---|
| 1082 | if [ ${status} -gt 0 ]; then |
---|
[713] | 1083 | IGCM_debug_Print 2 "IGCM_sys_Get_Master : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
[708] | 1084 | IGCM_debug_Print 2 "IGCM_sys_Get_Master : sleep ${DELAI} seconds and try again." |
---|
| 1085 | sleep $DELAI |
---|
| 1086 | else |
---|
| 1087 | break |
---|
| 1088 | fi |
---|
| 1089 | (( i = i + 1 )) |
---|
| 1090 | done |
---|
[622] | 1091 | |
---|
[708] | 1092 | if [ ${status} -gt 0 ] ; then |
---|
[623] | 1093 | echo "IGCM_sys_Get_Master : error." |
---|
| 1094 | cat out_rsync |
---|
| 1095 | IGCM_debug_Exit "IGCM_sys_Get_Master" |
---|
[622] | 1096 | else |
---|
[623] | 1097 | \rm out_rsync |
---|
[622] | 1098 | fi |
---|
[623] | 1099 | else |
---|
| 1100 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1101 | fi |
---|
| 1102 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
[622] | 1103 | } |
---|
| 1104 | |
---|
[689] | 1105 | #==================================================== |
---|
| 1106 | #- Call IGCM_sys_Mirror_libIGCM now ! |
---|
| 1107 | if ( $MirrorlibIGCM ) ; then |
---|
| 1108 | IGCM_sys_Mirror_libIGCM |
---|
| 1109 | fi |
---|
| 1110 | |
---|
[622] | 1111 | #D-#================================================== |
---|
| 1112 | #D-function IGCM_sys_Put_Rest |
---|
[623] | 1113 | #D-* Purpose: Put computied restarts on ${ARCHIVE}. |
---|
[622] | 1114 | #D- File and target directory must exist. |
---|
| 1115 | #D-* Examples: |
---|
| 1116 | #D- |
---|
| 1117 | function IGCM_sys_Put_Rest { |
---|
[623] | 1118 | IGCM_debug_PushStack "IGCM_sys_Put_Rest" $@ |
---|
| 1119 | if ( $DEBUG_sys ) ; then |
---|
| 1120 | echo "IGCM_sys_Put_Rest :" $@ |
---|
| 1121 | fi |
---|
| 1122 | if [ $DRYRUN = 0 ]; then |
---|
| 1123 | if [ ! -f ${1} ] ; then |
---|
| 1124 | echo "ERROR : IGCM_sys_Put_Rest ${1} DOES NOT EXIST ." |
---|
| 1125 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
[622] | 1126 | fi |
---|
| 1127 | |
---|
[715] | 1128 | typeset status |
---|
[623] | 1129 | # |
---|
| 1130 | if [ X${JobType} = XRUN ] ; then |
---|
| 1131 | IGCM_sys_Chmod 444 ${1} |
---|
| 1132 | fi |
---|
[622] | 1133 | |
---|
[623] | 1134 | # |
---|
| 1135 | # USUAL WAY |
---|
| 1136 | \cp $1 $2 > out_rsync 2>&1 |
---|
[715] | 1137 | status=$? |
---|
[622] | 1138 | |
---|
[623] | 1139 | # #RSYNC WITH NETWORK SSH CALL |
---|
| 1140 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1 |
---|
| 1141 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1 |
---|
[622] | 1142 | |
---|
[623] | 1143 | # #RSYNC WITH NFS USE |
---|
| 1144 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 1145 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
[622] | 1146 | |
---|
[715] | 1147 | # status=$? |
---|
| 1148 | # IGCM_sys_Rsync_out $status |
---|
[622] | 1149 | |
---|
[623] | 1150 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
[715] | 1151 | # (( status=status+$? )) |
---|
[623] | 1152 | |
---|
[715] | 1153 | if [ ${status} -gt 0 ] ; then |
---|
| 1154 | echo "IGCM_sys_Put_Rest : cp failed error code ${status}" |
---|
[623] | 1155 | cat out_rsync |
---|
| 1156 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
[622] | 1157 | else |
---|
[623] | 1158 | \rm out_rsync |
---|
[622] | 1159 | fi |
---|
[623] | 1160 | else |
---|
| 1161 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1162 | fi |
---|
| 1163 | IGCM_debug_PopStack "IGCM_sys_Put_Rest" |
---|
[622] | 1164 | } |
---|
| 1165 | |
---|
| 1166 | #D-#================================================== |
---|
[623] | 1167 | #D-function IGCM_sys_PutBuffer_Rest |
---|
| 1168 | #D-* Purpose: Put computied restarts on ${SCRATCHDIR}. |
---|
| 1169 | #D- File and target directory must exist. |
---|
| 1170 | #D-* Examples: |
---|
| 1171 | #D- |
---|
| 1172 | function IGCM_sys_PutBuffer_Rest { |
---|
| 1173 | IGCM_debug_PushStack "IGCM_sys_PutBuffer_Rest" $@ |
---|
| 1174 | if ( $DEBUG_sys ) ; then |
---|
| 1175 | echo "IGCM_sys_PutBuffer_Rest :" $@ |
---|
| 1176 | fi |
---|
| 1177 | if [ $DRYRUN = 0 ]; then |
---|
| 1178 | if [ ! -f ${1} ] ; then |
---|
| 1179 | echo "ERROR : IGCM_sys_PutBuffer_Rest ${1} DOES NOT EXIST ." |
---|
| 1180 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest" |
---|
| 1181 | fi |
---|
| 1182 | |
---|
[715] | 1183 | typeset status |
---|
[623] | 1184 | # |
---|
| 1185 | if [ X${JobType} = XRUN ] ; then |
---|
| 1186 | IGCM_sys_Chmod 444 ${1} |
---|
| 1187 | fi |
---|
| 1188 | |
---|
| 1189 | # |
---|
| 1190 | # USUAL WAY |
---|
| 1191 | \cp $1 $2 > out_rsync 2>&1 |
---|
[715] | 1192 | status=$? |
---|
[623] | 1193 | |
---|
[715] | 1194 | if [ ${status} -gt 0 ] ; then |
---|
| 1195 | echo "IGCM_sys_PutBuffer_Rest : error code ${status}" |
---|
[623] | 1196 | cat out_rsync |
---|
| 1197 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest" |
---|
| 1198 | else |
---|
| 1199 | \rm out_rsync |
---|
| 1200 | fi |
---|
| 1201 | else |
---|
| 1202 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1203 | fi |
---|
| 1204 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Rest" |
---|
| 1205 | } |
---|
| 1206 | |
---|
| 1207 | #D-#================================================== |
---|
[622] | 1208 | #D-function IGCM_sys_Put_Out |
---|
[623] | 1209 | #D-* Purpose: Copy a file on ${ARCHIVE} after having chmod it in readonly |
---|
[622] | 1210 | #D-* Examples: |
---|
| 1211 | #D- |
---|
| 1212 | function IGCM_sys_Put_Out { |
---|
[623] | 1213 | IGCM_debug_PushStack "IGCM_sys_Put_Out" $@ |
---|
| 1214 | if ( $DEBUG_sys ) ; then |
---|
| 1215 | echo "IGCM_sys_Put_Out :" $@ |
---|
| 1216 | fi |
---|
[667] | 1217 | |
---|
[711] | 1218 | typeset NB_ESSAI DELAI status i exist skip |
---|
[667] | 1219 | |
---|
| 1220 | # number of tentative |
---|
[668] | 1221 | NB_ESSAI=3 |
---|
[667] | 1222 | # time delay between tentative |
---|
[668] | 1223 | DELAI=2 |
---|
[667] | 1224 | |
---|
[623] | 1225 | if [ $DRYRUN = 0 ]; then |
---|
| 1226 | if [ ! -f ${1} ] ; then |
---|
| 1227 | echo "WARNING : IGCM_sys_Put_Out ${1} DOES NOT EXIST ." |
---|
| 1228 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 1229 | return 1 |
---|
[622] | 1230 | fi |
---|
[623] | 1231 | # |
---|
| 1232 | IGCM_sys_MkdirArchive $( dirname $2 ) |
---|
| 1233 | # |
---|
[622] | 1234 | |
---|
[623] | 1235 | #===================================================== |
---|
| 1236 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
| 1237 | #===================================================== |
---|
[622] | 1238 | |
---|
[623] | 1239 | #echo ${2} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
| 1240 | #if [ $? -eq 0 ] ; then |
---|
| 1241 | # typeset WORKPATH FILEPATH |
---|
| 1242 | # WORKPATH=$( dirname $2 | sed -e "s|${R_OUT}|${R_BUF}|" ) |
---|
| 1243 | # IGCM_sys_MkdirWork ${WORKPATH} |
---|
| 1244 | # FILEPATH=${WORKPATH}/$( basename $2 ) |
---|
| 1245 | # # |
---|
| 1246 | # IGCM_sys_Cp ${1} ${FILEPATH} |
---|
| 1247 | #fi |
---|
[622] | 1248 | |
---|
[623] | 1249 | if [ X${JobType} = XRUN ] ; then |
---|
| 1250 | if [ X${3} = X ] ; then |
---|
| 1251 | IGCM_sys_Chmod 444 ${1} |
---|
| 1252 | fi |
---|
| 1253 | fi |
---|
| 1254 | # |
---|
[667] | 1255 | |
---|
[711] | 1256 | exist=false |
---|
| 1257 | skip=false |
---|
| 1258 | if [ -f $2 ] ; then |
---|
| 1259 | IGCM_debug_Print 1 "$2 already exist" |
---|
| 1260 | #dmget $2 |
---|
| 1261 | ccc_hsm get $2 |
---|
| 1262 | exist=true |
---|
| 1263 | if [ "X$( diff $1 $2 )" = X ] ; then |
---|
| 1264 | IGCM_debug_Print 2 "$1 and $2 are the same file, we skip the copy" |
---|
| 1265 | skip=true |
---|
[667] | 1266 | else |
---|
[711] | 1267 | IGCM_debug_Print 2 "$1 and $2 are not the same file, we force the copy" |
---|
| 1268 | skip=false |
---|
