source: trunk/libIGCM/libIGCM_sys/libIGCM_sys_brodie.ksh @ 80

Last change on this file since 80 was 80, checked in by sdipsl, 15 years ago

Explicit all MASTER name.
for exemple you can not rcp vargas92, but vargas you can
  • Property licence set to
    The following licence information concerns ONLY the libIGCM tools
    ==================================================================

    Copyright © Centre National de la Recherche Scientifique CNRS
    Commissariat à l'Énergie Atomique CEA

    libIGCM : Library for Portable Models Computation of IGCM Group.

    IGCM Group is the french IPSL Global Climate Model Group.

    This library is a set of shell scripts and functions whose purpose is
    the management of the initialization, the launch, the transfer of
    output files, the post-processing and the monitoring of datas produce
    by any numerical program on any plateforme.

    This software is governed by the CeCILL license under French law and
    abiding by the rules of distribution of free software. You can use,
    modify and/ or redistribute the software under the terms of the CeCILL
    license as circulated by CEA, CNRS and INRIA at the following URL
    "http://www.cecill.info".

    As a counterpart to the access to the source code and rights to copy,
    modify and redistribute granted by the license, users are provided only
    with a limited warranty and the software's author, the holder of the
    economic rights, and the successive licensors have only limited
    liability.

    In this respect, the user's attention is drawn to the risks associated
    with loading, using, modifying and/or developing or reproducing the
    software by the user in light of its specific status of free software,
    that may mean that it is complicated to manipulate, and that also
    therefore means that it is reserved for developers and experienced
    professionals having in-depth computer knowledge. Users are therefore
    encouraged to load and test the software's suitability as regards their
    requirements in conditions enabling the security of their systems and/or
    data to be ensured and, more generally, to use and operate it in the
    same conditions as regards security.

    The fact that you are presently reading this means that you have had
    knowledge of the CeCILL license and that you accept its terms.
  • Property svn:keywords set to Date Author Revision
File size: 30.8 KB
Line 
1#!/bin/ksh
2
3#**************************************************************
4# Author: Sébastien Denvil
5# Contact: sebastien.denvil.@ipsl.jussieu.fr
6# $Date$
7# $Author$
8# $Revision$
9# IPSL (2006)
10#  This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC
11# History:
12# Modification:
13#
14#**************************************************************
15
16#=========================================================
17# The documentation of this file can be automatically generated
18# if you use the prefix #D- for comments to be extracted.
19# Extract with command: cat lib* | grep "^#D-" | cut -c "4-"
20#=========================================================
21
22#D-#=================================================
23#D-LibIGCM_sys for Brodie
24#D-#=================================================
25#D-
26#D- This ksh library if a layer under some usefull
27#D-environment variables and shell commands.
28#D-All those definitions depend on host particularities.
29#D-It manages a stack mechanism and test validity of operations.
30#D-All function described bellow must be prefixed by IGCM_sys.
31
32#====================================================
33# libIGCM_sys PARAMETERS
34#====================================================
35
36#====================================================
37# set DEBUG_sys to true to output calls of function
38typeset -r DEBUG_sys=${DEBUG_sys:=true}
39
40#====================================================
41# Turn in dry run mode ? (sys_Put_Rest, sys_Put_Out, sys_Get)
42typeset -r DRYRUN=${DRYRUN:=0}
43
44# YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE !
45# -------------------------------------------------------------------------------------
46# | DRYRUN=  |  Date computations, | sys_Get    |  Exe    | sys_Put_Out; sys_Put_Rest |
47# |          |  Cp/Exe param files |            |  Chmod  |                           |
48# |          |      Qsub           |            |         |                           |
49# -------------------------------------------------------------------------------------
50# |    0     |       yes           |    yes     |  yes    |      yes                  |
51# -------------------------------------------------------------------------------------
52# |    1     |       yes           |    yes     |  yes    |      no                   |
53# -------------------------------------------------------------------------------------
54# |    2     |       yes           |    yes     |  no     |      no                   |
55# -------------------------------------------------------------------------------------
56# |    3     |       yes           |    no      |  no     |      no                   |
57# -------------------------------------------------------------------------------------
58
59#=====================================================
60# Global Variables :
61#=====================================================
62# Language : "fr" or "en"
63typeset -r MYLANG="fr"
64
65#=====================================================
