#!/bin/ksh #************************************************************** # Author: Sebastien Denvil, Sonia Labetoulle, Nicolas Lebas, Sebastien Nguyen # Contact: Nicolas.Lebas__at__locean-ipsl.upmc.fr # $Revision:: $ Revision of last commit # $Author:: $ Author of last commit # $Date:: $ Date of last commit # IPSL (2012) # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC # # >>> Date ensemble <<< # Author: Nicolas Lebas (adapted from Sonia Labetoulle) # Contact: Nicolas.Lebas__at__locean-ipsl.upmc.fr # IPSL (2014) # # >>> Add 3D perturbation maps to oceanic restart <<< # Author: Sebastien Nguyen # Contact: Sebastien.Nguyen__at__locean-ipsl.upmc.fr # IPSL (2014) # #************************************************************** # Read which ensemble type are active function IGCM_ensemble_Init { IGCM_debug_PushStack "IGCM_ensemble_Init" IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB active IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE active IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PARAMETRIC active IGCM_debug_Print 1 "Ens_PERTURB ACTIVE = ${ensemble_Ens_PERTURB_active}" IGCM_debug_Print 1 "Ens_DATE ACTIVE = ${ensemble_Ens_DATE_active}" IGCM_debug_Print 1 "Ens_PARAMETRIC ACTIVE = ${ensemble_Ens_PARAMETRIC_active}" echo "" #==================================================== # Define ARCHIVE : Dedicated to large files # Define STORAGE : Dedicated to small/medium files # Define R_OUT : Output tree located on ARCHIVE # Define R_FIG : Output tree located on STORAGE hosting figures (monitoring and atlas, and/or small files) # Define R_BUF : USELESS and DEPRECATED output tree. IGCM_sys_defineArchives IGCM_debug_PopStack "IGCM_ensemble_Init" } # Set Alphanumerical variables ajust to member nb function IGCM_ensemble_SetAlpha { IGCM_debug_PushStack "IGCM_ensemble_SetAlpha" set -A Alpha A B C D E F G H I J K L M N O P Q R S T U V W X Y Z set -A AlphaMonth a b c d e f g h i j k l IGCM_debug_PopStack "IGCM_ensemble_SetAlpha" } ############### Perturb ENSEMBLE ################# function IGCM_ensemble_CastInit { IGCM_debug_PushStack "IGCM_ensemble_CastInit" IGCM_sys_Mkdir ${RUN_DIR} IGCM_sys_Cp ${SUBMIT_DIR}/config.card ${RUN_DIR} IGCM_sys_Cp ${SUBMIT_DIR}/ensemble.card ${RUN_DIR} IGCM_sys_Cp ${SUBMIT_DIR}/Job_* ${RUN_DIR} IGCM_sys_Cp ${SUBMIT_DIR}/run.card.init ${RUN_DIR} if [ -f ${SUBMIT_DIR}/Qsub.* ]; then IGCM_sys_Cp ${SUBMIT_DIR}/Qsub.* ${RUN_DIR} fi if [ -f ${SUBMIT_DIR}/Qclean.* ]; then IGCM_sys_Cp ${SUBMIT_DIR}/Qclean.* ${RUN_DIR} fi ## Init some variables CastPeriodicStart=false CastNonPeriodicStart=false CastRestartNonPer=false CastLengthNonPer=false # Useful? #if [ -f ${SUBMIT_DIR}/CreatedDir.txt ] ; then # IGCM_sys_Cp ${SUBMIT_DIR}/CreatedDir.txt ${RUN_DIR} #fi # Useful? #if [ -f ${SUBMIT_DIR}/Qsub.sh ] ; then # IGCM_sys_Cp ${SUBMIT_DIR}/Qsub.sh ${RUN_DIR} #fi echo ${PWD} IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB active IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB NAME IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB BEGIN_INIT IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB END_INIT IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB PERIODICITY IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_PERTURB NONPERIODIC IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_PERTURB RESTART_NONPERIODIC IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB LENGTH IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_PERTURB LENGTH_NONPERIODIC IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB MEMBER IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_PERTURB PERTU_MAP_LIST IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_PERTURB MEMBER_NAMESLIST IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB MEMBER_INITFROM IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB MEMBER_INITPATH IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_PERTURB PERTURB_BIN IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB INITFROM IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB INITPATH IGCM_card_DefineVariableFromOption config.card UserChoices JobName IGCM_card_DefineVariableFromOption config.card UserChoices TagName IGCM_card_DefineVariableFromOption config.card UserChoices CalendarType IGCM_card_DefineArrayFromSection config.card ListOfComponents echo IGCM_debug_Print 1 "[Ens_PERTURB]" IGCM_debug_Print 1 "ACTIVE = ${ensemble_Ens_PERTURB_active}" IGCM_debug_Print 1 "NAME = ${ensemble_Ens_PERTURB_NAME}" IGCM_debug_Print 1 "BEGIN_INIT = ${ensemble_Ens_PERTURB_BEGIN_INIT}" IGCM_debug_Print 1 "END_INIT = ${ensemble_Ens_PERTURB_END_INIT}" IGCM_debug_Print 1 "PERIODICITY = ${ensemble_Ens_PERTURB_PERIODICITY}" IGCM_debug_Print 1 "NONPERIODIC = ${ensemble_Ens_PERTURB_NONPERIODIC[*]}" IGCM_debug_Print 1 "RESTART_NONPERIODIC=${ensemble_Ens_PERTURB_RESTART_NONPERIODIC[*]}" IGCM_debug_Print 1 "LENGTH = ${ensemble_Ens_PERTURB_LENGTH}" IGCM_debug_Print 1 "LENGTH_NONPERIODIC= ${ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[*]}" IGCM_debug_Print 1 "MEMBER = ${ensemble_Ens_PERTURB_MEMBER}" IGCM_debug_Print 1 "PERTU_MAP_LIST = ${ensemble_Ens_PERTURB_PERTU_MAP_LIST[*]}" IGCM_debug_Print 1 "MEMBER_NAMESLIST = ${ensemble_Ens_PERTURB_MEMBER_NAMESLIST[*]}" IGCM_debug_Print 1 "MEMBER_INITFROM = ${ensemble_Ens_PERTURB_MEMBER_INITFROM}" IGCM_debug_Print 1 "MEMBER_INITPATH = ${ensemble_Ens_PERTURB_MEMBER_INITPATH}" IGCM_debug_Print 1 "PERTURB_BIN = ${ensemble_Ens_PERTURB_PERTURB_BIN[*]}" IGCM_debug_Print 1 "INITFROM = ${ensemble_Ens_PERTURB_INITFROM}" IGCM_debug_Print 1 "INITPATH = ${ensemble_Ens_PERTURB_INITPATH}" IGCM_debug_Print 1 "JobName = ${config_UserChoices_JobName}" IGCM_debug_Print 1 "TagName = ${config_UserChoices_TagName}" IGCM_debug_Print 1 "CalendarType = ${config_UserChoices_CalendarType}" IGCM_debug_Print 1 "ListOfComponents = ${config_ListOfComponents[*]}" ### Retro compatibility with former param name ### if [ X"${ensemble_Ens_PERTURB_MEMBER_LIST[0]}" != "XOption" ]; then if [ X"${ensemble_Ens_PERTURB_PERTU_MAP_LIST[0]}" = "XOption" ]; then ensemble_Ens_PERTURB_PERTU_MAP_LIST=${ensemble_Ens_PERTURB_MEMBER_LIST} IGCM_debug_Print 1 "WARNING: PERTU_MAP_LIST is deprecacated, please use PERTURB_PERTU_MAP_LIST instead." else IGCM_debug_Print 1 "WARNING: both PERTURB_PERTU_MAP_LIST and PERTU_MAP_LIST are specified!" IGCM_debug_Print 1 "Ignore PERTU_MAP_LIST which is deprecated." fi fi ####### End of retro compatibility code ####### ### Check unset variables and set them to empty # Following var are set because they could be unset in some # use case (ex: non periodic if periodic is active...) if [[ X"${ensemble_Ens_PERTURB_RESTART_NONPERIODIC[0]}" = "XOption" || X"${ensemble_Ens_PERTURB_RESTART_NONPERIODIC[0]}" = "X" ]]; then ensemble_Ens_PERTURB_RESTART_NONPERIODIC[0]=_0_ CastRestartNonPer=false else CastRestartNonPer=true fi if [[ X"${ensemble_Ens_PERTURB_PERTU_MAP_LIST[0]}" = "XOption" || X"${ensemble_Ens_PERTURB_PERTU_MAP_LIST[0]}" = "X" ]]; then ensemble_Ens_PERTURB_PERTU_MAP_LIST[0]=_0_ fi if [[ X"${ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[0]}" = "XOption" || X"${ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[0]}" = "X" ]]; then CastLengthNonPer=false ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[0]=_0_ else CastLengthNonPer=true fi if [ X"${ensemble_Ens_PERTURB_NONPERIODIC[0]}" = "XOption" ]; then ensemble_Ens_PERTURB_NONPERIODIC[0]=_0_ fi if [[ "${ensemble_Ens_PERTURB_PERIODICITY}" = _0_ || "${ensemble_Ens_PERTURB_PERIODICITY}" = '' ]]; then ensemble_Ens_PERTURB_PERIODICITY=NONE fi if [[ "${ensemble_Ens_PERTURB_MEMBER}" = _0_ || "${ensemble_Ens_PERTURB_MEMBER}" = '' ]]; then ensemble_Ens_PERTURB_MEMBER=NONE fi if [[ "${ensemble_Ens_PERTURB_END_INIT}" = _0_ || "${ensemble_Ens_PERTURB_END_INIT}" = '' ]]; then ensemble_Ens_PERTURB_END_INIT=${ensemble_Ens_PERTURB_BEGIN_INIT} fi ### End check unset variables ### PerturbExe=${ensemble_Ens_PERTURB_PERTURB_BIN[0]} case ${PerturbExe} in AddNoise) PerturbComp=${ensemble_Ens_PERTURB_PERTURB_BIN[1]} PerturbFile=${ensemble_Ens_PERTURB_PERTURB_BIN[2]} PerturbVar=${ensemble_Ens_PERTURB_PERTURB_BIN[3]} PerturbAmp=${ensemble_Ens_PERTURB_PERTURB_BIN[4]} IGCM_debug_Print 1 "PerturbExe = ${PerturbExe}" IGCM_debug_Print 1 "PerturbFile = ${PerturbFile}" IGCM_debug_Print 1 "PerturbComp = ${PerturbComp}" IGCM_debug_Print 1 "PerturbVar = ${PerturbVar}" IGCM_debug_Print 1 "PerturbAmp = ${PerturbAmp}" ;; AddPertu3DOCE) PerturbComp=${ensemble_Ens_PERTURB_PERTURB_BIN[1]} PerturbFile=${ensemble_Ens_PERTURB_PERTURB_BIN[2]} PerturbVar=${ensemble_Ens_PERTURB_PERTURB_BIN[3]} PerturbMask=${ensemble_Ens_PERTURB_PERTURB_BIN[4]} IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_PERTURB MASKPATH IGCM_debug_Print 1 "PerturbExe = ${PerturbExe}" IGCM_debug_Print 1 "PerturbFile = ${PerturbFile}" IGCM_debug_Print 1 "PerturbComp = ${PerturbComp}" IGCM_debug_Print 1 "PerturbVar = ${PerturbVar}" IGCM_debug_Print 1 "PerturbMask = ${PerturbMask}" IGCM_debug_Print 1 "MASK PATH = ${ensemble_Ens_PERTURB_MASKPATH}" ;; esac IGCM_ensemble_SetAlpha ${ensemble_Ens_PERTURB_MEMBER} # A few checks Period case: # ... Check PERIODICITY ... case ${ensemble_Ens_PERTURB_PERIODICITY} in NONE) IGCM_debug_Print 1 "periodic start not active" CastPeriodicStart=false ;; *[Yy]|*[Mm]) CastPeriodicStart=true IGCM_debug_Print 1 "Periodic length : ${ensemble_Ens_PERTURB_PERIODICITY}" ;; *) IGCM_debug_Exit "IGCM_ensemble_CastInit ${ensemble_Ens_PERTURB_PERIODICITY} : invalid PERIODICITY" IGCM_debug_Exit "Choose a value in *Y or *M" IGCM_debug_Verif_Exit ;; esac # ... Check LENGTH ... case ${ensemble_Ens_PERTURB_LENGTH} in *[Yy]|*[Mm]) IGCM_debug_Print 1 "Periodic duration : ${ensemble_Ens_PERTURB_LENGTH}" ;; *) IGCM_debug_Exit "IGCM_ensemble_CastInit ${ensemble_Ens_PERTURB_LENGTH} invalid LENGTH" IGCM_debug_Exit "Choose a value in choose in *Y or *M" IGCM_debug_Verif_Exit ;; esac ################################ if [[ ${#ensemble_Ens_PERTURB_NONPERIODIC[*]} != ${#ensemble_Ens_PERTURB_RESTART_NONPERIODIC[*]} && CastRestartNonPer = "true" ]] ; then IGCM_debug_Exit "IGCM_ensemble_CastInit: NONPERIODIC and RESTART_NONPERIODIC lists have different sizes" IGCM_debug_Verif_Exit fi if [[ ${#ensemble_Ens_PERTURB_NONPERIODIC[*]} > 0 ]] && [[ ${ensemble_Ens_PERTURB_NONPERIODIC[0]} != _0_ ]]; then DateNonPeriodicStart=true # Use LENGTH if no NONPERIODIC_LENGTH given if [[ ${#ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[*]} < ${#ensemble_Ens_PERTURB_NONPERIODIC[*]} || ${ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[0]} = _0_ ]] ; then IGCM_debug_Print 1 "WARNING: LENGTH_NONPERIODIC is not fill (or not correctly). Use LENGTH value '${ensemble_Ens_PERTURB_LENGTH}' for all NONPERIODIC runs" echo "WARNING: LENGTH_NONPERIODIC is not fill (or not correctly). Use LENGTH value '${ensemble_Ens_PERTURB_LENGTH}' for all NONPERIODIC runs" DateNum=0 while [ ${DateNum} -lt ${#ensemble_Ens_PERTURB_NONPERIODIC[*]} ] ; do ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[${DateNum}]=${ensemble_Ens_PERTURB_LENGTH} (( DateNum = DateNum + 1 )) done fi # Check lengths DateNum=0 while [ ${DateNum} -lt ${#ensemble_Ens_PERTURB_NONPERIODIC[*]} ] ; do # - Check LENGTH_NONPERIODIC case ${ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[${DateNum}]} in _0_) IGCM_debug_Print 1 "non-periodic start not active" CastNonPeriodicStart=false break ;; *[Yy]|*[Mm]) IGCM_debug_Print 1 "Non-periodic duration : ${ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[${DateNum}]}" CastNonPeriodicStart=true ;; *) IGCM_debug_Exit "IGCM_ensemble_CastInit ${ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[${DateNum}]} : invalid LENGTH" IGCM_debug_Exit "choose in *Y or *M" IGCM_debug_Verif_Exit ;; esac (( DateNum = DateNum + 1 )) # - Check RESTART_NONPERIODIC if [[ DateNonPeriodicStart ]]; then case ${ensemble_Ens_PERTURB_RESTART_NONPERIODIC[${DateNum}]} in _0_) IGCM_debug_Exit "IGCM_ensemble_CastInit ${ensemble_Ens_PERTURB_RESTART_NONPERIODIC[${DateNum}]} : invalid NON PERIODIC RESTART" IGCM_debug_Verif_Exit ;; esac fi done # Use INITFROM if no INITFROM_NONPERIODIC given if [ ${#ensemble_Ens_PERTURB_INITFROM_NONPERIODIC[*]} -lt ${#ensemble_Ens_PERTURB_NONPERIODIC[*]} ] ; then IGCM_debug_Print 1 "WARNING: INITFROM_NONPERIODIC is not fill (or not correctly). Use INITFROM value '${ensemble_Ens_PERTURB_INITFROM}' for all NONPERIODIC runs" DateNum=0 while [ ${DateNum} -lt ${#ensemble_Ens_PERTURB_NONPERIODIC[*]} ] ; do ensemble_Ens_PERTURB_INITFROM_NONPERIODIC[${DateNum}]=${ensemble_Ens_PERTURB_INITFROM} (( DateNum = DateNum + 1 )) done fi # Use INITPATH if no INITPATH_NONPERIODIC given if [ ${#ensemble_Ens_PERTURB_INITPATH_NONPERIODIC[*]} -lt ${#ensemble_Ens_PERTURB_NONPERIODIC[*]} ] ; then IGCM_debug_Print 1 "WARNING: INITPATH_NONPERIODIC is not fill (or not correctly). Use INITPATH value '${ensemble_Ens_PERTURB_INITPATH}' for all NONPERIODIC runs" DateNum=0 while [ ${DateNum} -lt ${#ensemble_Ens_PERTURB_NONPERIODIC[*]} ] ; do ensemble_Ens_PERTURB_INITPATH_NONPERIODIC[${DateNum}]=${ensemble_Ens_PERTURB_INITPATH} (( DateNum = DateNum + 1 )) done fi else IGCM_debug_Print 1 "Non-Periodic start NOT ACTIVE" DateNonPeriodicStart=false fi ################################ # A few checks for the Non-Periodic case: # A few checks for the PERTU_MAP_LIST case: case ${ensemble_Ens_PERTURB_PERTU_MAP_LIST[0]} in _0_) IGCM_debug_Print 1 "list of perturbation maps not active" CastMemberList=false ;; *) if [ ${CastPeriodicStart} = "true" ] ; then IGCM_debug_Exit "list of perturbation maps for periodic start not implemented, will stop execution" IGCM_debug_Verif_Exit