[667] | 1269 | fi |
---|
[711] | 1270 | fi |
---|
| 1271 | # |
---|
| 1272 | if ( [ X${exist} = Xtrue ] && [ X${skip} = Xfalse ] ) ; then |
---|
| 1273 | IGCM_sys_Chmod u+w $2 |
---|
| 1274 | fi |
---|
[622] | 1275 | |
---|
[711] | 1276 | if [ X${skip} = Xfalse ] ; then |
---|
[719] | 1277 | i=0 |
---|
[711] | 1278 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1279 | # USUAL WAY |
---|
| 1280 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 1281 | status=$? |
---|
| 1282 | if [ ${status} -gt 0 ]; then |
---|
[713] | 1283 | IGCM_debug_Print 2 "IGCM_sys_Put_Out : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
[711] | 1284 | IGCM_debug_Print 2 "IGCM_sys_Put_Out : sleep ${DELAI} seconds and try again." |
---|
| 1285 | sleep $DELAI |
---|
| 1286 | else |
---|
| 1287 | break |
---|
| 1288 | fi |
---|
| 1289 | (( i = i + 1 )) |
---|
| 1290 | done |
---|
| 1291 | fi |
---|
| 1292 | |
---|
[623] | 1293 | # #RSYNC WITH NETWORK SSH CALL |
---|
| 1294 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1 |
---|
| 1295 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1 |
---|
[622] | 1296 | |
---|
[623] | 1297 | # #RSYNC WITH NFS USE |
---|
| 1298 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 1299 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
[622] | 1300 | |
---|
[711] | 1301 | # status=$? |
---|
| 1302 | # IGCM_sys_Rsync_out $status |
---|
[622] | 1303 | |
---|
[623] | 1304 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
[711] | 1305 | # (( status=status+$? )) |
---|
[622] | 1306 | |
---|
[711] | 1307 | if [ ${status} -gt 0 ] ; then |
---|
[623] | 1308 | echo "IGCM_sys_Put_Out : error." |
---|
| 1309 | cat out_rsync |
---|
| 1310 | IGCM_debug_Exit "IGCM_sys_Put_Out" |
---|
[622] | 1311 | else |
---|
[623] | 1312 | \rm out_rsync |
---|
[622] | 1313 | fi |
---|
[623] | 1314 | else |
---|
| 1315 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1316 | fi |
---|
| 1317 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 1318 | return 0 |
---|
[622] | 1319 | } |
---|
| 1320 | |
---|
| 1321 | #D-#================================================== |
---|
[623] | 1322 | #D-function IGCM_sys_PutBuffer_Out |
---|
| 1323 | #D-* Purpose: Copy a file on ${SCRATCHDIR} after having chmod it in readonly |
---|
| 1324 | #D-* Examples: |
---|
| 1325 | #D- |
---|
| 1326 | function IGCM_sys_PutBuffer_Out { |
---|
| 1327 | IGCM_debug_PushStack "IGCM_sys_PutBuffer_Out" $@ |
---|
| 1328 | if ( $DEBUG_sys ) ; then |
---|
| 1329 | echo "IGCM_sys_PutBuffer_Out :" $@ |
---|
| 1330 | fi |
---|
[711] | 1331 | |
---|
| 1332 | typeset NB_ESSAI DELAI status i exist skip |
---|
| 1333 | |
---|
| 1334 | # number of tentative |
---|
| 1335 | NB_ESSAI=3 |
---|
| 1336 | # time delay between tentative |
---|
| 1337 | DELAI=2 |
---|
| 1338 | |
---|
[623] | 1339 | if [ $DRYRUN = 0 ]; then |
---|
| 1340 | if [ ! -f ${1} ] ; then |
---|
| 1341 | echo "WARNING : IGCM_sys_PutBuffer_Out ${1} DOES NOT EXIST ." |
---|
| 1342 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out" |
---|
| 1343 | return 1 |
---|
| 1344 | fi |
---|
| 1345 | # |
---|
| 1346 | IGCM_sys_Mkdir $( dirname $2 ) |
---|
| 1347 | # |
---|
| 1348 | |
---|
| 1349 | if [ X${JobType} = XRUN ] ; then |
---|
| 1350 | if [ X${3} = X ] ; then |
---|
| 1351 | IGCM_sys_Chmod 444 ${1} |
---|
| 1352 | fi |
---|
| 1353 | fi |
---|
[711] | 1354 | |
---|
| 1355 | exist=false |
---|
| 1356 | skip=false |
---|
| 1357 | if [ -f $2 ] ; then |
---|
| 1358 | IGCM_debug_Print 1 "$2 already exist" |
---|
| 1359 | exist=true |
---|
| 1360 | if [ "X$( diff $1 $2 )" = X ] ; then |
---|
| 1361 | IGCM_debug_Print 2 "$1 and $2 are the same file, we skip the copy" |
---|
| 1362 | skip=true |
---|
| 1363 | else |
---|
| 1364 | IGCM_debug_Print 2 "$1 and $2 are not the same file, we force the copy" |
---|
| 1365 | skip=false |
---|
| 1366 | fi |
---|
| 1367 | fi |
---|
[623] | 1368 | # |
---|
[711] | 1369 | if ( [ X${exist} = Xtrue ] && [ X${skip} = Xfalse ] ) ; then |
---|
| 1370 | IGCM_sys_Chmod u+w $2 |
---|
| 1371 | fi |
---|
[623] | 1372 | |
---|
[711] | 1373 | if [ X${skip} = Xfalse ] ; then |
---|
| 1374 | i=0 |
---|
| 1375 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1376 | # USUAL WAY |
---|
| 1377 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 1378 | status=$? |
---|
| 1379 | if [ ${status} -gt 0 ]; then |
---|
[713] | 1380 | IGCM_debug_Print 2 "IGCM_sys_PutBuffer_Out : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
[711] | 1381 | IGCM_debug_Print 2 "IGCM_sys_PutBuffer_Out : sleep ${DELAI} seconds and try again." |
---|
| 1382 | sleep $DELAI |
---|
| 1383 | else |
---|
| 1384 | break |
---|
| 1385 | fi |
---|
| 1386 | (( i = i + 1 )) |
---|
| 1387 | done |
---|
| 1388 | fi |
---|
| 1389 | |
---|
| 1390 | if [ ${status} -gt 0 ] ; then |
---|
[623] | 1391 | echo "IGCM_sys_PutBuffer_Out : error." |
---|
| 1392 | cat out_rsync |
---|
| 1393 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Out" |
---|
| 1394 | else |
---|
| 1395 | \rm out_rsync |
---|
| 1396 | fi |
---|
| 1397 | else |
---|
| 1398 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1399 | fi |
---|
| 1400 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out" |
---|
| 1401 | return 0 |
---|
| 1402 | } |
---|
| 1403 | |
---|
| 1404 | #D-#================================================== |
---|
[622] | 1405 | #D-function IGCM_sys_Get |
---|
| 1406 | #D-* Purpose: Get a file from ${ARCHIVE} |
---|
| 1407 | #D-* Examples: IGCM_sys_Get myfile /destpath/myfile_with_PREFIX |
---|
| 1408 | #D- IGCM_sys_Get /l Array_contain_myfiles /destpath/ |
---|
| 1409 | function IGCM_sys_Get { |
---|
[623] | 1410 | IGCM_debug_PushStack "IGCM_sys_Get" $@ |
---|
[622] | 1411 | |
---|
[719] | 1412 | typeset DEST dm_liste ifile target file_work |
---|
[667] | 1413 | typeset NB_ESSAI DELAI status i |
---|
[622] | 1414 | |
---|
[623] | 1415 | if ( $DEBUG_sys ) ; then |
---|
| 1416 | echo "IGCM_sys_Get :" $@ |
---|
| 1417 | fi |
---|
[667] | 1418 | |
---|
| 1419 | # number of tentative |
---|
[668] | 1420 | NB_ESSAI=3 |
---|
[667] | 1421 | # time delay between tentative |
---|
[668] | 1422 | DELAI=2 |
---|
[667] | 1423 | |
---|
[623] | 1424 | if [ $DRYRUN -le 2 ]; then |
---|
| 1425 | if [ X${1} = X'/l' ] ; then |
---|
| 1426 | # test if the first file is present in the old computation : |
---|
| 1427 | eval set +A dm_liste \${${2}} |
---|
| 1428 | else |
---|
| 1429 | eval set +A dm_liste ${1} |
---|
[622] | 1430 | fi |
---|
[623] | 1431 | eval DEST=\${${#}} |
---|
[622] | 1432 | |
---|
[623] | 1433 | #===================================================== |
---|
| 1434 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
| 1435 | #===================================================== |
---|
[622] | 1436 | |
---|
[623] | 1437 | # Is it an R_OUT file (not R_IN) ? |
---|
| 1438 | #echo ${dm_liste[0]} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
| 1439 | #if [ $? -eq 0 ] ; then |
---|
| 1440 | # # Yes ? then we try to get it in SCRATCHDIR |
---|
| 1441 | # set +A file_work $( echo ${dm_liste[*]} | sed -e "s|${R_OUT}|${R_BUF}|g" ) |
---|
| 1442 | # if [ -f ${file_work[0]} ] ; then |
---|
| 1443 | # IGCM_sys_Cp ${file_work[*]} ${DEST} |
---|
| 1444 | # IGCM_debug_PopStack "IGCM_sys_Get" |
---|
| 1445 | # return |
---|
| 1446 | # fi |
---|
| 1447 | #fi |
---|
[622] | 1448 | |
---|
[623] | 1449 | ccc_hsm get ${dm_liste[*]} > out_rsync 2>&1 |
---|
[715] | 1450 | status=$? |
---|
| 1451 | if [ ${status} -gt 0 ] ; then |
---|
| 1452 | echo "WARNING IGCM_sys_Get : error code ${status}" |
---|
[623] | 1453 | cat out_rsync |
---|
| 1454 | echo "WARNING IGCM_sys_Get : will stop later if the cp fails." |
---|
| 1455 | fi |
---|