66# Host and user names
67# $hostname ou hostname
68typeset -r HOST=$( hostname )
69# $username ou whoami
70typeset -r LOGIN=$( whoami )
71# $hostname of the MASTER job
72typeset -r MASTER=brodie
73
74#D-
75#D-#==================================================
76#D-Program used in libIGCM
77#D-#==================================================
78
79# rsync with path
80typeset -r RSYNC=/home/rech/ces/rces452/RSYNC_SX8/bin/rsync
81# RSYNC_opt args to "local rsync"
82typeset -r RSYNC_FRONT="rsh ulam /usr/bin/rsync "
83# RSYNC_opt args to rsync
84typeset -r RSYNC_opt="-va"
85# RSYNC_opt args to "remote rsync"
86# ie storage filesystem
87typeset -r RHOST=gaya.idris.fr
88typeset -r REMOTE_RSYNC=/u/rech/ces/rces452/RSYNC/bin/rsync
89
90#====================================================
91# Host specific DIRECTORIES
92#====================================================
93
94#====================================================
95#- R_EXE   (==> BIN_DIR = ${MODIPSL}/bin )
96typeset -r R_EXE="${MODIPSL}/bin"
97
98#====================================================
99#- SUBMIT_DIR : submission dir
100typeset SUBMIT_DIR=${SUBMIT_DIR:=${PBS_O_WORKDIR}}
101
102#====================================================
103#- ARCHIVE
104typeset -r ARCHIVE=$( rsh gaya -n env | grep PWD | awk "-F=" '{print $2}' )
105
106#====================================================
107#- Mirror libIGCM from brodie to ulam
108typeset -r MirrorlibIGCM=${MirrorlibIGCM:=true}
109
110#====================================================
111#- libIGCM_POST
112PATHlibIGCM=$( echo ${libIGCM} | awk -F"${LOGIN}/" '{print $2}' | sed -e "s&/libIGCM&&" )
113typeset -r libIGCM_POST=${HOME}/${PATHlibIGCM}/libIGCM
114
115#====================================================
116#- IN
117typeset -r R_IN=${R_IN:=/u/rech/psl/rpsl035/IGCM}
118
119#====================================================
120#- OUT
121typeset -r R_OUT=${ARCHIVE}/IGCM_OUT
122
123#====================================================
124#- OUT_POST
125typeset -r R_OUT_POST=$( rsh ulam -n echo $WORKDIR | awk "-F=" "{print $2}" )/IGCM_OUT
126
127#====================================================
128#- RUN_DIR_PATH : Temporary working directory (=> TMP)
129typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${TMPDIR}}
130
131#====================================================
132#- HOST_MPIRUN_COMMAND
133typeset -r HOST_MPIRUN_COMMAND=${HOST_MPIRUN_COMMAND:="mpirun"}
134
135#====================================================
136#- Max number of arguments passed to nco operator or demigration command
137UNIX_MAX_LIMIT=360
138
139#D-#==================================================
140#D-function IGCM_sys_RshArchive
141#D-* Purpose: Archive rsh command
142#D-* Examples:
143#D-
144function IGCM_sys_RshArchive {
145    IGCM_debug_PushStack "IGCM_sys_RshArchive" $@
146    rsh gaya exec /bin/ksh <<-EOF
147    ${@}
148EOF
149    if [ $? -gt 0 ] ; then
150        echo "IGCM_sys_RshArchive : erreur."
151        IGCM_debug_Exit "IGCM_sys_RshArchive"
152    fi
153    IGCM_debug_PopStack "IGCM_sys_RshArchive"
154}
155
156#D-#==================================================
157#D-function IGCM_sys_RshPost
158#D-* Purpose: Post-process rsh command
159#D-* Examples:
160#D-
161function IGCM_sys_RshPost {
162    IGCM_debug_PushStack "IGCM_sys_RshPost" $@
163    if ( $DEBUG_sys ) ; then
164        echo "IGCM_sys_RshPost :" $@
165    fi
166    rsh ulam exec /bin/ksh ${@}
167    if [ $? -gt 0 ] ; then
168        echo "IGCM_sys_RshPost : erreur."
169        IGCM_debug_Exit "IGCM_sys_RshPost"
170    fi
171    IGCM_debug_PopStack "IGCM_sys_RshPost"
172}
173
174#D-#==================================================
175#D-function IGCM_sys_Mkdir
176#D-* Purpose: Master locale mkdir command
177#D-* Examples:
178#D-
179function IGCM_sys_Mkdir {
180    IGCM_debug_PushStack "IGCM_sys_Mkdir" $@
181    if ( $DEBUG_sys ) ; then
182        echo "IGCM_sys_Mkdir :" $@
183    fi
184    if [ ! -d ${1} ]; then
185        \mkdir -p $1
186        if [ $? -gt 0 ] ; then
187            echo "IGCM_sys_Mkdir : erreur."
188            IGCM_debug_Exit "IGCM_sys_Mkdir"
189        fi
190    fi
191    # vérification :
192    if [ ! -d ${1} ] ; then
193        echo "IGCM_sys_Mkdir : erreur."
194        IGCM_debug_Exit "IGCM_sys_Mkdir"
195    fi
196    IGCM_debug_PopStack "IGCM_sys_Mkdir"
197}
198
199#D-#==================================================
200#D-function IGCM_sys_MkdirArchive
201#D-* Purpose: Mkdir on Archive
202#D-* Examples:
203#D-
204function IGCM_sys_MkdirArchive {
205    IGCM_debug_PushStack "IGCM_sys_MkdirArchive" $@
206    if ( $DEBUG_sys ) ; then
207        echo "IGCM_sys_MkdirArchive :" $@
208    fi
209    #- creation de repertoire sur le serveur fichier
210    rsh gaya -n mkdir -p $1
211
212    if [ $? -gt 0 ] ; then
213        echo "IGCM_sys_MkdirArchive : erreur."
214        IGCM_debug_Exit "IGCM_sys_MkdirArchive"
215    fi
216    IGCM_debug_PopStack "IGCM_sys_MkdirArchive"
217}
218
219#D-#==================================================
220#D-function IGCM_sys_MkdirWork
221#D-* Purpose: Mkdir on Work
222#D-* Examples:
223#D-
224function IGCM_sys_MkdirWork {
225    IGCM_debug_PushStack "IGCM_sys_MkdirWork" $@
226    if ( $DEBUG_sys ) ; then
227        echo "IGCM_sys_MkdirWork :" $@
228    fi
229    #- creation de repertoire sur le serveur fichier
230    if [ ! -d ${1} ]; then 
231        \mkdir -p $1
232        if [ $? -gt 0 ] ; then
233            echo "IGCM_sys_MkdirWork : erreur."