elif [ ${CastNonPeriodicStart} = "true" ] ; then IGCM_debug_Exit "list of perturbation maps for non periodic start not implemented, will stop execution" IGCM_debug_Verif_Exit fi # test that MEMBER_NAMESLIST and PERTU_MAP_LIST have the same size if [ ${#ensemble_Ens_PERTURB_PERTU_MAP_LIST[*]} -ne ${#ensemble_Ens_PERTURB_MEMBER_NAMESLIST[*]} ] ; then IGCM_debug_Exit "number of elements in PERTU_MAP_LIST and MEMBER_NAMESLIST differ" IGCM_debug_Verif_Exit fi IGCM_debug_Print 1 "list of perturbation maps : ${ensemble_Ens_PERTURB_PERTU_MAP_LIST[*]}" IGCM_debug_Print 1 "list of members names : ${ensemble_Ens_PERTURB_MEMBER_NAMESLIST[*]}" CastMemberList=true ;; esac # IGCM_debug_Exit "fin du test PERTU_MAP_LIST" # IGCM_debug_Verif_Exit # Need to know all the restart filename of the component we will apply the noise to IGCM_card_DefineArrayFromOption config.card ListOfComponents ${PerturbComp} eval compname=\${config_ListOfComponents_${PerturbComp}[0]} > /dev/null 2>&1 # Target the component's card we apply the noise to card=${SUBMIT_DIR}/COMP/${compname}.card # Read the restart file list. To be used later IGCM_card_DefineArrayFromOption ${card} RestartFiles List ListFilesName=${compname}_RestartFiles_List eval FileName0=\${${ListFilesName}[0]} > /dev/null 2>&1 eval NbFiles=\${#${ListFilesName}[@]} > /dev/null 2>&1 # Check IGCM_debug_Print 1 "Nb Restart Files = ${NbFiles}" IGCM_debug_PopStack "IGCM_ensemble_CastInit" } function IGCM_ensemble_CastPeriodicStarts { IGCM_debug_PushStack "IGCM_ensemble_CastPeriodicStarts" [ ${CastPeriodicStart} = false ] && return echo IGCM_debug_Print 1 "Manage periodic starts" #.. Manage periodic starts .. # ====================== # ... Loop over DateBegin ... eval DateBegin=\${ensemble_Ens_PERTURB_BEGIN_INIT} while [ ${DateBegin} -le ${ensemble_Ens_PERTURB_END_INIT} ] ; do IGCM_date_GetYearMonth ${DateBegin} year month # - Determine number of day(s) in PERIODICITY PeriodLengthInDays=$( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${ensemble_Ens_PERTURB_PERIODICITY} ) # - Determine number of day(s) in LENGTH DureeLengthInDays=$(( $( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${ensemble_Ens_PERTURB_LENGTH} ) - 1 )) # - Determine DateEnd (( DateEnd = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${DureeLengthInDays} ) )) # - Build directory name IGCM_ensemble_CastDirectoryName ${ensemble_Ens_PERTURB_NAME} ${ensemble_Ens_PERTURB_PERIODICITY} $year $month $StartDir # - Determine RestartDate (( Offset = -1 )) (( RestartDate = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${Offset} ) )) IGCM_debug_Print 2 "${DateBegin} => ${DateEnd} : ${StartDir}" echo "${DateBegin} ${DateEnd} ${StartDir}" >> ${RUN_DIR}/CreatedDir.txt # - Create directory for current DateBegin if [ ! -d ${StartDir} ] ; then IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir} IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir} ln -s ../../.resol . ln -s ../../.libmpi . IGCM_sys_Cd ${RUN_DIR} fi # - Create directory to store modified restart files RestartDir=${STORAGE}/IGCM_IN/${config_UserChoices_TagName}/${StartDir} IGCM_sys_MkdirArchive ${RestartDir} # - Loop over members i=0 while [ $i -lt ${ensemble_Ens_PERTURB_MEMBER} ] ; do MemberDir="${StartDir}${Alpha[$i]}" echo IGCM_debug_Print 3 "${MemberDir}" JobName="Job_${MemberDir}" # * Create directory if it doesn't exist and copy/link files if [ ! -d ${SUBMIT_DIR}/${StartDir}/${MemberDir} ] ; then IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir}/${MemberDir} IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir}/${MemberDir} ln -s ../../COMP ln -s ../../PARAM ln -s ../../POST ln -s ../../DRIVER IGCM_sys_Cd ${RUN_DIR} IGCM_sys_Cp config.card run.card.init ${SUBMIT_DIR}/${StartDir}/${MemberDir} IGCM_sys_Cp Job_${config_UserChoices_JobName} ${SUBMIT_DIR}/${StartDir}/${MemberDir}/${JobName} # Dump command to be lauched echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qsub.${StartDir}.sh echo "${SUBMIT} ${JobName} ; cd -" >> ${RUN_DIR}/Qsub.${StartDir}.sh echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh echo "${libIGCM}/clean_month.job ; cd -" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh echo "${libIGCM}/clean_year.job ; cd -" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh # * Update files : config.card, Job_, COMP/comp.card IGCM_ensemble_CastFilesUpdate ${DateBegin} ${DateEnd} ${RestartDate} # * Apply noise on restart file IGCM_ensemble_CastPerturbFile fi (( i = i + 1 )) done # Done. Save ${StartDir} submission text file IGCM_sys_Cp ${RUN_DIR}/Qsub.