[622] | 1456 | |
---|
[715] | 1457 | #if [ ${status} -gt 0 ] ; then |
---|
[623] | 1458 | # if [ ! "X$( grep "Lost dmusrcmd connection" out_rsync )" = "X" ] ; then |
---|
| 1459 | # cat out_rsync |
---|
| 1460 | # echo "WARNING IGCM_sys_Get : Lost dmusrcmd connection : " |
---|
| 1461 | # sleep 30 |
---|
| 1462 | # echo "We try another time" |
---|
| 1463 | ## dmget ${dm_liste[*]} > out_rsync 2>&1 |
---|
| 1464 | # ccc_hsm get ${dm_liste[*]} > out_rsync 2>&1 |
---|
[715] | 1465 | # status=$? |
---|
| 1466 | # if [ ${status} -gt 0 ] ; then |
---|
[623] | 1467 | # echo "ERROR IGCM_sys_Get : again demigration error :" |
---|
| 1468 | # cat out_rsync |
---|
| 1469 | # IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1470 | # fi |
---|
| 1471 | # else |
---|
| 1472 | # echo "ERROR IGCM_sys_Get : demigration error :" |
---|
| 1473 | # cat out_rsync |
---|
| 1474 | # IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1475 | # fi |
---|
| 1476 | #fi |
---|
[622] | 1477 | |
---|
[719] | 1478 | # #RSYNC WITH NETWORK SSH CALL |
---|
| 1479 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 1480 | # ${RSYNC} ${RSYNC_opt} -e ssh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
| 1481 | |
---|
| 1482 | # #RSYNC WITH NFS USE |
---|
| 1483 | # echo ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 1484 | # ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
| 1485 | |
---|
| 1486 | # status=$? |
---|
| 1487 | # IGCM_sys_Rsync_out $status |
---|
| 1488 | |
---|
| 1489 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 1490 | # (( status=status+$? )) |
---|
| 1491 | |
---|
[623] | 1492 | #USUAL WAY |
---|
| 1493 | if [ X${1} = X'/l' ] ; then |
---|
| 1494 | for target in ${dm_liste[*]} ; do |
---|
| 1495 | local_file=$( basename ${target} ) |
---|
[668] | 1496 | # test if the target file is present before the loop |
---|
| 1497 | IGCM_sys_TestFileArchive ${target} |
---|
[715] | 1498 | status=$? |
---|
| 1499 | if [ ${status} -gt 0 ] ; then |
---|
[701] | 1500 | echo "IGCM_sys_Get, ERROR : regular file ${target} DOES NOT EXIST ." |
---|
[668] | 1501 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1502 | else |
---|
[719] | 1503 | i=0 |
---|
[668] | 1504 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1505 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
| 1506 | status=$? |
---|
| 1507 | if [ ${status} -gt 0 ]; then |
---|
[713] | 1508 | IGCM_debug_Print 2 "IGCM_sys_Get : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
[676] | 1509 | IGCM_debug_Print 2 "IGCM_sys_Get : sleep ${DELAI} seconds and try again." |
---|
| 1510 | sleep $DELAI |
---|
[668] | 1511 | else |
---|
[676] | 1512 | break |
---|
[668] | 1513 | fi |
---|
| 1514 | (( i = i + 1 )) |
---|
| 1515 | done |
---|
[719] | 1516 | if [ ${status} -gt 0 ] ; then |
---|
| 1517 | echo "IGCM_sys_Get : error" |
---|
| 1518 | cat out_rsync |
---|
| 1519 | \rm out_rsync |
---|
| 1520 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1521 | else |
---|
| 1522 | \rm out_rsync |
---|
| 1523 | fi |
---|
[668] | 1524 | fi |
---|
[623] | 1525 | done |
---|
| 1526 | else |
---|
[719] | 1527 | i=0 |
---|
| 1528 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1529 | \cp ${dm_liste} ${DEST} >> out_rsync 2>&1 |
---|
| 1530 | status=$? |
---|
| 1531 | if [ ${status} -gt 0 ]; then |
---|
| 1532 | IGCM_debug_Print 2 "IGCM_sys_Get : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
| 1533 | IGCM_debug_Print 2 "IGCM_sys_Get : sleep ${DELAI} seconds and try again." |
---|
| 1534 | sleep $DELAI |
---|
| 1535 | else |
---|
| 1536 | break |
---|
| 1537 | fi |
---|
| 1538 | (( i = i + 1 )) |
---|
| 1539 | done |
---|
| 1540 | if [ ${status} -gt 0 ] ; then |
---|
| 1541 | echo "IGCM_sys_Get : error" |
---|
| 1542 | cat out_rsync |
---|
| 1543 | \rm out_rsync |
---|
| 1544 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1545 | else |
---|
| 1546 | \rm out_rsync |
---|
| 1547 | fi |
---|
[623] | 1548 | fi |
---|
| 1549 | else |
---|
| 1550 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1551 | fi |
---|
| 1552 | IGCM_debug_PopStack "IGCM_sys_Get" |
---|
| 1553 | } |
---|
[622] | 1554 | |
---|
[623] | 1555 | #D-#================================================== |
---|
| 1556 | #D-function IGCM_sys_GetBuffer |
---|
| 1557 | #D-* Purpose: Get a file from ${SCRATCHDIR} |
---|
| 1558 | #D-* Examples: IGCM_sys_GetBuffer myfile /destpath/myfile_with_PREFIX |
---|
| 1559 | #D- IGCM_sys_GetBuffer /l Array_contain_myfiles /destpath/ |
---|
| 1560 | function IGCM_sys_GetBuffer { |
---|
| 1561 | IGCM_debug_PushStack "IGCM_sys_GetBuffer" $@ |
---|
| 1562 | |
---|
[719] | 1563 | typeset DEST buf_liste ifile target file_work |
---|
| 1564 | typeset NB_ESSAI DELAI status i |
---|
[623] | 1565 | |
---|
| 1566 | if ( $DEBUG_sys ) ; then |
---|
| 1567 | echo "IGCM_sys_GetBuffer :" $@ |
---|
| 1568 | fi |
---|
[719] | 1569 | |
---|
| 1570 | # number of tentative |
---|
| 1571 | NB_ESSAI=3 |
---|
| 1572 | # time delay between tentative |
---|
| 1573 | DELAI=2 |
---|
| 1574 | |
---|
[623] | 1575 | if [ $DRYRUN -le 2 ]; then |
---|
| 1576 | if [ X${1} = X'/l' ] ; then |
---|
| 1577 | # test if the first file is present in the old computation : |
---|
| 1578 | eval set +A buf_liste \${${2}} |
---|
[622] | 1579 | else |
---|
[623] | 1580 | eval set +A buf_liste ${1} |
---|
[622] | 1581 | fi |
---|
[623] | 1582 | eval DEST=\${${#}} |
---|
| 1583 | |
---|
| 1584 | #USUAL WAY |
---|
| 1585 | if [ X${1} = X'/l' ] ; then |
---|
| 1586 | for target in ${buf_liste[*]} ; do |
---|
| 1587 | local_file=$( basename ${target} ) |
---|
[719] | 1588 | i=0 |
---|
| 1589 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1590 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
| 1591 | status=$? |
---|
| 1592 | if [ ${status} -gt 0 ]; then |
---|
| 1593 | IGCM_debug_Print 2 "IGCM_sys_GetBuffer : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
| 1594 | IGCM_debug_Print 2 "IGCM_sys_GetBuffer : sleep ${DELAI} seconds and try again." |
---|
| 1595 | sleep $DELAI |
---|
| 1596 | else |
---|
| 1597 | break |
---|
| 1598 | fi |
---|
| 1599 | (( i = i + 1 )) |
---|
| 1600 | done |
---|
| 1601 | if [ ${status} -gt 0 ] ; then |
---|
| 1602 | echo "IGCM_sys_Get : error" |
---|
| 1603 | cat out_rsync |
---|
| 1604 | \rm out_rsync |
---|
| 1605 | IGCM_debug_Exit "IGCM_sys_GetBuffer" |
---|
| 1606 | else |
---|
| 1607 | \rm out_rsync |
---|
| 1608 | fi |
---|
[623] | 1609 | done |
---|
| 1610 | else |
---|
[719] | 1611 | i=0 |
---|
| 1612 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1613 | \cp ${buf_liste} ${DEST} >> out_rsync 2>&1 |
---|
| 1614 | status=$? |
---|
| 1615 | if [ ${status} -gt 0 ]; then |
---|
| 1616 | IGCM_debug_Print 2 "IGCM_sys_GetBuffer : cp failed error code ${status} ${i}/${NB_ESSAI}" |
---|
| 1617 | IGCM_debug_Print 2 "IGCM_sys_GetBuffer : sleep ${DELAI} seconds and try again." |
---|
| 1618 | sleep $DELAI |
---|
| 1619 | else |
---|
| 1620 | break |
---|
| 1621 | fi |
---|
| 1622 | (( i = i + 1 )) |
---|
| 1623 | done |
---|
| 1624 | if [ ${status} -gt 0 ] ; then |
---|
| 1625 | echo "IGCM_sys_Get : error" |
---|
| 1626 | cat out_rsync |
---|
| 1627 | \rm out_rsync |
---|
| 1628 | IGCM_debug_Exit "IGCM_sys_GetBuffer" |
---|
| 1629 | else |
---|
| 1630 | \rm out_rsync |
---|
| 1631 | fi |
---|
[623] | 1632 | fi |
---|
| 1633 | else |
---|
| 1634 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1635 | fi |
---|
| 1636 | IGCM_debug_PopStack "IGCM_sys_GetBuffer" |
---|
[622] | 1637 | } |
---|
| 1638 | |
---|
| 1639 | #D-#================================================== |
---|
| 1640 | #D-function IGCM_sys_GetDate_FichWork |
---|
| 1641 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem WORK |