234            IGCM_debug_Exit "IGCM_sys_MkdirWork"
235        fi
236    fi
237    # vérification ?? :
238    if [ ! -d ${1} ] ; then
239        echo "IGCM_sys_MkdirWork : erreur."
240        IGCM_debug_Exit "IGCM_sys_MkdirWork"
241    fi
242    IGCM_debug_PopStack "IGCM_sys_MkdirWork"
243}
244#IGCM_sys_MkdirWork ${RUN_DIR_PATH}
245#echo "RUN_DIR_PATH ${RUN_DIR_PATH} ok."
246
247#D-#==================================================
248#D-function IGCM_sys_Cd
249#D-* Purpose: master cd command
250#D-* Examples:
251#D-
252function IGCM_sys_Cd {
253    IGCM_debug_PushStack "IGCM_sys_Cd" $@
254    if ( $DEBUG_sys ) ; then
255        echo "IGCM_sys_Cd :" $@
256    fi
257    \cd $1
258    if [ $? -gt 0 ] ; then
259        echo "IGCM_sys_Cd : erreur."
260        IGCM_debug_Exit "IGCM_sys_Cd"
261    fi
262    IGCM_debug_PopStack "IGCM_sys_Cd"
263}
264
265#D-#==================================================
266#D-function IGCM_sys_Chmod
267#D-* Purpose: Chmod
268#D-* Examples:
269#D-
270function IGCM_sys_Chmod {
271    IGCM_debug_PushStack "IGCM_sys_Chmod" -- $@
272    if ( $DEBUG_sys ) ; then
273        echo "IGCM_sys_Chmod :" $@
274    fi
275    if [ $DRYRUN -le 1 ]; then
276        \chmod $@
277        if [ $? -gt 0 ] ; then
278            echo "IGCM_sys_Chmod : erreur."
279            IGCM_debug_Exit "IGCM_sys_Chmod"
280        fi
281    else
282        ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
283    fi
284    IGCM_debug_PopStack "IGCM_sys_Chmod"
285}
286
287#D-#==================================================
288#D-function IGCM_sys_FileSize
289#D-* Purpose: Filesize
290#D-* Examples:
291#D-
292function IGCM_sys_FileSize {
293    IGCM_debug_PushStack "IGCM_sys_FileSize" $@
294
295    typeset sizeF
296    set +A sizeF -- $( ls -la ${1} )
297    if [ $? -gt 0 ] ; then
298        IGCM_debug_Exit "IGCM_sys_FileSize"
299    fi
300    eval ${2}=${sizeF[4]}
301
302    IGCM_debug_PopStack "IGCM_sys_FileSize"
303}
304
305#D-#==================================================
306#D-function IGCM_sys_TestDir
307#D-* Purpose: Test Directory that must exists
308#D-* Examples:
309#D-
310function IGCM_sys_TestDir {
311    IGCM_debug_PushStack "IGCM_sys_TestDir" $@
312    if ( $DEBUG_sys ) ; then
313        echo "IGCM_sys_TestDir :" $@
314    fi
315    typeset ExistFlag
316    ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 )
317    IGCM_debug_PopStack "IGCM_sys_TestDir"
318
319    return ${ExistFlag}
320}
321
322#D-#==================================================
323#D-function IGCM_sys_TestDirArchive
324#D-* Purpose: Test Directory that must exists on Archive
325#D-* Examples:
326#D-
327function IGCM_sys_TestDirArchive {
328    IGCM_debug_PushStack "IGCM_sys_TestDirArchive" $@
329    if ( $DEBUG_sys ) ; then
330        echo "IGCM_sys_TestDirArchive :" $@
331    fi
332    typeset ExistFlag
333    ExistFlag=$( IGCM_sys_RshArchive "[ -d $1 ] && echo 0 || echo 1" )
334    IGCM_debug_PopStack "IGCM_sys_TestDirArchive"
335
336    return ${ExistFlag}
337}
338
339#D-#==================================================
340#D-function IGCM_sys_TestFileArchive
341#D-* Purpose: Test file that must NOT EXISTS on Archive
342#D-* Examples:
343#D-
344function IGCM_sys_TestFileArchive {
345    IGCM_debug_PushStack "IGCM_sys_TestFileArchive" $@
346    if ( $DEBUG_sys ) ; then
347        echo "IGCM_sys_TestFileArchive :" $@
348    fi
349    typeset ExistFlag
350    ExistFlag=$( IGCM_sys_RshArchive "[ -f $1 ] && echo 0 || echo 1" )
351    IGCM_debug_PopStack "IGCM_sys_TestFileArchive"
352
353    return ${ExistFlag}
354}
355
356#D-#==================================================
357#D-function IGCM_sys_CountFileArchive
358#D-* Purpose: Count files on Archive filesystem
359#D-* Examples:
360#D-
361function IGCM_sys_CountFileArchive {
362    IGCM_debug_PushStack "IGCM_sys_CountFileArchive" $@
363    IGCM_sys_RshArchive "ls ${@} 2>/dev/null | wc -l"
364    if [ $? -gt 0 ] ; then
365        echo "IGCM_sys_CountFileArchive : erreur."