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.month.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.year.${StartDir}.sh ${SUBMIT_DIR} # - Next DateBegin echo "$DateBegin $PeriodLengthInDays" case ${ensemble_Ens_PERTURB_PERIODICITY} in *[Yy]|*[Mm]) (( DateBegin = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${PeriodLengthInDays} ) )) ;; esac echo "New DateBegin = $DateBegin" echo "========================================================================" done IGCM_debug_PopStack "IGCM_ensemble_CastPeriodicStarts" } function IGCM_ensemble_CastNonPeriodicStarts { IGCM_debug_PushStack "IGCM_ensemble_CastNonPeriodicStarts" #.. Manage non periodic starts => Loop over DateBegin .. # ========================== [ ${CastNonPeriodicStart} = false ] && return echo IGCM_debug_Print 1 "Manage non periodic starts" DateNum=0 # ... Loop over ensemble_Ens_PERTURB_NONPERIODIC ... echo ">${DateNum}<" echo ">${#ensemble_Ens_PERTURB_NONPERIODIC[*]}<" while [ ${DateNum} -lt ${#ensemble_Ens_PERTURB_NONPERIODIC[*]} ] ; do DateBegin=${ensemble_Ens_PERTURB_NONPERIODIC[${DateNum}]} Duree=${ensemble_Ens_PERTURB_LENGTH_NONPERIODIC[${DateNum}]} echo ">${DateBegin}<" echo ">${Duree}<" # - Determine number of day(s) in LENGTH_NONPERIODIC IGCM_date_GetYearMonth ${DateBegin} year month DureeLengthInDays=$(( $( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${Duree} ) - 1 )) # - Build directory name echo "========================================================================" echo "ensemble_Ens_PERTURB_NAME = ${ensemble_Ens_PERTURB_NAME}" IGCM_ensemble_CastDirectoryName ${ensemble_Ens_PERTURB_NAME} ${Duree} $year $month $StartDir # - Determine DateEnd (( DateEnd = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${DureeLengthInDays} ) )) echo ">${DateEnd}<" echo "tout va bien 1" # - Determine RestartDate if [[ ${CastRestartNonPer} == "true" ]]; then RestartDate=${ensemble_Ens_PERTURB_RESTART_NONPERIODIC[${DateNum}]} else (( Offset = -1 )) (( RestartDate = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${Offset} ) )) fi IGCM_debug_Print 2 "${DateBegin} => ${DateEnd} : ${StartDir}" # - Does $StartDir already exist ? #echo "tout va bien 2" ${StartDir} if [ ! -d ${SUBMIT_DIR}/${StartDir} ] ; then echo "create dir" IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir} IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir} ln -s ../../.resol . ln -s ../../.libmpi . IGCM_sys_Cd ${RUN_DIR} echo "${DateBegin} ${DateEnd} ${StartDir}" >> ${RUN_DIR}/CreatedDir.txt fi PeriodDateEnd=$( grep -m1 ${StartDir} ${RUN_DIR}/CreatedDir.txt | cut -f2 -d\ ) # - Create directory in which to store new restart files if it does'nt already exist RestartDir=${STORAGE}/IGCM_IN/${config_UserChoices_TagName}/${StartDir} IGCM_sys_MkdirArchive ${RestartDir} # - Loop over members i=0 while [ $i -lt ${ensemble_Ens_PERTURB_MEMBER} ] ; do MemberDir="${StartDir}${Alpha[$i]}" IGCM_debug_Print 3 "${MemberDir}" JobName="Job_${MemberDir}" # * Create directory if it doesn't exist and copy files if [ ! -d ${SUBMIT_DIR}/${StartDir}/${MemberDir} ] ; then IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir}/${MemberDir} #IGCM_sys_Cp -r COMP/ PARAM/ ${StartDir}/${MemberDir} IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir}/${MemberDir} ln -s ../../COMP ln -s ../../PARAM ln -s ../../POST ln -s ../../DRIVER IGCM_sys_Cd ${RUN_DIR} IGCM_sys_Cp config.card run.card.init ${SUBMIT_DIR}/${StartDir}/${MemberDir} IGCM_sys_Cp Job_${config_UserChoices_JobName} ${SUBMIT_DIR}/${StartDir}/${MemberDir}/Job_${MemberDir} # Dump command to be lauched echo "cd ${StartDir}/${MemberDir}/ ;" >> Qsub.${StartDir}.sh echo "${SUBMIT} ${JobName} ; cd -" >> Qsub.${StartDir}.sh echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh echo "${libIGCM}/clean_month.job ; cd -" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh echo "${libIGCM}/clean_year.job ; cd -" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh # * Update files : config.card, Job_, COMP/comp.card echo "${PeriodDateEnd} ? ${DateEnd}" if [ ${PeriodDateEnd} -gt ${DateEnd} ] ; then DateEnd=${PeriodDateEnd} fi IGCM_ensemble_CastFilesUpdate ${DateBegin} ${DateEnd} ${RestartDate} # * Apply noise on restart file IGCM_ensemble_CastPerturbFile fi (( i = i + 1 )) done # Done. Save ${StartDir} submission text file IGCM_sys_Cp ${RUN_DIR}/Qsub.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.month.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.year.