---|
| 1642 | #D-* Examples: |
---|
| 1643 | #D- |
---|
| 1644 | function IGCM_sys_GetDate_FichWork { |
---|
[623] | 1645 | IGCM_debug_PushStack "IGCM_sys_FichWork" $@ |
---|
| 1646 | if ( $DEBUG_sys ) ; then |
---|
| 1647 | echo "IGCM_sys_GetDate_FichWork :" $@ |
---|
| 1648 | fi |
---|
| 1649 | typeset dateF |
---|
| 1650 | set +A dateF -- $( ls -l --full-time --time-style='+%Y%m%d%H%M%S' ${1} ) |
---|
| 1651 | eval ${2}=${dateF[5]} |
---|
| 1652 | |
---|
[622] | 1653 | # donne la date filesys d'un fichier sur la machine work |
---|
[623] | 1654 | IGCM_debug_PopStack "IGCM_sys_FichWork" |
---|
[622] | 1655 | } |
---|
| 1656 | |
---|
| 1657 | #D-#================================================== |
---|
| 1658 | #D-function IGCM_sys_GetDate_FichArchive |
---|
[623] | 1659 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem ARCHIVE |
---|
[622] | 1660 | #D-* Examples: |
---|
| 1661 | #D- |
---|
| 1662 | function IGCM_sys_GetDate_FichArchive { |
---|
[623] | 1663 | IGCM_debug_PushStack "IGCM_sys_FichArchive" $@ |
---|
| 1664 | if ( $DEBUG_sys ) ; then |
---|
| 1665 | echo "IGCM_sys_GetDate_FichArchive :" $@ |
---|
| 1666 | fi |
---|
| 1667 | typeset dateF |
---|
| 1668 | set +A dateF -- $( ls -l --full-time --time-style='+%Y%m%d%H%M%S' ${1} ) |
---|
| 1669 | eval ${2}=${dateF[5]} |
---|
| 1670 | |
---|
| 1671 | IGCM_debug_PopStack "IGCM_sys_FichArchive" |
---|
| 1672 | } |
---|
| 1673 | |
---|
| 1674 | #D-#================================================== |
---|
| 1675 | #D-function IGCM_sys_Dods_Rm |
---|
| 1676 | #D-* Purpose: DO NOTHING ! Put ${ARCHIVE} files on DODS internet protocole. |
---|
| 1677 | #D-* Examples: |
---|
| 1678 | #D- |
---|
| 1679 | function IGCM_sys_Dods_Rm { |
---|
| 1680 | if ( $DEBUG_sys ) ; then |
---|
| 1681 | echo "IGCM_sys_Dods_Rm :" $@ |
---|
| 1682 | fi |
---|
[715] | 1683 | typeset status |
---|
[623] | 1684 | if [ $DRYRUN = 0 ]; then |
---|
| 1685 | |
---|
| 1686 | # if [ ! -d /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} ] ; then |
---|
| 1687 | # echo "WARNING : IGCM_sys_Dods_Rm /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} DOES NOT EXIST ." |
---|
| 1688 | # echo "Nothing has been done." |
---|
| 1689 | # return |
---|
| 1690 | # fi |
---|
| 1691 | |
---|
[649] | 1692 | /ccc/cont003/home/dsm/p86ipsl/bin/dods_rm public/${LOGIN}/${R_DODS}/${1} # > out_dods_rm 2>&1 |
---|
[715] | 1693 | status=$? |
---|
[623] | 1694 | |
---|
[715] | 1695 | # if [ ${status} -gt 0 ] ; then |
---|
[623] | 1696 | # echo "IGCM_sys_Dods_Rm : error." |
---|
| 1697 | # cat out_dods_rm |
---|
| 1698 | # IGCM_debug_Exit "IGCM_sys_Dods_Rm" |
---|
| 1699 | # else |
---|
| 1700 | # rm out_dods_rm |
---|
| 1701 | # fi |
---|
| 1702 | |
---|
| 1703 | else |
---|
| 1704 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1705 | fi |
---|
[715] | 1706 | return $status |
---|
[623] | 1707 | } |
---|
| 1708 | |
---|
| 1709 | #D-#================================================== |
---|
| 1710 | #D-function IGCM_sys_Dods_Cp |
---|
| 1711 | #D-* Purpose: Copy $(ARCHIVE) files on DODS internet protocole. |
---|
| 1712 | #D-* Examples: |
---|
| 1713 | #D- |
---|
| 1714 | function IGCM_sys_Dods_Cp { |
---|
| 1715 | if ( $DEBUG_sys ) ; then |
---|
| 1716 | echo "IGCM_sys_Dods_Cp :" $@ |
---|
| 1717 | fi |
---|
[715] | 1718 | typeset status |
---|
[623] | 1719 | if [ $DRYRUN = 0 ]; then |
---|
| 1720 | |
---|
| 1721 | # if [ ! -d ${R_SAVE}/${1} ] ; then |
---|
| 1722 | # echo "WARNING : IGCM_sys_Dods_Cp ${R_SAVE}/${1} DOES NOT EXIST ." |
---|
| 1723 | # echo "Nothing has been done." |
---|
| 1724 | # return |
---|
| 1725 | # fi |
---|
| 1726 | |
---|
[649] | 1727 | /ccc/cont003/home/dsm/p86ipsl/bin/dods_cp ${1} public/${LOGIN}/${R_DODS} # > out_dods_cp 2>&1 |
---|
[715] | 1728 | status=$? |
---|
[623] | 1729 | |
---|
[715] | 1730 | # if [ ${status} -gt 0 ] ; then |
---|
[623] | 1731 | # echo "IGCM_sys_Dods_Cp : error." |
---|
| 1732 | # cat out_dods_cp |
---|
| 1733 | # IGCM_debug_Exit "IGCM_sys_Dods_Cp" |
---|
| 1734 | # else |
---|
| 1735 | # rm out_dods_cp |
---|
| 1736 | # fi |
---|
| 1737 | |
---|
| 1738 | else |
---|
| 1739 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1740 | fi |
---|
[715] | 1741 | return $status |
---|
[623] | 1742 | } |
---|
| 1743 | |
---|
| 1744 | #D-#================================================== |
---|
| 1745 | #D-function IGCM_sys_Put_Dods |
---|
| 1746 | #D-* Purpose: Put $(ARCHIVE) files on DODS internet protocole. |
---|
| 1747 | #D-* Examples: |
---|
| 1748 | #D- |
---|
| 1749 | function IGCM_sys_Put_Dods { |
---|
| 1750 | IGCM_debug_PushStack "IGCM_sys_Put_Dods" $@ |
---|
| 1751 | if ( $DEBUG_sys ) ; then |
---|
| 1752 | echo "IGCM_sys_Put_Dods :" $@ |
---|
| 1753 | fi |
---|
[711] | 1754 | #set -vx |
---|
[715] | 1755 | typeset status |
---|
[623] | 1756 | if [ $DRYRUN = 0 ]; then |
---|
| 1757 | if ( [ ! -d ${R_SAVE}/${1} ] && [ ! -d ${R_FIGR}/${1} ] ) ; then |
---|
| 1758 | echo "WARNING IGCM_sys_Put_Dods : None of the following directories exist. Exactly one should." |
---|
| 1759 | echo "WARNING IGCM_sys_Put_Dods : ${R_SAVE}/${1} DOES NOT EXIST." |
---|
| 1760 | echo "WARNING IGCM_sys_Put_Dods : ${R_FIGR}/${1} DOES NOT EXIST." |
---|
| 1761 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 1762 | return |
---|
[622] | 1763 | fi |
---|
[623] | 1764 | |
---|
| 1765 | if ( [ -d ${R_SAVE}/${1} ] && [ -d ${R_FIGR}/${1} ] ) ; then |
---|
| 1766 | echo "WARNING IGCM_sys_Put_Dods : Both of the following directories exist. Exactly one should." |
---|
| 1767 | echo "WARNING IGCM_sys_Put_Dods : ${R_SAVE}/${1} EXISTS." |
---|
| 1768 | echo "WARNING IGCM_sys_Put_Dods : ${R_FIGR}/${1} EXISTS." |
---|
| 1769 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 1770 | return |
---|
| 1771 | fi |
---|
| 1772 | # |
---|
| 1773 | if [ -d ${R_SAVE}/${1} ] ; then |
---|
| 1774 | cd ${R_SAVE} |
---|
| 1775 | elif [ -d ${R_FIGR}/${1} ] ; then |
---|
| 1776 | cd ${R_FIGR} |
---|
| 1777 | fi |
---|
| 1778 | |
---|
| 1779 | IGCM_sys_Dods_Rm ${1} |
---|
| 1780 | IGCM_sys_Dods_Cp ${1} |
---|
[715] | 1781 | status=0 |
---|
[623] | 1782 | |
---|
[715] | 1783 | if [ ${status} -gt 0 ] ; then |
---|
[623] | 1784 | echo "IGCM_sys_Put_Dods : error." |
---|
| 1785 | IGCM_debug_Exit "IGCM_sys_Put_Dods" |
---|
| 1786 | fi |
---|
| 1787 | else |
---|
| 1788 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1789 | fi |
---|
| 1790 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
[622] | 1791 | } |
---|
| 1792 | |
---|
| 1793 | ############################################################## |
---|
| 1794 | # REBUILD OPERATOR |
---|
| 1795 | |
---|
| 1796 | function IGCM_sys_rebuild { |
---|
[623] | 1797 | IGCM_debug_PushStack "IGCM_sys_rebuild" -- $@ |
---|
| 1798 | if ( $DEBUG_sys ) ; then |
---|
| 1799 | echo "IGCM_sys_rebuild :" $@ |
---|
| 1800 | fi |
---|
[716] | 1801 | |
---|
| 1802 | typeset NB_ESSAI DELAI status i |
---|
| 1803 | # number of tentative |
---|
| 1804 | NB_ESSAI=3 |
---|
| 1805 | # time delay between tentative |
---|
| 1806 | DELAI=2 |
---|
| 1807 | |
---|
| 1808 | i=0 |
---|
| 1809 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1810 | ~p86ipsl/CESIUM/bin/rebuild -f -o $@ > out_rsync 2>&1 |
---|
| 1811 | status=$? |
---|
| 1812 | if [ ${status} -gt 0 ] ; then |
---|
| 1813 | IGCM_debug_Print 2 "IGCM_sys_rebuild : error code ${status}" |
---|
| 1814 | cat out_rsync |
---|
| 1815 | \rm out_rsync |
---|
| 1816 | IGCM_debug_Print 2 "IGCM_sys_rebuild : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 1817 | else |
---|
| 1818 | \rm out_rsync |
---|
| 1819 | break |
---|
| 1820 | fi |
---|
| 1821 | (( i = i + 1 )) |
---|
| 1822 | done |