366    fi
367    IGCM_debug_PopStack "IGCM_sys_CountFileArchive"
368}
369
370#D-#==================================================
371#D-function IGCM_sys_Tree
372#D-* Purpose: Tree directories with files on ${ARCHIVE}
373#D-* Examples: IGCM_sys_Tree ${R_IN} ${R_OUT}
374#D-
375function IGCM_sys_Tree {
376    IGCM_debug_PushStack "IGCM_sys_Tree" $@
377    if ( $DEBUG_sys ) ; then
378        echo "IGCM_sys_Tree :" $@
379    fi
380
381    \mfls -r $@
382
383    IGCM_debug_PopStack "IGCM_sys_Tree"
384}
385
386#D-#==================================================
387#D-function IGCM_sys_Tar
388#D-* Purpose: master un-tar command
389#D-* Examples:
390#D-
391function IGCM_sys_Tar {
392    IGCM_debug_PushStack "IGCM_sys_Tar" $@
393    if ( $DEBUG_sys ) ; then
394        echo "IGCM_sys_Tar :" $@
395    fi
396    \tar xvf $1
397    if [ $? -gt 0 ] ; then
398        echo "IGCM_sys_Tar : erreur."
399        IGCM_debug_Exit "IGCM_sys_Tar"
400    fi
401    IGCM_debug_PopStack "IGCM_sys_Tar"
402}
403
404#D-#==================================================
405#D-function IGCM_sys_UnTar
406#D-* Purpose: master un-tar command
407#D-* Examples:
408#D-
409function IGCM_sys_UnTar {
410    IGCM_debug_PushStack "IGCM_sys_UnTar" $@
411    if ( $DEBUG_sys ) ; then
412        echo "IGCM_sys_UnTar :" $@
413    fi
414    \tar xvf $1
415    if [ $? -gt 0 ] ; then
416        echo "IGCM_sys_UnTar : erreur."
417        IGCM_debug_Exit "IGCM_sys_UnTar"
418    fi
419    IGCM_debug_PopStack "IGCM_sys_UnTar"
420}
421
422#D-#==================================================
423#D-function IGCM_sys_Qsub
424#D-* Purpose: Qsub new job
425#D-* Examples:
426#D-
427function IGCM_sys_Qsub {
428    IGCM_debug_PushStack "IGCM_sys_Qsub" $@
429    if ( $DEBUG_sys ) ; then
430        echo "IGCM_sys_Qsub :" $@
431    fi
432    /usr/bin/nqsII/qsub -o ${Script_Output} -N ${config_UserChoices_JobName}.${CumulPeriod} < $1
433    if [ $? -gt 0 ] ; then
434        echo "IGCM_sys_Qsub : erreur -o ${Script_Output} -N ${config_UserChoices_JobName}.${CumulPeriod} $@."
435        IGCM_debug_Exit "IGCM_sys_Qsub"
436    fi
437    IGCM_debug_PopStack "IGCM_sys_Qsub"
438}
439
440#D-#==================================================
441#D-function IGCM_sys_QsubPost
442#D-* Purpose: Qsub new job on scalaire
443#D-* Examples:
444#D-
445function IGCM_sys_QsubPost {
446    IGCM_debug_PushStack "IGCM_sys_QsubPost" $@
447    if ( $DEBUG_sys ) ; then
448        echo "IGCM_sys_QsubPost :" $@
449    fi
450    cd ${POST_DIR}
451    /opt/ibmll/LoadL/full/bin/llsubmit ${libIGCM_POST}/$1.job
452    cd -
453    if [ $? -gt 0 ] ; then
454        echo "IGCM_sys_QsubPost : erreur " $@
455        IGCM_debug_Exit "IGCM_sys_QsubPost"
456    fi
457    IGCM_debug_PopStack "IGCM_sys_QsubPost"
458}
459
460#D-*************************
461#D- File transfer functions
462#D-*************************
463#D-
464
465#D-#==================================================
466#D-function IGCM_sys_Rsync_out
467#D-* Purpose: treat return val of rsync
468#D-* Examples: IGCM_sys_Rsync_out out_RET_rsync
469#D-  Error values and explanations can depend on your system version.
470function IGCM_sys_Rsync_out {
471    RET=$1
472    if [ ! $RET ] ; then
473        echo "rsync error !"
474    fi
475
476    if [ $MYLANG = "fr" ]; then
477        case $RET in
478            0)  return ;;
479            1)  echo "Erreur de rsync ; RERR_SYNTAX : "
480                echo "Erreur de syntaxe ou d'utilisation."
481                return;;
482            2)  echo "Erreur de rsync ; RERR_PROTOCOL : "
483                echo "Incompatibilité de protocole."
484                return;;
485            3)  echo "Erreur de rsync ; RERR_FILESELECT 3"
486                echo "Erreurs  lors  de  la  sélection des fichiers d'entrée sortie et"
487                echo "répertoires"
488                return;;
489            4)  echo "Erreur de rsync ; RERR_UNSUPPORTED"
490                echo "Action demandée non supportée : une tentative de manipulation de"
491                echo "fichiers  64-bits  sur une plate-forme qui ne les supporte pas a"
492                echo "été faite ; ou une option qui est supportée par le  client  mais"
493                echo "pas par le serveur a été spécifiée."