${StartDir}.sh ${SUBMIT_DIR} (( DateNum = DateNum + 1 )) done IGCM_debug_PopStack "IGCM_ensemble_CastNonPeriodicStarts" } function IGCM_ensemble_CastMemberList { IGCM_debug_PushStack "IGCM_ensemble_CastMemberList" if [ ${CastMemberList} = false ] ; then IGCM_debug_PopStack "IGCM_ensemble_CastMemberList" return fi echo IGCM_debug_Print 1 "Manage members list" #.. Manage members list .. # ====================== # DateBegin eval DateBegin=\${ensemble_Ens_PERTURB_BEGIN_INIT} IGCM_date_GetYearMonth ${DateBegin} year month # - Determine number of day(s) in LENGTH DureeLengthInDays=$(( $( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${ensemble_Ens_PERTURB_LENGTH} ) - 1 )) # - Determine DateEnd DateEnd=$( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${DureeLengthInDays} ) # bad hack enforce yearly for parent directory name # - Build directory name IGCM_ensemble_CastDirectoryName ${ensemble_Ens_PERTURB_NAME} 1Y $year $month $StartDir # - Determine RestartDate (( Offset = -1 )) RestartDate=$( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${Offset} ) IGCM_debug_Print 2 "${DateBegin} => ${DateEnd} : ${StartDir}" echo "${DateBegin} ${DateEnd} ${StartDir}" >> ${RUN_DIR}/CreatedDir.txt # - Create directory for current DateBegin if [ ! -d ${StartDir} ] ; then IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir} IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir} ln -s ../../.resol . ln -s ../../.libmpi . IGCM_sys_Cd ${RUN_DIR} fi # - Create directory to store modified restart files RestartDir=${STORAGE}/IGCM_IN/${config_UserChoices_TagName}/${StartDir} IGCM_sys_MkdirArchive ${RestartDir} # - Loop over members i=0 nbmember=${#ensemble_Ens_PERTURB_PERTU_MAP_LIST[*]} while [ $i -lt $nbmember ] ; do MemberDir=${ensemble_Ens_PERTURB_MEMBER_NAMESLIST[${i}]} MemberVec=${ensemble_Ens_PERTURB_PERTU_MAP_LIST[${i}]} JobName="Job_${MemberDir}" echo IGCM_debug_Print 3 "${MemberDir}" # * Create directory if it doesn't exist and copy/link files if [ ! -d ${SUBMIT_DIR}/${StartDir}/${MemberDir} ] ; then IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir}/${MemberDir} IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir}/${MemberDir} ln -s ../../COMP ln -s ../../PARAM ln -s ../../POST ln -s ../../DRIVER IGCM_sys_Cd ${RUN_DIR} IGCM_sys_Cp config.card run.card.init ${SUBMIT_DIR}/${StartDir}/${MemberDir} IGCM_sys_Cp Job_${config_UserChoices_JobName} ${SUBMIT_DIR}/${StartDir}/${MemberDir}/${JobName} # Dump command to be lauched echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qsub.${StartDir}.sh echo "${SUBMIT} ${JobName} ; cd -" >> ${RUN_DIR}/Qsub.${StartDir}.sh echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh echo "${libIGCM}/clean_month.job ; cd -" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh echo "${libIGCM}/clean_year.job ; cd -" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh # * Update files : config.card, Job_, COMP/comp.card IGCM_ensemble_CastFilesUpdate ${DateBegin} ${DateEnd} ${RestartDate} # * Apply noise on restart file IGCM_ensemble_CastPerturbFile fi (( i = i + 1 )) done # Done. Save ${StartDir} submission text file IGCM_sys_Cp ${RUN_DIR}/Qsub.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.month.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.year.${StartDir}.sh ${SUBMIT_DIR} IGCM_debug_PopStack "IGCM_ensemble_CastMemberList" } function IGCM_ensemble_CastFilesUpdate { IGCM_debug_PushStack "IGCM_ensemble_CastFilesUpdate" # Debug Print : echo IGCM_debug_Print 1 "IGCM_ensemble_CastFilesUpdate :" HumanDateBegin=$( IGCM_date_ConvertFormatToHuman ${1} ) HumanDateEnd=$( IGCM_date_ConvertFormatToHuman ${2} ) HumanRestartDate=$( IGCM_date_ConvertFormatToHuman ${3} ) # ==> config.card IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleRun 'y' IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleName ${ensemble_Ens_PERTURB_NAME} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleDate ${StartDir} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleType "Ens_PERTURB" IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices JobName ${MemberDir} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices DateBegin ${HumanDateBegin} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices DateEnd ${HumanDateEnd} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Restarts OverRule "n" for comp in ${config_ListOfComponents[*]} ; do IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${comp} Restart "y" IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${comp} RestartDate ${HumanRestartDate} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${comp} RestartJobName ${ensemble_Ens_PERTURB_INITFROM} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${comp} RestartPath ${ensemble_Ens_PERTURB_INITPATH} done # ==> Job sed -e "s/\(#.