---|
| 1823 | |
---|
[623] | 1824 | if [ $? -gt 0 ] ; then |
---|
[716] | 1825 | echo "IGCM_sys_rebuild : rebuild error" |
---|
[623] | 1826 | IGCM_debug_Exit "rebuild" |
---|
| 1827 | fi |
---|
[622] | 1828 | |
---|
[623] | 1829 | IGCM_debug_PopStack "IGCM_sys_rebuild" |
---|
[622] | 1830 | } |
---|
| 1831 | |
---|
[697] | 1832 | function IGCM_sys_rebuild_station { |
---|
| 1833 | IGCM_debug_PushStack "IGCM_sys_rebuild_station" -- $@ |
---|
| 1834 | typeset i list_opt file_in file_out prefix_invert list_invert |
---|
| 1835 | if ( $DEBUG_sys ) ; then |
---|
| 1836 | echo "IGCM_sys_rebuild_station :" $@ |
---|
| 1837 | fi |
---|
| 1838 | list_opt=$@ |
---|
| 1839 | |
---|
| 1840 | # Invert Axis : t,x -> x,t |
---|
| 1841 | # t,pres,x -> x,t,pres |
---|
| 1842 | # So that we can concatenate along x |
---|
| 1843 | i=0 |
---|
| 1844 | for file_in in ${list_opt} ; do |
---|
| 1845 | (( i = i + 1)) |
---|
| 1846 | [ ${i} = 1 ] && file_out=${file_in} && continue |
---|
| 1847 | prefix_invert=$( basename ${file_in} .nc ) |
---|
| 1848 | IGCM_sys_ncpdq -a x,time_counter -a x,time_counter,presnivs ${file_in} ${prefix_invert}_xt.nc |
---|
| 1849 | list_invert[${#list_invert[*]}]=${prefix_invert}_xt.nc |
---|
| 1850 | done |
---|
| 1851 | |
---|
| 1852 | # Concatenate |
---|
| 1853 | IGCM_sys_ncrcat ${list_invert[*]} histstn_xt.nc |
---|
| 1854 | |
---|
| 1855 | # Re-ivert file |
---|
| 1856 | IGCM_sys_ncpdq -a time_counter,x -a time_counter,presnivs,x histstn_xt.nc ${file_out} |
---|
| 1857 | |
---|
| 1858 | # Station re-ordering is too expansive to be run within libICGM |
---|
| 1859 | # This is due to (ncpdq - nrcat - ncpdq) I/O sequence. |
---|
| 1860 | # This re-ordering must be done "in memory" by the cmorization process |
---|
| 1861 | # Anyway this is the best sequence using (ncpdq - nrcat - ncpdq) |
---|
| 1862 | # BEGIN reordering |
---|
| 1863 | |
---|
| 1864 | # Only LMDZ text output contains the exact ordering of the station. |
---|
| 1865 | # We isolate this in the code below: |
---|
| 1866 | # 0 38 -157.5000000000000 70.98591549295774 |
---|
| 1867 | # 0 54 27.49999999999999 67.18309859154928 |
---|
| 1868 | # 0 56 -62.50000000000001 82.39436619718309 |
---|
| 1869 | # 0 79 12.49999999999999 78.59154929577466 |
---|
| 1870 | # 0 116 -165.0000000000000 76.05633802816901 |
---|
| 1871 | # 0 117 130.0000000000000 70.98591549295774 |
---|
| 1872 | # 0 118 110.0000000000000 87.46478873239437 |
---|
| 1873 | # 1 40 4.999999999999995 51.97183098591550 |
---|
| 1874 | # typeset iStation iProc list_opt file_in file_out prefix_invert |
---|
| 1875 | # typeset -Z4 j4 |
---|
| 1876 | # typeset -Z3 j3 |
---|
| 1877 | |
---|
| 1878 | # unset list_opt |
---|
| 1879 | # set +A list_opt $@ |
---|
| 1880 | |
---|
| 1881 | # Filename after rebuild |
---|
| 1882 | # file_out=${list_opt[0]} |
---|
| 1883 | # Prefix of output files |
---|
| 1884 | # prefix_invert=$( basename ${file_out} .nc ) |
---|
| 1885 | # Number of procs |
---|
| 1886 | # num_proc=$( grep -i mpi_size ${PREFIX}_${Exe_Output} | wc -l ) |
---|
| 1887 | |
---|
| 1888 | # iProc=0 |
---|
| 1889 | # while [ ${iProc} -lt ${num_proc} ] ; do |
---|
| 1890 | # Array containing Station as a number |
---|
| 1891 | # unset proc_stn |
---|
| 1892 | # set +A proc_stn $( grep "iophy_mpi rank ip lon lat $iProc" ${PREFIX}_${Exe_Output} | sed -e "s/iophy_mpi rank ip lon lat //g" | awk ' {print $2}' ) |
---|
| 1893 | # Number of stations produced by processor proc |
---|
| 1894 | # stationLast=${#proc_stn[*]} |
---|
| 1895 | # Proc number on 4 digits |
---|
| 1896 | # j4=${iProc} |
---|
| 1897 | # Init |
---|
| 1898 | # iStation=0 |
---|
| 1899 | # while [ ${iStation} -lt ${stationLast} ] ; do |
---|
| 1900 | # Station number on 3 digits |
---|
| 1901 | # j3=${proc_stn[${iStation}]} |
---|
| 1902 | # Extract station |
---|
| 1903 | # Invert Axis : t,x -> x,t |
---|
| 1904 | # t,pres,x -> x,t,pres |
---|
| 1905 | # So that we can concatenate along x |
---|
| 1906 | # IGCM_sys_ncpdq -a x,time_counter -a x,time_counter,presnivs -d x,$iStation,$iStation ${prefix_invert}_${j4}.nc ${prefix_invert}_stn_${j3}.nc |
---|
| 1907 | # (( iStation = iStation + 1 )) |
---|
| 1908 | # done |
---|
| 1909 | # (( iProc = iProc + 1 )) |
---|
| 1910 | # done |
---|
| 1911 | |
---|
| 1912 | # Concatenate all station along x |
---|
| 1913 | # IGCM_sys_ncrcat ${prefix_invert}_stn_???.nc ${prefix_invert}_xt.nc |
---|
| 1914 | |
---|
| 1915 | # Re-invert file |
---|
| 1916 | # IGCM_sys_ncpdq -a time_counter,x -a time_counter,presnivs,x ${prefix_invert}_xt.nc ${file_out} |
---|
| 1917 | |
---|
| 1918 | # END reordering |
---|
| 1919 | |
---|
| 1920 | IGCM_debug_PopStack "IGCM_sys_rebuild_station" |
---|
| 1921 | } |
---|
| 1922 | |
---|
[622] | 1923 | ############################################################ |
---|
| 1924 | # Activate Running Environnment Variables |
---|
| 1925 | |
---|
| 1926 | function IGCM_sys_activ_variables { |
---|
[623] | 1927 | IGCM_debug_PushStack "IGCM_sys_activ_variables" |
---|
| 1928 | if ( $DEBUG_sys ) ; then |
---|
| 1929 | echo "IGCM_sys_activ_variables" |
---|
| 1930 | fi |
---|
[622] | 1931 | |
---|
[623] | 1932 | ulimit -s unlimited |
---|
[622] | 1933 | |
---|
[623] | 1934 | IGCM_debug_PopStack "IGCM_sys_activ_variables" |
---|
[622] | 1935 | } |
---|
| 1936 | |
---|
| 1937 | ############################################################ |
---|
| 1938 | # Desactivate Running Environnment Variables |
---|
| 1939 | |
---|
| 1940 | function IGCM_sys_desactiv_variables { |
---|
[623] | 1941 | IGCM_debug_PushStack "IGCM_sys_desactiv_variables" |
---|
| 1942 | if ( $DEBUG_sys ) ; then |
---|
| 1943 | echo "IGCM_sys_desactiv_variables" |
---|
| 1944 | fi |
---|
| 1945 | IGCM_debug_PopStack "IGCM_sys_desactiv_variables" |
---|
[622] | 1946 | } |
---|
| 1947 | |
---|
[623] | 1948 | ############################################################ |
---|
| 1949 | # Build MPI/OMP scripts run file (dummy function) |
---|
[622] | 1950 | |
---|
| 1951 | function IGCM_sys_build_run_file { |
---|
| 1952 | |
---|
[623] | 1953 | IGCM_debug_Print 3 " dummy function : IGCM_sys_build_run_file " |
---|
[622] | 1954 | |
---|
| 1955 | } |
---|
| 1956 | |
---|
| 1957 | ############################################################ |
---|
| 1958 | # Build MPI/OMP scripts |
---|
[623] | 1959 | function IGCM_sys_build_execution_scripts |
---|
[622] | 1960 | { |
---|
[623] | 1961 | IGCM_debug_PushStack "IGCM_sys_build_execution_scripts" $@ |
---|
| 1962 | if ( $DEBUG_sys ) ; then |
---|
| 1963 | echo "IGCM_sys_build_execution_scripts " $@ |
---|
| 1964 | fi |
---|
[622] | 1965 | |
---|
| 1966 | # Verification with MSUB parameter |
---|
[623] | 1967 | EXECUTION=${HOST_MPIRUN_COMMAND} |
---|
[622] | 1968 | |
---|
[623] | 1969 | if ( ${OK_PARA_MPMD} ) ; then |
---|
[622] | 1970 | |
---|
[623] | 1971 | if [ -f run_file ] ; then |
---|
| 1972 | IGCM_sys_Rm -f run_file |
---|
| 1973 | fi |
---|
| 1974 | touch run_file |
---|
[622] | 1975 | |
---|
| 1976 | # run_file construction |
---|
| 1977 | |
---|
| 1978 | # Then first loop on the components for the coupler ie oasis |
---|
| 1979 | |
---|
| 1980 | ### the coupler ie oasis must be the first one |
---|
| 1981 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 1982 | |
---|
[623] | 1983 | eval ExeNameIn=\${config_Executable_${comp}[0]} |
---|
| 1984 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
[622] | 1985 | |
---|
| 1986 | # for CPL component only |
---|
[623] | 1987 | if [ "X${comp}" = "XCPL" ] ; then |
---|
[622] | 1988 | |
---|
[623] | 1989 | eval comp_proc_mpi_loc=\${${comp}_PROC_MPI} |
---|
| 1990 | eval comp_proc_omp_loc=\${${comp}_PROC_OMP} |
---|