494                return;;
495            10) echo "Erreur de rsync ; RERR_SOCKETIO"
496                echo "Erreur dans le socket d'entrée sortie"
497                return;;
498            11) echo "Erreur de rsync ; RERR_FILEIO"
499                echo "Erreur d'entrée sortie fichier"
500                return;;
501            12) echo "Erreur de rsync ; RERR_STREAMIO"
502                echo "Erreur dans flux de donnée du protocole rsync"
503                return;;
504            13) echo "Erreur de rsync ; RERR_MESSAGEIO"
505                echo "Erreur avec les diagnostics du programme"
506                return;;
507            14) echo "Erreur de rsync ; RERR_IPC"
508                echo "Erreur dans le code IPC"
509                return;;
510            20) echo "Erreur de rsync ; RERR_SIGNAL"
511                echo "SIGUSR1 ou SIGINT reçu"
512                return;;
513            21) echo "Erreur de rsync ; RERR_WAITCHILD"
514                echo "Une erreur retournée par waitpid()"
515                return;;
516            22) echo "Erreur de rsync ; RERR_MALLOC"
517                echo "Erreur lors de l'allocation des tampons de mémoire de coeur"
518                return;;
519            23) echo ""
520                echo "Erreur fichier inexistant"
521                return;;
522            30) echo "Erreur de rsync ; RERR_TIMEOUT"
523                echo "Temps d'attente écoulé dans l'envoi/réception de données"
524                return;;
525            *)  echo "Erreur de rsync : code de retour de rsync inconnu :" $RET
526                return;;
527        esac
528    elif [ $MYLANG = "en" ] ; then
529        case $RET in
530            0)  return;;               
531            1)  echo "rsync error : Syntax or usage error "
532                return;;
533            2)  echo "rsync error : Protocol incompatibility "
534                return;;
535            3)  echo "rsync error : Errors selecting input/output files, dirs"
536                return;;
537            4)  echo "rsync error : Requested action not supported: an attempt"
538                echo "was made to manipulate 64-bit files on a platform that cannot support"
539                echo "them; or an option was specified that is supported by the client and"
540                echo "not by the server."
541                return;;
542            5)  echo "rsync error : Error starting client-server protocol"
543                return;;
544            10) echo "rsync error : Error in socket I/O "
545                return;;
546            11) echo "rsync error : Error in file I/O "
547                return;;
548            12) echo "rsync error : Error in rsync protocol data stream "
549                return;;
550            13) echo "rsync error : Errors with program diagnostics "
551                return;;
552            14) echo "rsync error : Error in IPC code "
553                return;;
554            20) echo "rsync error : Received SIGUSR1 or SIGINT "
555                return;;
556            21) echo "rsync error : Some error returned by waitpid() "
557                return;;
558            22) echo "rsync error : Error allocating core memory buffers "
559                return;;
560            23) echo "rsync error : Partial transfer due to error"
561                return;;
562            24) echo "rsync error : Partial transfer due to vanished source files"
563                return;;
564            30) echo "rsync error : Timeout in data send/receive "
565                return;;
566            *)  echo "rsync error : return code of rsync unknown :" $RET
567                return;;
568        esac
569    else
570        echo "unknown language $MYLANG."
571        return
572    fi
573}
574   
575
576#D-#==================================================
577#D-function IGCM_sys_Miror_libIGCM
578#D-* Purpose: Mirror libIGCM PATH and lib to ulam
579#D-* Examples:
580#D-
581function IGCM_sys_Mirror_libIGCM {
582    IGCM_debug_PushStack "IGCM_sys_Mirror_libIGCM"
583    if ( $DEBUG_sys ) ; then
584        echo "IGCM_sys_Mirror_libIGCM"
585    fi
586
587    typeset RET DEST
588
589    IGCM_sys_RshPost <<-EOF
590    mkdir -p ${PATHlibIGCM}
591EOF
592    rsh ulam -n hostname > /dev/null 2>&1
593    RET=$?
594    if [ $RET -eq 0 ] ; then
595#       echo rcp -r ${libIGCM} ulam:${HOME}/${PATHlibIGCM} > out_rsync 2>&1
596#       rcp -r ${libIGCM} ulam:${HOME}/${PATHlibIGCM} >> out_rsync 2>&1
597        echo ${RSYNC} ${RSYNC_opt} -e "rsh " ${libIGCM} ulam:${HOME}/${PATHlibIGCM} > out_rsync 2>&1
598        ${RSYNC} ${RSYNC_opt} -e "rsh " ${libIGCM} ulam:${HOME}/${PATHlibIGCM} >> out_rsync 2>&1
599        RET=$?
600
601        if [ ${RET} -gt 0 ] ; then
602            echo "IGCM_sys_Mirror_libIGCM Warning : no libIGCM on ulam."
603            cat out_rsync
604        fi
605    else
606        echo "No POST-TREATMENT avaible because ulam is down."
607    fi
608    IGCM_debug_PopStack "IGCM_sys_Mirror_libIGCM"
609}
610
611#====================================================
612#- Call IGCM_sys_Mirror_libIGCM now !
613if ( $MirrorlibIGCM ) ; then
614    IGCM_sys_Mirror_libIGCM
615fi
616
617#D-#==================================================
618#D-function IGCM_sys_Cp
619#D-* Purpose: generic cp
620#D-* Examples:
621#D-
622function IGCM_sys_Cp {
623    IGCM_debug_PushStack "IGCM_sys_Cp" $@
624    if ( $DEBUG_sys ) ; then
625        echo "IGCM_sys_Cp :" $@
626    fi
627
628    typeset RET
629
630    echo cp $@ > out_rsync 2>&1
631    \cp $@ >> out_rsync 2>&1
632    RET=$?
633
634    if [ ${RET} -gt 0 ] ; then
635        echo "IGCM_sys_Cp : error."
636        cat out_rsync
637        IGCM_debug_Exit "IGCM_sys_Cp"
638    fi
639    IGCM_debug_PopStack "IGCM_sys_Cp"
640}
641
642#D-#==================================================
643#D-function IGCM_sys_Mv
644#D-* Purpose: generic move
645#D-* Examples:
646#D-
647function IGCM_sys_Mv {
648    IGCM_debug_PushStack "IGCM_sys_Mv" $@
649    if ( $DEBUG_sys ) ; then
650        echo "IGCM_sys_Mv :" $@
651    fi
652
653    typeset RET
654
655    echo mv $@ > out_rsync 2>&1
656    \mv $@ >> out_rsync 2>&1
657    RET=$?
658
659    if [ ${RET} -gt 0 ] ; then
660        echo "IGCM_sys_Mv : error in mv."
661        cat out_rsync
662        IGCM_debug_Exit "IGCM_sys_Mv"
663    fi
664
665    IGCM_debug_PopStack "IGCM_sys_Mv"
666}
667
668#D-#==================================================
669#D-function IGCM_sys_Put_Dir
670#D-* Purpose: Copy a complete directory on $(ARCHIVE)
671#D-* Examples:
672#D-
673function IGCM_sys_Put_Dir {
674    IGCM_debug_PushStack "IGCM_sys_Put_Dir" $@
675    if ( $DEBUG_sys ) ; then
676        echo "IGCM_sys_Put_Dir :" $@
677    fi
678    if [ $DRYRUN = 0 ]; then
679        if [ ! -d ${1} ] ; then
680            echo "WARNING : IGCM_sys_Put_Dir ${1} DOES NOT EXIST ."
681            IGCM_debug_PopStack "IGCM_sys_Put_Dir"
682            return
683        fi
684
685        typeset RET
686
687        # Only if we use rsync
688        #IGCM_sys_TestDirArchive $( dirname $2 )
689        #
690        #USUAL WAY
691        rcp -r $1 gaya:$2 > out_rsync 2>&1
692        RET=$?
693
694        if [ ${RET} -gt 0 ] ; then
695            echo "IGCM_sys_Put_Dir : error."
696            cat out_rsync
697            IGCM_debug_Exit "IGCM_sys_Put_Dir"
698        fi
699    else
700        ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
701    fi
702    IGCM_debug_PopStack "IGCM_sys_Put_Dir"
703}
704
705#D-#==================================================
706#D-function IGCM_sys_Get_Dir
707#D-* Purpose: Copy a complete directory from $(ARCHIVE)
708#D-* Examples:
709#D-
710function IGCM_sys_Get_Dir {
711    IGCM_debug_PushStack "IGCM_sys_Get_Dir" $@
712    if ( $DEBUG_sys ) ; then
713        echo "IGCM_sys_Get_Dir :" $@
714    fi
715    if [ $DRYRUN = 0 ]; then
716        if [ ! -d ${1} ] ; then
717            echo "WARNING : IGCM_sys_Get_Dir ${1} DOES NOT EXIST ."
718            IGCM_debug_PopStack "IGCM_sys_Get_Dir"
719            return
720        fi
721
722        typeset RET
723
724        #USUAL WAY
725        rcp -rp gaya:$1 $2 > out_rsync 2>&1
726        RET=$?
727
728        if [ ${RET} -gt 0 ] ; then
729            echo "IGCM_sys_Get_Dir : error."
730            cat out_rsync
731            IGCM_debug_Exit "IGCM_sys_Get_Dir"
732        fi
733    else
734        ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
735    fi
736    IGCM_debug_PopStack "IGCM_sys_Get_Dir"
737}
738
739#D-#==================================================
740#D-function IGCM_sys_Put_Rest
741#D-* Purpose: Put computied restarts on $(ARCHIVE).
742#D-           File and target directory must exist.
743#D-* Examples:
744#D-
745function IGCM_sys_Put_Rest {
746    IGCM_debug_PushStack "IGCM_sys_Put_Rest" $@
747    if ( $DEBUG_sys ) ; then
748        echo "IGCM_sys_Put_Rest :" $@
749    fi
750    if [ $DRYRUN = 0 ]; then
751        if [ ! -f ${1} ] ; then
752            echo "ERROR : IGCM_sys_Put_Rest ${1} DOES NOT EXIST ."
753            IGCM_debug_Exit "IGCM_sys_Put_Rest"
754        fi
755
756        typeset RET
757        #
758        IGCM_sys_Chmod 444 ${1}
759        #
760        # Only if we use rsync
761        #IGCM_sys_MkdirArchive $( dirname $2 )
762        #
763        #USUAL WAY
764        mfput $1 $2 > out_rsync 2>&1
765        RET=$?
766
767#       #RSYNC WITH NETWORK RSH CALL
768#       echo ${RSYNC_FRONT} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RUN_DIR}/$1 ${RHOST}:${2} > out_rsync 2>&1
769#       ${RSYNC_FRONT} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RUN_DIR}/$1 ${RHOST}:${2} >> out_rsync 2>&1
770
771#       #RSYNC WITH NFS USE
772#       echo ${RSYNC_FRONT} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1
773#       ${RSYNC_FRONT} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1
774       
775#       RET=$?
776#       IGCM_sys_Rsync_out $RET
777
778#       ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync
779#       (( RET=RET+$? ))
780
781        if [ ${RET} -gt 0 ] ; then
782            echo "IGCM_sys_Put_Rest : error."
783            cat out_rsync
784            IGCM_debug_Exit "IGCM_sys_Put_Rest"
785        fi
786    else
787        ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
788    fi
789    IGCM_debug_PopStack "IGCM_sys_Put_Rest"
790}
791
792#D-#==================================================
793#D-function IGCM_sys_Put_Out
794#D-* Purpose: Copy a file on $(ARCHIVE) after have chmod it in readonly
795#D-* Examples:
796#D-
797function IGCM_sys_Put_Out {
798    IGCM_debug_PushStack "IGCM_sys_Put_Out" $@
799    if ( $DEBUG_sys ) ; then
800        echo "IGCM_sys_Put_Out :" $@
801    fi
802    if [ $DRYRUN = 0 ]; then
803        if [ ! -f ${1} ] ; then
804            echo "WARNING : IGCM_sys_Put_Out ${1} DOES NOT EXIST ."