| 1991 | echo "${comp_proc_mpi_loc} ./${ExeNameOut}" >> run_file |
---|
| 1992 | fi |
---|
[622] | 1993 | done |
---|
| 1994 | |
---|
| 1995 | # Then second loop on the components |
---|
| 1996 | |
---|
| 1997 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 1998 | |
---|
[623] | 1999 | eval ExeNameIn=\${config_Executable_${comp}[0]} |
---|
| 2000 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
[622] | 2001 | |
---|
| 2002 | # Only if we really have an executable for the component and not the coupler ie oasis: |
---|
[623] | 2003 | if ( [ "X${ExeNameOut}" != X\"\" ] && [ "X${comp}" != "XCPL" ] ) ; then |
---|
[622] | 2004 | |
---|
[623] | 2005 | eval comp_proc_mpi_loc=\${${comp}_PROC_MPI} |
---|
| 2006 | eval comp_proc_omp_loc=\${${comp}_PROC_OMP} |
---|
| 2007 | echo "${comp_proc_mpi_loc} ./${ExeNameOut}" >> run_file |
---|
| 2008 | fi |
---|
[622] | 2009 | done |
---|
| 2010 | |
---|
| 2011 | EXECUTION="${HOST_MPIRUN_COMMAND} -f ./run_file" |
---|
| 2012 | |
---|
| 2013 | IGCM_sys_Chmod u+x run_file |
---|
| 2014 | if ( $DEBUG_sys ) ; then |
---|
| 2015 | echo "run_file contains : " |
---|
| 2016 | cat run_file |
---|
| 2017 | fi |
---|
| 2018 | |
---|
[623] | 2019 | else # Only one executable. launch it. |
---|
[622] | 2020 | |
---|
[623] | 2021 | # |
---|
[622] | 2022 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 2023 | |
---|
[685] | 2024 | # Only if we really have an executable for the component : |
---|
[623] | 2025 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
[685] | 2026 | if ( [ "X${ExeNameOut}" != X\"\" ] && [ "X${ExeNameOut}" != "Xinca.dat" ] ) ; then |
---|
[622] | 2027 | |
---|
[685] | 2028 | echo "#!/bin/ksh" > script_${ExeNameOut}.ksh |
---|
| 2029 | echo "" >> script_${ExeNameOut}.ksh |
---|
| 2030 | IGCM_sys_Chmod u+x script_${ExeNameOut}.ksh |
---|
| 2031 | |
---|
| 2032 | if ( ${OK_PARA_OMP} ) ; then |
---|
| 2033 | eval comp_proc_omp_loc=\${${comp}_PROC_OMP} |
---|
| 2034 | echo "" >> script_${ExeNameOut}.ksh |
---|
| 2035 | echo "export KMP_STACKSIZE=3g" >> script_${ExeNameOut}.ksh |
---|
| 2036 | echo "export KMP_LIBRARY=turnaround" >> script_${ExeNameOut}.ksh |
---|
| 2037 | echo "export MKL_SERIAL=YES" >> script_${ExeNameOut}.ksh |
---|
| 2038 | echo "OMP_NUM_THREADS=${comp_proc_omp_loc}" >> script_${ExeNameOut}.ksh |
---|
| 2039 | fi |
---|
| 2040 | |
---|
| 2041 | if ( ${OK_PARA_MPI} ) ; then |
---|
[623] | 2042 | eval comp_proc_mpi_loc=\${${comp}_PROC_MPI} |
---|
[685] | 2043 | # Default : ccc_mprun used if nb_proc gt 1 |
---|
| 2044 | # to have out/err per process on different files |
---|
| 2045 | # echo "./${ExeNameOut} > out_${ExeNameOut}.out.\${SLURM_PROCID} 2>out_${ExeNameOut}.err.\${SLURM_PROCID}" >> script_${ExeNameOut}.ksh |
---|
| 2046 | echo "./${ExeNameOut}" >> script_${ExeNameOut}.ksh |
---|
| 2047 | EXECUTION="${HOST_MPIRUN_COMMAND} -n ${comp_proc_mpi_loc} ./script_${ExeNameOut}.ksh" |
---|
[623] | 2048 | else |
---|
[685] | 2049 | # Default : ccc_mprun is NOT used if nb_proc eq 1 |
---|
| 2050 | # to have out/err per process on different files |
---|
| 2051 | # echo "./${ExeNameOut} > out_${ExeNameOut}.out 2>out_${ExeNameOut}.err" >> script_${ExeNameOut}.ksh |
---|
| 2052 | echo "./${ExeNameOut}" >> script_${ExeNameOut}.ksh |
---|
| 2053 | EXECUTION="/usr/bin/time ./script_${ExeNameOut}.ksh" |
---|
[622] | 2054 | fi |
---|
[685] | 2055 | |
---|
| 2056 | IGCM_debug_Print 1 "sys Curie : script_${ExeNameOut}.ksh contains" |
---|
| 2057 | cat script_${ExeNameOut}.ksh |
---|
| 2058 | |
---|
[623] | 2059 | fi |
---|
[622] | 2060 | |
---|
| 2061 | done |
---|
| 2062 | |
---|
[623] | 2063 | fi |
---|
[622] | 2064 | |
---|
[623] | 2065 | IGCM_debug_Print 1 "sys Curie : execution command is " |
---|
| 2066 | IGCM_debug_Print 1 "$EXECUTION" |
---|
[622] | 2067 | |
---|
[623] | 2068 | IGCM_debug_PopStack "IGCM_sys_build_execution_scripts" |
---|
[622] | 2069 | } |
---|
| 2070 | |
---|
[714] | 2071 | ############################################################ |
---|
| 2072 | # Check of space available on temporary filesytems |
---|
| 2073 | function IGCM_sys_check_quota { |
---|
| 2074 | IGCM_debug_PushStack "IGCM_sys_check_quota" |
---|
| 2075 | if ( $DEBUG_sys ) ; then |
---|
| 2076 | echo "IGCM_sys_check_quota" |
---|
| 2077 | fi |
---|
| 2078 | IGCM_debug_PopStack "IGCM_sys_check_quota" |
---|
| 2079 | } |
---|
| 2080 | |
---|
[622] | 2081 | ############################################################## |
---|
| 2082 | # NCO OPERATOR |
---|
| 2083 | |
---|
[623] | 2084 | function IGCM_sys_ncap2 { |
---|
| 2085 | IGCM_debug_PushStack "IGCM_sys_ncap2" -- $@ |
---|
| 2086 | if ( $DEBUG_sys ) ; then |
---|
| 2087 | echo "IGCM_sys_ncap2 :" $@ |
---|
| 2088 | fi |
---|
[713] | 2089 | |
---|
| 2090 | typeset NB_ESSAI DELAI status i |
---|
| 2091 | # number of tentative |
---|
| 2092 | NB_ESSAI=3 |
---|
| 2093 | # time delay between tentative |
---|
| 2094 | DELAI=2 |
---|
| 2095 | |
---|
| 2096 | i=0 |
---|
| 2097 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2098 | ncap2 "$@" > out_rsync 2>&1 |
---|
| 2099 | status=$? |
---|
| 2100 | if [ ${status} -gt 0 ] ; then |
---|
| 2101 | IGCM_debug_Print 2 "IGCM_sys_ncap2 : error code ${status}" |
---|
| 2102 | cat out_rsync |
---|
| 2103 | \rm out_rsync |
---|
| 2104 | IGCM_debug_Print 2 "IGCM_sys_ncap2 : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 2105 | else |
---|
| 2106 | \rm out_rsync |
---|
| 2107 | break |
---|
| 2108 | fi |
---|
| 2109 | (( i = i + 1 )) |
---|
| 2110 | done |
---|
| 2111 | |
---|
| 2112 | if [ ${status} -gt 0 ] ; then |
---|
| 2113 | echo "IGCM_sys_ncap2 : ncap2 error" |
---|
| 2114 | IGCM_debug_Exit "ncap2" |
---|
[623] | 2115 | fi |
---|
| 2116 | |
---|
| 2117 | IGCM_debug_PopStack "IGCM_sys_ncap2" |
---|
| 2118 | } |
---|
| 2119 | |
---|
[622] | 2120 | function IGCM_sys_ncatted { |
---|
[623] | 2121 | IGCM_debug_PushStack "IGCM_sys_ncatted" -- $@ |
---|
| 2122 | if ( $DEBUG_sys ) ; then |
---|
| 2123 | echo "IGCM_sys_ncatted :" $@ |
---|
| 2124 | fi |
---|
[713] | 2125 | |
---|
| 2126 | typeset NB_ESSAI DELAI status i |
---|
| 2127 | # number of tentative |
---|
| 2128 | NB_ESSAI=3 |
---|
| 2129 | # time delay between tentative |
---|
| 2130 | DELAI=2 |
---|
| 2131 | |
---|
| 2132 | i=0 |
---|
| 2133 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2134 | ncatted "$@" > out_rsync 2>&1 |
---|
| 2135 | status=$? |
---|
| 2136 | if [ ${status} -gt 0 ] ; then |
---|
| 2137 | IGCM_debug_Print 2 "IGCM_sys_ncatted : error code ${status}" |
---|
| 2138 | cat out_rsync |
---|
| 2139 | \rm out_rsync |
---|
| 2140 | IGCM_debug_Print 2 "IGCM_sys_ncatted : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 2141 | else |
---|
| 2142 | \rm out_rsync |
---|
| 2143 | break |
---|
| 2144 | fi |
---|
| 2145 | (( i = i + 1 )) |
---|
| 2146 | done |
---|
| 2147 | |
---|
| 2148 | if [ ${status} -gt 0 ] ; then |
---|
| 2149 | echo "IGCM_sys_ncatted : ncatted error" |
---|
| 2150 | IGCM_debug_Exit "ncatted" |
---|
[623] | 2151 | fi |
---|
[622] | 2152 | |
---|
[623] | 2153 | IGCM_debug_PopStack "IGCM_sys_ncatted" |
---|
[622] | 2154 | } |
---|
| 2155 | |
---|
| 2156 | function IGCM_sys_ncbo { |
---|
[623] | 2157 | IGCM_debug_PushStack "IGCM_sys_ncbo" -- $@ |
---|
| 2158 | if ( $DEBUG_sys ) ; then |
---|
| 2159 | echo "IGCM_sys_ncbo :" $@ |
---|
| 2160 | fi |
---|
[713] | 2161 | |
---|
| 2162 | typeset NB_ESSAI DELAI status i |
---|
| 2163 | # number of tentative |
---|
| 2164 | NB_ESSAI=3 |
---|
| 2165 | # time delay between tentative |
---|
| 2166 | DELAI=2 |
---|
| 2167 | |
---|
| 2168 | i=0 |
---|
| 2169 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2170 | ncbo $@ > out_rsync 2>&1 |
---|
| 2171 | status=$? |
---|
| 2172 | if [ ${status} -gt 0 ] ; then |
---|
| 2173 | IGCM_debug_Print 2 "IGCM_sys_ncbo : error code ${status}" |
---|
| 2174 | cat out_rsync |
---|
| 2175 | \rm out_rsync |
---|
| 2176 | IGCM_debug_Print 2 "IGCM_sys_ncbo : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 2177 | else |
---|
| 2178 | \rm out_rsync |
---|
| 2179 | break |
---|
| 2180 | fi |
---|
| 2181 | (( i = i + 1 )) |
---|
| 2182 | done |
---|
| 2183 | |
---|
| 2184 | if [ ${status} -gt 0 ] ; then |
---|
| 2185 | echo "IGCM_sys_ncbo : ncbo error" |
---|
| 2186 | IGCM_debug_Exit "ncbo" |
---|
[623] | 2187 | fi |
---|
[622] | 2188 | |
---|
[623] | 2189 | IGCM_debug_PopStack "IGCM_sys_ncbo" |
---|
[622] | 2190 | } |
---|
| 2191 | |
---|
| 2192 | function IGCM_sys_ncdiff { |
---|
[623] | 2193 | IGCM_debug_PushStack "IGCM_sys_ncdiff" -- $@ |
---|
| 2194 | if ( $DEBUG_sys ) ; then |
---|
| 2195 | echo "IGCM_sys_ncdiff :" $@ |
---|
| 2196 | fi |
---|
[713] | 2197 | |
---|
| 2198 | typeset NB_ESSAI DELAI status i |
---|
| 2199 | # number of tentative |
---|
| 2200 | NB_ESSAI=3 |
---|
| 2201 | # time delay between tentative |
---|
| 2202 | DELAI=2 |
---|
| 2203 | |
---|
| 2204 | i=0 |
---|
| 2205 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2206 | ncdiff $@ > out_rsync 2>&1 |
---|
| 2207 | status=$? |
---|
| 2208 | if [ ${status} -gt 0 ] ; then |
---|
| 2209 | IGCM_debug_Print 2 "IGCM_sys_ncdiff : error code ${status}" |
---|
| 2210 | cat out_rsync |
---|
| 2211 | \rm out_rsync |
---|
| 2212 | IGCM_debug_Print 2 "IGCM_sys_ncdiff : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 2213 | else |
---|
| 2214 | \rm out_rsync |
---|
| 2215 | break |
---|
| 2216 | fi |
---|
| 2217 | (( i = i + 1 )) |
---|
| 2218 | done |
---|
| 2219 | |
---|
| 2220 | if [ ${status} -gt 0 ] ; then |
---|
| 2221 | echo "IGCM_sys_ncdiff : ncdiff error" |
---|
| 2222 | IGCM_debug_Exit "ncdiff" |
---|
[623] | 2223 | fi |
---|
[622] | 2224 | |
---|
[623] | 2225 | IGCM_debug_PopStack "IGCM_sys_ncdiff" |
---|
[622] | 2226 | } |
---|
| 2227 | |
---|
| 2228 | function IGCM_sys_ncea { |
---|
[623] | 2229 | IGCM_debug_PushStack "IGCM_sys_ncea" -- $@ |
---|
| 2230 | if ( $DEBUG_sys ) ; then |
---|
| 2231 | echo "IGCM_sys_ncea :" $@ |
---|
| 2232 | fi |
---|
[713] | 2233 | |
---|
| 2234 | typeset NB_ESSAI DELAI status i |
---|
| 2235 | # number of tentative |
---|
| 2236 | NB_ESSAI=3 |
---|
| 2237 | # time delay between tentative |
---|
| 2238 | DELAI=2 |
---|
| 2239 | |
---|
| 2240 | i=0 |
---|
| 2241 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2242 | ncea $@ > out_rsync 2>&1 |
---|
| 2243 | status=$? |
---|
| 2244 | if [ ${status} -gt 0 ] ; then |
---|
| 2245 | IGCM_debug_Print 2 "IGCM_sys_ncea : error code ${status}" |
---|
| 2246 | cat out_rsync |
---|
| 2247 | \rm out_rsync |
---|
| 2248 | IGCM_debug_Print 2 "IGCM_sys_ncea : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 2249 | else |
---|
| 2250 | \rm out_rsync |
---|
| 2251 | break |
---|
| 2252 | fi |
---|
| 2253 | (( i = i + 1 )) |
---|
| 2254 | done |
---|
| 2255 | |
---|
| 2256 | if [ ${status} -gt 0 ] ; then |
---|
| 2257 | echo "IGCM_sys_ncea : ncea error" |
---|
| 2258 | IGCM_debug_Exit "ncea" |
---|
[623] | 2259 | fi |
---|
[622] | 2260 | |
---|
[623] | 2261 | IGCM_debug_PopStack "IGCM_sys_ncea" |
---|
[622] | 2262 | } |
---|
| 2263 | |
---|
| 2264 | function IGCM_sys_ncecat { |
---|
[623] | 2265 | IGCM_debug_PushStack "IGCM_sys_ncecat" -- $@ |
---|
| 2266 | if ( $DEBUG_sys ) ; then |
---|
| 2267 | echo "IGCM_sys_ncecat :" $@ |
---|
| 2268 | fi |
---|
[713] | 2269 | |
---|
| 2270 | typeset NB_ESSAI DELAI status i |
---|
| 2271 | # number of tentative |
---|
| 2272 | NB_ESSAI=3 |
---|
| 2273 | # time delay between tentative |
---|
| 2274 | DELAI=2 |
---|
| 2275 | |
---|
| 2276 | i=0 |
---|
| 2277 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2278 | ncecat $@ > out_rsync 2>&1 |
---|
| 2279 | status=$? |
---|
| 2280 | if [ ${status} -gt 0 ] ; then |
---|
| 2281 | IGCM_debug_Print 2 "IGCM_sys_ncecat : error code ${status}" |
---|
| 2282 | cat out_rsync |
---|
| 2283 | \rm out_rsync |
---|
| 2284 | IGCM_debug_Print 2 "IGCM_sys_ncecat : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 2285 | else |
---|
| 2286 | \rm out_rsync |
---|
| 2287 | break |
---|
| 2288 | fi |
---|
| 2289 | (( i = i + 1 )) |
---|
| 2290 | done |
---|
| 2291 | |
---|
| 2292 | if [ ${status} -gt 0 ] ; then |
---|
| 2293 | echo "IGCM_sys_ncecat : ncecat error" |
---|
| 2294 | IGCM_debug_Exit "ncecat" |
---|
[623] | 2295 | fi |
---|
[622] | 2296 | |
---|
[623] | 2297 | IGCM_debug_PopStack "IGCM_sys_ncecat" |
---|
[622] | 2298 | } |
---|
| 2299 | |
---|
| 2300 | function IGCM_sys_ncflint { |
---|
[623] | 2301 | IGCM_debug_PushStack "IGCM_sys_ncflint" -- $@ |
---|
| 2302 | if ( $DEBUG_sys ) ; then |
---|
| 2303 | echo "IGCM_sys_ncflint :" $@ |
---|
| 2304 | fi |
---|
[713] | 2305 | |
---|
| 2306 | typeset NB_ESSAI DELAI status i |
---|
| 2307 | # number of tentative |
---|
| 2308 | NB_ESSAI=3 |
---|
| 2309 | # time delay between tentative |
---|
| 2310 | DELAI=2 |
---|
| 2311 | |
---|
| 2312 | i=0 |
---|
| 2313 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2314 | ncflint $@ > out_rsync 2>&1 |
---|
| 2315 | status=$? |
---|
| 2316 | if [ ${status} -gt 0 ] ; then |
---|
| 2317 | IGCM_debug_Print 2 "IGCM_sys_ncflint : error code ${status}" |
---|
| 2318 | cat out_rsync |
---|
| 2319 | \rm out_rsync |
---|
| 2320 | IGCM_debug_Print 2 "IGCM_sys_ncflint : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 2321 | else |
---|
| 2322 | \rm out_rsync |
---|
| 2323 | break |
---|
| 2324 | fi |
---|
| 2325 | (( i = i + 1 )) |
---|
| 2326 | done |
---|
| 2327 | |
---|
| 2328 | if [ ${status} -gt 0 ] ; then |
---|
| 2329 | echo "IGCM_sys_ncflint : ncflint error" |
---|
| 2330 | IGCM_debug_Exit "ncflint" |
---|
[623] | 2331 | fi |
---|
[622] | 2332 | |
---|
[623] | 2333 | IGCM_debug_PopStack "IGCM_sys_ncflint" |
---|
[622] | 2334 | } |
---|
| 2335 | |
---|
| 2336 | function IGCM_sys_ncks { |
---|
[623] | 2337 | IGCM_debug_PushStack "IGCM_sys_ncks" -- $@ |
---|
| 2338 | if ( $DEBUG_sys ) ; then |
---|
| 2339 | echo "IGCM_sys_ncks :" $@ |
---|
| 2340 | fi |
---|
[713] | 2341 | |
---|
| 2342 | typeset NB_ESSAI DELAI status i |
---|
| 2343 | # number of tentative |
---|
| 2344 | NB_ESSAI=3 |
---|
| 2345 | # time delay between tentative |
---|
| 2346 | DELAI=2 |
---|
| 2347 | |
---|
| 2348 | i=0 |
---|
| 2349 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2350 | ncks $@ > out_rsync 2>&1 |
---|
| 2351 | status=$? |
---|
| 2352 | if [ ${status} -gt 0 ] ; then |
---|
| 2353 | IGCM_debug_Print 2 "IGCM_sys_ncks : error code ${status}" |
---|
| 2354 | cat out_rsync |
---|
| 2355 | \rm out_rsync |
---|
| 2356 | IGCM_debug_Print 2 "IGCM_sys_ncks : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 2357 | else |
---|
| 2358 | \rm out_rsync |
---|
| 2359 | break |
---|
| 2360 | fi |
---|
| 2361 | (( i = i + 1 )) |
---|
| 2362 | done |
---|
| 2363 | |
---|
| 2364 | if [ ${status} -gt 0 ] ; then |
---|
| 2365 | echo "IGCM_sys_ncks : ncks error" |
---|
| 2366 | IGCM_debug_Exit "ncks" |
---|
[623] | 2367 | fi |
---|
[622] | 2368 | |
---|
[623] | 2369 | IGCM_debug_PopStack "IGCM_sys_ncks" |
---|
[622] | 2370 | } |
---|
| 2371 | |
---|
| 2372 | function IGCM_sys_ncpdq { |
---|
[623] | 2373 | IGCM_debug_PushStack "IGCM_sys_ncpdq" -- $@ |
---|
| 2374 | if ( $DEBUG_sys ) ; then |
---|
| 2375 | echo "IGCM_sys_ncpdq :" $@ |
---|
| 2376 | fi |
---|
[713] | 2377 | |
---|
| 2378 | typeset NB_ESSAI DELAI status i |
---|
| 2379 | # number of tentative |
---|
| 2380 | NB_ESSAI=3 |
---|
| 2381 | # time delay between tentative |
---|
| 2382 | DELAI=2 |
---|