805            IGCM_debug_PopStack "IGCM_sys_Put_Out"
806            return 1
807        fi
808
809        typeset RET
810        #
811        IGCM_sys_Chmod 444 ${1}
812        #
813        # Only if we use rsync
814        #IGCM_sys_MkdirArchive $( dirname $2 )
815        #
816        #USUAL WAY
817        mfput $1 $2 > out_rsync 2>&1
818        RET=$?
819
820#       #RSYNC WITH NETWORK RSH CALL
821#       echo ${RSYNC_FRONT} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RUN_DIR}/$1 ${RHOST}:${2} > out_rsync 2>&1
822#       ${RSYNC_FRONT} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RUN_DIR}/$1 ${RHOST}:${2} >> out_rsync 2>&1
823
824#       #RSYNC WITH NFS USE
825#       echo ${RSYNC_FRONT} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1
826#       ${RSYNC_FRONT} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1
827
828#       RET=$?
829#       IGCM_sys_Rsync_out $RET
830
831#       ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync
832#       (( RET=RET+$? ))
833
834        if [ ${RET} -gt 0 ] ; then
835            echo "IGCM_sys_Put_Out : error."
836            cat out_rsync
837            IGCM_debug_Exit "IGCM_sys_Put_Out"
838        fi
839    else
840        ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
841    fi
842    IGCM_debug_PopStack "IGCM_sys_Put_Out"
843    return 0
844}
845
846#D-#==================================================
847#D-function IGCM_sys_Get
848#D-* Purpose: Get a file from ${ARCHIVE}
849#D-* Examples: IGCM_sys_Get myfile /destpath/myfile_with_PREFIX
850#D-            IGCM_sys_Get /l Array_contain_myfiles /destpath/
851function IGCM_sys_Get {
852    IGCM_debug_PushStack "IGCM_sys_Get" $@
853
854    typeset DEST RET dm_liste ifile target
855
856    if ( $DEBUG_sys ) ; then
857        echo "IGCM_sys_Get :" $@
858    fi
859    if [ $DRYRUN -le 2 ]; then
860        if [ X${1} = X'/l' ] ; then
861            # test if the first file is present in the old computation :
862            eval set +A dm_liste \${${2}}
863        else
864            dm_liste=${1}
865        fi
866        eval DEST=\${${#}}
867
868        # test if the (first) file is present in the old computation :
869        IGCM_sys_TestFileArchive ${dm_liste[0]}
870        RET=$?
871        if [ ${RET} -gt 0 ] ; then
872            echo "IGCM_sys_Get, ERROR : regular file ${dm_liste[0]} DOES NOT EXIST ."
873            IGCM_debug_Exit "IGCM_sys_Get"
874            return
875        fi
876
877        # SD : dm_liste is not suited for computing job
878        #      because we change filename during transfert
879        #      dm_liste is better suited for post-treatment
880        #dm_liste=" "
881        #(( ifile=1 ))
882        #while [ $ifile -lt $# ] ; do
883        #    dm_liste=$( eval echo ${dm_liste} " "\${${ifile}} )
884        #    (( ifile = ifile + 1 ))
885        #done
886        #DEST=$( eval echo \${${#}} )
887
888        #USUAL WAY
889        mfget ${dm_liste[*]} ${DEST} > out_rsync 2>&1
890        #mfget $1 $2 > out_rsync 2>&1
891        RET=$?
892
893#       #RSYNC WITH NETWORK RSH CALL
894#       echo ${RSYNC_FRONT} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RHOST}:"${dm_liste}" ${RHOST}:${RUN_DIR}/${DEST} > out_rsync 2>&1
895#       ${RSYNC_FRONT} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RHOST}:"${dm_liste}" ${RHOST}:${RUN_DIR}/${DEST} >> out_rsync 2>&1
896
897#       #RSYNC WITH NFS USE
898#       echo ${RSYNC_FRONT} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} > out_rsync 2>&1
899#       ${RSYNC_FRONT} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} >> out_rsync 2>&1
900
901#       RET=$?
902#       IGCM_sys_Rsync_out $RET
903
904#       ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync
905#       (( RET=RET+$? ))
906
907        if [ ${RET} -gt 0 ] ; then
908            echo "IGCM_sys_Get : copy error."
909            cat out_rsync
910            IGCM_debug_Exit "IGCM_sys_Get"
911        fi
912    else
913        ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
914    fi
915    IGCM_debug_PopStack "IGCM_sys_Get"
916}
917
918############################################################## A REVOIR !!
919
920#D-#==================================================
921#D-function IGCM_sys_Rapatrie
922#D-* Purpose: Rapatrie
923#D-* Examples:
924#D-
925function IGCM_sys_Rapatrie {
926    IGCM_debug_PushStack "IGCM_sys_Rapatrie" $@
927    if ( $DEBUG_sys ) ; then
928        echo "IGCM_sys_Rapatrie :" $@
929    fi
930
931    typeset RET=0
932
933    IGCM_sys_Get ${R_STOCKAGE}/$2 $1 ;
934    let $(( RET=RET+$? ))
935    IGCM_sys_Cd $1 ;
936    let $(( RET=RET+$? ))
937    IGCM_sys_UnTar $2 ;
938    let $(( RET=RET+$? ))
939
940    if [ ${RET} -gt 0 ] ; then
941        echo "IGCM_sys_Rapatrie : erreur."
942        IGCM_debug_Exit "IGCM_sys_Rapatrie"
943    fi
944    IGCM_debug_PopStack "IGCM_sys_Rapatrie"
945}
946
947############################################################## A FINIR !!
948
949#D-#==================================================
950#D-function IGCM_sys_GetDate_FichWork
951#D-* Purpose: donne la date filesys d'un fichier sur le filesystem WORK
952#D-* Examples:
953#D-
954function IGCM_sys_GetDate_FichWork {
955    IGCM_debug_PushStack "IGCM_sys_FichWork" $@
956    if ( $DEBUG_sys ) ; then
957        echo "IGCM_sys_GetDate_FichWork :" $@
958    fi
959    # donne la date filesys d'un fichier sur la machine work
960    IGCM_debug_PopStack "IGCM_sys_FichWork"
961}
962
963#D-#==================================================
964#D-function IGCM_sys_GetDate_FichArchive
965#D-* Purpose: donne la date filesys d'un fichier sur le filesystem ARCHIVE
966#D-* Examples:
967#D-
968function IGCM_sys_GetDate_FichArchive {
969    IGCM_debug_PushStack "IGCM_sys_FichArchive" $@
970    if ( $DEBUG_sys ) ; then
971        echo "IGCM_sys_GetDate_FichArchive :" $@
972    fi
973    IGCM_debug_PopStack "IGCM_sys_FichArchive"
974}
975
976##############################################################
977# REBUILD OPERATOR
978
979function IGCM_sys_rebuild {
980    IGCM_debug_PushStack "IGCM_sys_rebuild" -- $@
981    if ( $DEBUG_sys ) ; then
982        echo "IGCM_sys_rebuild :" $@
983    fi
984    /home/rech/psl/rpsl035/SX/bin/rebuild -f -o $@
985    if [ $? -gt 0 ] ; then
986       echo "IGCM_sys_rebuild : erreur ${@}."
987       IGCM_debug_Exit "rebuild"
988    fi
989
990    IGCM_debug_PopStack "IGCM_sys_rebuild"
991}
992
993############################################################
994# Activate Running Environnment Variables
995
996function IGCM_sys_activ_variables {
997    IGCM_debug_PushStack "IGCM_sys_activ_variables"
998    if ( $DEBUG_sys ) ; then
999        echo "IGCM_sys_activ_variables "
1000    fi
1001
1002# --------------------------------------------------------------------
1003#D- MPI specifications
1004# --------------------------------------------------------------------
1005
1006#D-- MPISUSPEND
1007    export MPISUSPEND=ON
1008#D-- MPIPROGINF
1009    export MPIPROGINF=ALL
1010
1011# --------------------------------------------------------------------
1012#D- Other specifications
1013# --------------------------------------------------------------------
1014
1015#D- max number of character/line in output job
1016    export F_SYSLEN=5000
1017#D- number of error that can be admitted on the NEC
1018    export F_ERRCNT=0
1019#D- global performance
1020    export F_PROGINF=DETAIL
1021#D- activate ftrace (with -ftrace)
1022    export F_FTRACE=YES
1023#D- communication information (with -ftrace)
1024    export MPICOMMINF=ALL
1025#D- I/O performance (FORTRAN I/O only not netCDF)
1026    export F_FILEINF=NO
1027# netCDF I/O performance
1028    export NC_FILEINF=NO   
1029
1030    IGCM_debug_PopStack "IGCM_sys_activ_variables"
1031
1032}
1033
1034############################################################
1035# Desactivate Running Environnment Variables
1036
1037function IGCM_sys_desactiv_variables {
1038    IGCM_debug_PushStack "IGCM_sys_desactiv_variables"
1039    if ( $DEBUG_sys ) ; then
1040        echo "IGCM_sys_desactiv_variables "
1041    fi
1042# --------------------------------------------------------------------
1043#D- MPI specifications
1044# --------------------------------------------------------------------
1045
1046#D-- MPIPROGINF
1047    export MPIPROGINF=NO
1048
1049# --------------------------------------------------------------------
1050#D- Other specifications
1051# --------------------------------------------------------------------
1052
1053#D- global performance
1054    export F_PROGINF=NO 
1055
1056    IGCM_debug_PopStack "IGCM_sys_desactiv_variables"
1057 
1058}
1059
1060############################################################
1061# Build run file
1062
1063function IGCM_sys_build_run_file {
1064    IGCM_debug_PushStack "IGCM_sys_build_run_file" $@
1065    if ( $DEBUG_sys ) ; then
1066        echo "IGCM_sys_build_run_file " $@
1067    fi
1068    (( NUM_PROC_ATM = BATCH_NUM_PROC_TOT - 1 ))
1069    (( NUM_PROC_OASIS = BATCH_NUM_PROC_TOT - NUM_PROC_ATM ))
1070    (( NUM_PROC_OCE = BATCH_NUM_PROC_TOT - NUM_PROC_ATM ))
1071   
1072    if [ $1 = MPI2 ]; then
1073        cat <<EOF > run_file
1074-p 1 -np 1 -e ./oasis
1075EOF
1076        (( NUM_PROCESS = BATCH_NUM_PROC_TOT + 1 ))
1077        config_UserChoices_JobRunOptions='"-max_np ${NUM_PROCESS} -f"'
1078
1079    elif [ $1 = MPI1 ]; then
1080        cat <<EOF > run_file
1081-p $NUM_PROC_OASIS -e ./oasis
1082-p $NUM_PROC_ATM -e ./lmdz.x
1083-p $NUM_PROC_OCE -e ./opa.xx
1084EOF
1085 
1086    fi
1087
1088    IGCM_debug_PopStack "IGCM_sys_build_run_file"
1089 
1090}
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