| 2383 | |
---|
| 2384 | i=0 |
---|
| 2385 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2386 | ncpdq $@ > out_rsync 2>&1 |
---|
| 2387 | status=$? |
---|
| 2388 | if [ ${status} -gt 0 ] ; then |
---|
| 2389 | IGCM_debug_Print 2 "IGCM_sys_ncpdq : error code ${status}" |
---|
| 2390 | cat out_rsync |
---|
| 2391 | \rm out_rsync |
---|
| 2392 | IGCM_debug_Print 2 "IGCM_sys_ncpdq : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 2393 | else |
---|
| 2394 | \rm out_rsync |
---|
| 2395 | break |
---|
| 2396 | fi |
---|
| 2397 | (( i = i + 1 )) |
---|
| 2398 | done |
---|
| 2399 | |
---|
| 2400 | if [ ${status} -gt 0 ] ; then |
---|
| 2401 | echo "IGCM_sys_ncpdq : ncpdq error" |
---|
| 2402 | IGCM_debug_Exit "ncpdq" |
---|
[623] | 2403 | fi |
---|
[622] | 2404 | |
---|
[623] | 2405 | IGCM_debug_PopStack "IGCM_sys_ncpdq" |
---|
[622] | 2406 | } |
---|
| 2407 | |
---|
| 2408 | function IGCM_sys_ncra { |
---|
[623] | 2409 | IGCM_debug_PushStack "IGCM_sys_ncra" -- $@ |
---|
| 2410 | if ( $DEBUG_sys ) ; then |
---|
| 2411 | echo "IGCM_sys_ncra :" $@ |
---|
| 2412 | fi |
---|
[713] | 2413 | |
---|
| 2414 | typeset NB_ESSAI DELAI status i |
---|
| 2415 | # number of tentative |
---|
| 2416 | NB_ESSAI=3 |
---|
| 2417 | # time delay between tentative |
---|
| 2418 | DELAI=2 |
---|
| 2419 | |
---|
| 2420 | i=0 |
---|
| 2421 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2422 | ncra $@ > out_rsync 2>&1 |
---|
| 2423 | status=$? |
---|
| 2424 | if [ ${status} -gt 0 ] ; then |
---|
| 2425 | IGCM_debug_Print 2 "IGCM_sys_ncra : error code ${status}" |
---|
| 2426 | cat out_rsync |
---|
| 2427 | \rm out_rsync |
---|
| 2428 | IGCM_debug_Print 2 "IGCM_sys_ncra : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 2429 | else |
---|
| 2430 | \rm out_rsync |
---|
| 2431 | break |
---|
| 2432 | fi |
---|
| 2433 | (( i = i + 1 )) |
---|
| 2434 | done |
---|
| 2435 | |
---|
| 2436 | if [ ${status} -gt 0 ] ; then |
---|
| 2437 | echo "IGCM_sys_ncra : ncra error" |
---|
| 2438 | IGCM_debug_Exit "ncra" |
---|
[623] | 2439 | fi |
---|
[622] | 2440 | |
---|
[623] | 2441 | IGCM_debug_PopStack "IGCM_sys_ncra" |
---|
[622] | 2442 | } |
---|
| 2443 | |
---|
| 2444 | function IGCM_sys_ncrcat { |
---|
[623] | 2445 | IGCM_debug_PushStack "IGCM_sys_ncrcat" -- $@ |
---|
| 2446 | if ( $DEBUG_sys ) ; then |
---|
| 2447 | echo "IGCM_sys_ncrcat :" $@ |
---|
| 2448 | fi |
---|
[713] | 2449 | |
---|
| 2450 | typeset NB_ESSAI DELAI status i |
---|
| 2451 | # number of tentative |
---|
| 2452 | NB_ESSAI=3 |
---|
| 2453 | # time delay between tentative |
---|
| 2454 | DELAI=2 |
---|
| 2455 | |
---|
| 2456 | i=0 |
---|
| 2457 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2458 | ncrcat $@ > out_rsync 2>&1 |
---|
| 2459 | status=$? |
---|
| 2460 | if [ ${status} -gt 0 ] ; then |
---|
| 2461 | IGCM_debug_Print 2 "IGCM_sys_ncrcat : error code ${status}" |
---|
| 2462 | cat out_rsync |
---|
| 2463 | \rm out_rsync |
---|
| 2464 | IGCM_debug_Print 2 "IGCM_sys_ncrcat : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[721] | 2465 | elif [ ! "X$( grep "WARNING Intra-file non-monotonicity" out_rsync )" = "X" ] ; then |
---|
| 2466 | IGCM_debug_Print 2 "IGCM_sys_ncrcat : WARNING Intra-file non-monotonicity" |
---|
| 2467 | cat out_rsync |
---|
| 2468 | # Hacky output parsing... |
---|
| 2469 | toDelete=$( awk -F "output file " {'print $2'} out_rsync | awk -F " record" {'print $1'} ) |
---|
| 2470 | IGCM_debug_Print 2 "IGCM_sys_ncrcat : Delete ${toDelete}" |
---|
| 2471 | \rm ${toDelete} |
---|
| 2472 | \rm out_rsync |
---|
| 2473 | IGCM_debug_Print 2 "IGCM_sys_ncrcat : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
[713] | 2474 | else |
---|
| 2475 | \rm out_rsync |
---|
| 2476 | break |
---|
| 2477 | fi |
---|
| 2478 | (( i = i + 1 )) |
---|
| 2479 | done |
---|
| 2480 | |
---|
| 2481 | if [ ${status} -gt 0 ] ; then |
---|
| 2482 | echo "IGCM_sys_ncrcat : ncrcat error" |
---|
| 2483 | #IGCM_debug_Exit "ncrcat" |
---|
[623] | 2484 | fi |
---|
[622] | 2485 | |
---|
[623] | 2486 | IGCM_debug_PopStack "IGCM_sys_ncrcat" |
---|
[622] | 2487 | } |
---|
| 2488 | |
---|
| 2489 | function IGCM_sys_ncrename { |
---|
[623] | 2490 | IGCM_debug_PushStack "IGCM_sys_ncrename" -- $@ |
---|
| 2491 | if ( $DEBUG_sys ) ; then |
---|
| 2492 | echo "IGCM_sys_ncrename :" $@ |
---|
| 2493 | fi |
---|
[713] | 2494 | |
---|
| 2495 | typeset NB_ESSAI DELAI status i |
---|
| 2496 | # number of tentative |
---|
| 2497 | NB_ESSAI=3 |
---|
| 2498 | # time delay between tentative |
---|
| 2499 | DELAI=2 |
---|
| 2500 | |
---|
| 2501 | i=0 |
---|
| 2502 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2503 | ncrename $@ > out_rsync 2>&1 |
---|
| 2504 | status=$? |
---|
| 2505 | if [ ${status} -gt 0 ] ; then |
---|
| 2506 | IGCM_debug_Print 2 "IGCM_sys_ncrename : error code ${status}" |
---|
| 2507 | cat out_rsync |
---|
| 2508 | \rm out_rsync |
---|
| 2509 | IGCM_debug_Print 2 "IGCM_sys_ncrename : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 2510 | else |
---|
| 2511 | \rm out_rsync |
---|
| 2512 | break |
---|
| 2513 | fi |
---|
| 2514 | (( i = i + 1 )) |
---|
| 2515 | done |
---|
| 2516 | |
---|
| 2517 | if [ ${status} -gt 0 ] ; then |
---|
| 2518 | echo "IGCM_sys_ncrename : ncrename error" |
---|
| 2519 | IGCM_debug_Exit "ncrename" |
---|
[623] | 2520 | fi |
---|
[622] | 2521 | |
---|
[623] | 2522 | IGCM_debug_PopStack "IGCM_sys_ncrename" |
---|
[622] | 2523 | } |
---|
| 2524 | |
---|
| 2525 | function IGCM_sys_ncwa { |
---|
[623] | 2526 | IGCM_debug_PushStack "IGCM_sys_ncwa" -- $@ |
---|
| 2527 | if ( $DEBUG_sys ) ; then |
---|
| 2528 | echo "IGCM_sys_ncwa :" $@ |
---|
| 2529 | fi |
---|
[713] | 2530 | |
---|
| 2531 | typeset NB_ESSAI DELAI status i |
---|
| 2532 | # number of tentative |
---|
| 2533 | NB_ESSAI=3 |
---|
| 2534 | # time delay between tentative |
---|
| 2535 | DELAI=2 |
---|
| 2536 | |
---|
| 2537 | i=0 |
---|
| 2538 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 2539 | ncwa $@ > out_rsync 2>&1 |
---|
| 2540 | status=$? |
---|
| 2541 | if [ ${status} -gt 0 ] ; then |
---|
| 2542 | IGCM_debug_Print 2 "IGCM_sys_ncwa : error code ${status}" |
---|
| 2543 | cat out_rsync |
---|
| 2544 | \rm out_rsync |
---|
| 2545 | IGCM_debug_Print 2 "IGCM_sys_ncwa : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 2546 | else |
---|
| 2547 | \rm out_rsync |
---|
| 2548 | break |
---|
| 2549 | fi |
---|
| 2550 | (( i = i + 1 )) |
---|
| 2551 | done |
---|
| 2552 | |
---|
| 2553 | if [ ${status} -gt 0 ] ; then |
---|
| 2554 | echo "IGCM_sys_ncwa : ncwa error" |
---|
| 2555 | IGCM_debug_Exit "ncwa" |
---|
[623] | 2556 | fi |
---|
[622] | 2557 | |
---|
[623] | 2558 | IGCM_debug_PopStack "IGCM_sys_ncwa" |
---|
[622] | 2559 | } |
---|
[623] | 2560 | |
---|
| 2561 | ############################################################## |
---|
| 2562 | # CDO OPERATOR |
---|
| 2563 | |
---|
| 2564 | function IGCM_sys_cdo { |
---|
| 2565 | IGCM_debug_PushStack "IGCM_sys_cdo" -- $@ |
---|
| 2566 | if ( $DEBUG_sys ) ; then |
---|
| 2567 | echo "IGCM_sys_cdo :" $@ |
---|
| 2568 | fi |
---|
[713] | 2569 | |
---|
| 2570 | typeset status |
---|
| 2571 | |
---|
| 2572 | \cdo $@ > out_rsync 2>&1 |
---|
| 2573 | status=$? |
---|
| 2574 | if [ ${status} -gt 0 ] ; then |
---|
| 2575 | echo "IGCM_sys_cdo : error code ${status}" |
---|
| 2576 | cat out_rsync |
---|
| 2577 | \rm out_rsync |
---|
[623] | 2578 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 2579 | return 1 |
---|
| 2580 | else |
---|
| 2581 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 2582 | return 0 |
---|
| 2583 | fi |
---|
| 2584 | |
---|
| 2585 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 2586 | } |
---|