*Script_Output_\)${config_UserChoices_JobName}\(\.*\)/\1${MemberDir}\2/" \ -e "s/\(#.*\)${config_UserChoices_JobName}\(\.*\)/\1${MemberDir} \2/" \ -e "s/^PeriodNb=.*/PeriodNb=60/" \ ${SUBMIT_DIR}/${StartDir}/${MemberDir}/Job_${MemberDir} > Job_${MemberDir}.tmp IGCM_sys_Mv Job_${MemberDir}.tmp ${SUBMIT_DIR}/${StartDir}/${MemberDir}/Job_${MemberDir} IGCM_debug_PopStack "IGCM_ensemble_CastFilesUpdate" } function IGCM_ensemble_CastDirectoryName { IGCM_debug_PushStack "IGCM_ensemble_CastDirectoryName" #.. Debug Print .. echo IGCM_debug_Print 1 "IGCM_ensemble_CastDirectoryName :" echo Name=$1 Duree=$2 year=$3 month=$4 # - Build directory name case ${Duree} in *Y|*y) siecle="$( echo $year | cut -c1-2 )" siecle=$( (( $siecle - 18 )) ) StartYear="${siecle}$( echo $year | cut -c3-4 )" StartDir="${Name}${StartYear}" ;; *M|*m) echo $month siecle="$( echo $year | cut -c1-2 )" siecle=$( (( $siecle - 18 )) ) StartYear="${siecle}$( echo $year | cut -c3-4 )" StartMonth="${AlphaMonth[ (( 10#${month} - 1 )) ]}" StartDir="${Name}${StartYear}${StartMonth}" ;; esac IGCM_debug_PopStack "IGCM_ensemble_CastDirectoryName" } function IGCM_ensemble_CastPerturbFile { IGCM_debug_PushStack "IGCM_ensemble_CastPerturbFile" typeset i i_ j typeset -Z4 j4 typeset file_out file_out_ #.. Debug Print .. echo IGCM_debug_Print 1 "IGCM_ensemble_CastPerturbFile :" #.. FileIn ? => RestartDate .. DirIn="${ensemble_Ens_PERTURB_INITPATH}/${ensemble_Ens_PERTURB_INITFROM}/${PerturbComp}/Restart" DirInTar="${ensemble_Ens_PERTURB_INITPATH}/${ensemble_Ens_PERTURB_INITFROM}/RESTART" FileIn="${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${PerturbFile}" DirOut="${RestartDir}/${MemberDir}/${PerturbComp}/Restart" # * Create member restart directory IGCM_sys_TestDirArchive ${DirOut} RET=$? if [ $RET -gt 0 ] ; then IGCM_sys_MkdirArchive ${DirOut} fi FileOut="${MemberDir}_${RestartDate}_${PerturbFile}" IGCM_debug_Print 1 "FileIn = ${DirIn}/${FileIn}" IGCM_debug_Print 1 "FileOut = ${DirOut}/${FileOut}.nc" IGCM_sys_TestFileArchive ${DirOut}/${FileOut}.nc RET=$? if [ $RET -gt 0 ] ; then # * Look for the restart file we apply the noise to # restart file list pertaining to the component we apply the noise to # but not being the precise restart file we will apply the noise to unset OtherFileInList # generic restart filename list (like flxat, sstoc, restart, ...) unset OtherGenericList if ( [ X${FileName0} != X${NULL_STR} ] && [ X${FileName0} != XNONE ] ) ; then (( i=0 )) until [ $i -ge ${NbFiles} ]; do (( i_ = i+1 )) eval file_out_=\${${ListFilesName}[$i_]} > /dev/null 2>&1 eval file_out=${file_out_} generic_restart_file_name_out=$( basename ${file_out} .nc ) if [ ! ${generic_restart_file_name_out} = ${PerturbFile} ] ; then set +A OtherFileInList ${OtherFileInList[*]} ${PerturbComp}_${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic_restart_file_name_out}\*.nc set +A OtherGenericList ${OtherGenericList[*]} ${generic_restart_file_name_out} fi (( i=i+3 )) done fi # How many restart files other than the one we will apply the noise to NbOtherFiles=${#OtherGenericList[*]} ########################## # TO BE A FUNCTION BEGIN # ########################## if [ $( IGCM_sys_TestFileBuffer ${DirIn}/${FileIn}*.nc ; echo $? ) = 0 ] ; then IGCM_debug_Print 3 "Buffered restart" Buffered=true Archived=false Tared=false nb_restart_file=$(IGCM_sys_CountFileBuffer ${DirIn}/${FileIn}_????.nc) elif [ $( IGCM_sys_TestFileArchive ${DirIn}/${FileIn}*.nc ; echo $? ) = 0 ] ; then IGCM_debug_Print 3 "Archived restart" Buffered=false Archived=true Tared=false nb_restart_file=$(IGCM_sys_CountFileArchive ${DirIn}/${FileIn}_????.nc) else IGCM_debug_Print 3 "Tared restart" Buffered=false Archived=false Tared=true # Look for the tar file we want if we did not found it already for PotentialTarFile in $( find ${ensemble_Ens_PERTURB_INITPATH}/${ensemble_Ens_PERTURB_INITFROM}/RESTART -name "${ensemble_Ens_PERTURB_INITFROM}_*restart*.tar" -print ) ; do IsMatching=$( echo ${PotentialTarFile##*/} | sed "s:_restart::" | sed "s:^${ensemble_Ens_PERTURB_INITFROM}_::" | sed "s:\.tar$::" | gawk -F_ -v restartdate=${RestartDate} '{if (($1 <= restartdate) && ($2 >= restartdate)) {print $1"_"$2}}' ) if [ ! X${IsMatching} = X ] ; then TarFileFound=${PotentialTarFile} break fi done # Extract relevant restart files IGCM_debug_Print 1 "tar xvf ${TarFileFound} ${PerturbComp}_${FileIn}*.nc ${OtherFileInList[*]}" tar xvf ${TarFileFound} ${PerturbComp}_${FileIn}*.nc ${OtherFileInList[*]} nb_restart_file=$( IGCM_sys_CountFileBuffer ${PerturbComp}_${FileIn}_????.nc ) fi # Move around and perturb restart files so as to be able to start hindcast/forecast simulation members if [ ${nb_restart_file} -gt 1 ] ; then j=0 until [ $j -ge ${nb_restart_file} ]; do j4=${j} if [ X${Buffered} = Xtrue ] ; then IGCM_sys_GetBuffer ${DirIn}/${FileIn}_${j4}.nc ${RUN_DIR}/${FileOut}_${j4}.nc cd ${DirOut} for generic in ${OtherGenericList[*]} ; do ln -s ${DirIn}/${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${MemberDir}_${RestartDate}_${generic}_${j4}.nc done cd - elif [ X${Archived} = Xtrue ] ; then IGCM_sys_Get ${DirIn}/${FileIn}_${j4}.nc ${RUN_DIR}/${FileOut}_${j4}.nc for generic in ${OtherGenericList[*]} ; do IGCM_sys_RshArchive "cd ${DirOut} ; ln -s ${DirIn}/${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${MemberDir}_${RestartDate}_${generic}_${j4}.nc" done elif [ X${Tared} = Xtrue ] ; then IGCM_debug_Print 2 "IGCM_sys_Mv ${PerturbComp}_${FileIn}_${j4}.nc ${RUN_DIR}/${FileOut}_${j4}.nc" IGCM_sys_Mv ${PerturbComp}_${FileIn}_${j4}.nc ${RUN_DIR}/${FileOut}_${j4}.nc for generic in ${OtherGenericList[*]} ; do IGCM_sys_Mv ${PerturbComp}_${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${DirOut}/${MemberDir}_${RestartDate}_${generic}_${j4}.nc done fi (( j=j+1 )) done else if [ X${Buffered} = Xtrue ] ; then IGCM_sys_GetBuffer ${DirIn}/${FileIn}.nc ${RUN_DIR}/${FileOut}.nc cd ${DirOut} for generic in ${OtherGenericList[*]} ; do ln -s ${DirIn}/${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${MemberDir}_${RestartDate}_${generic}.nc done cd - elif [ X${Archived} = Xtrue ] ; then IGCM_sys_Get ${DirIn}/${FileIn}.nc ${RUN_DIR}/${FileOut}.nc for generic in ${OtherGenericList[*]} ; do IGCM_sys_RshArchive "cd ${DirOut} ; ln -s ${DirIn}/${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${MemberDir}_${RestartDate}_${generic}.nc" done elif [ X${Tared} = Xtrue ] ; then IGCM_debug_Print 2 "IGCM_sys_Mv ${PerturbComp}_${FileIn}.nc ${RUN_DIR}/${FileOut}.nc" IGCM_sys_Mv ${PerturbComp}_${FileIn}.nc ${RUN_DIR}/${FileOut}.nc for generic in ${OtherGenericList[*]} ; do IGCM_debug_Print 2 "IGCM_sys_Mv ${PerturbComp}_${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${DirOut}/${MemberDir}_${RestartDate}_${generic}.nc" IGCM_sys_Mv ${PerturbComp}_${ensemble_Ens_PERTURB_INITFROM}_${RestartDate}_${generic}.nc ${DirOut}/${MemberDir}_${RestartDate}_${generic}.nc done fi fi ######################## # TO BE A FUNCTION END # ######################## # treat the perturbation on different components by looking at the executable name case ${PerturbExe} in (AddNoise) IGCM_sys_Chmod 644 ${RUN_DIR}/${FileOut}.nc IGCM_debug_Print 1 "${PerturbExe} ${RUN_DIR}/${FileOut}.nc ${PerturbVar} ${PerturbAmp}" echo ${PerturbExe} ${RUN_DIR}/${FileOut}.nc ${PerturbVar} ${PerturbAmp} > /dev/null 2>&1 if [ $? -ne 0 ] ; then IGCM_debug_Exit "Error with $( basename ${PerturbExe} )" IGCM_debug_Verif_Exit fi IGCM_sys_Put_Out ${RUN_DIR}/${FileOut}.nc ${DirOut}/ 644 ;; (AddPertu3DOCE) # where to find the pattern we apply to the restart PatternFile=${ensemble_Ens_PERTURB_MEMBER_INITPATH}/${ensemble_Ens_PERTURB_MEMBER_INITFROM}/${MemberVec}.nc # where to find the land mask for the grid MaskFile=${ensemble_Ens_PERTURB_MASKPATH}/${PerturbMask} # if there is multiple restart files rebuild restart file if [ ${nb_restart_file} -gt 1 ] ; then IGCM_debug_Print 1 "rebuild files ${FileOut}_????.nc" IGCM_sys_rebuild ${RUN_DIR}/${FileOut}.nc ${RUN_DIR}/${FileOut}_????.nc fi # there is now a single restart file IGCM_sys_Chmod 644 ${RUN_DIR}/${FileOut}.nc IGCM_debug_Print 1 "${PerturbExe} ${RUN_DIR}/${FileOut}.nc ${PerturbVar} ${PatternFile} ${MaskFile}" echo # add pattern to restart file on variable PerturbVar ${PerturbExe} ${RUN_DIR}/${FileOut}.nc ${PerturbVar} ${PatternFile} ${MaskFile} > /dev/null 2>&1 if [ $? -ne 0 ] ; then IGCM_debug_Exit "Error with $( basename ${PerturbExe} )" IGCM_debug_Verif_Exit fi IGCM_sys_Put_Out ${RUN_DIR}/${FileOut}.nc ${DirOut}/ 644 ;; esac fi #.. Update config.card.. IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${PerturbComp} Restart "y" IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${PerturbComp} RestartDate ${HumanRestartDate} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${PerturbComp} RestartJobName ${MemberDir} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${PerturbComp} RestartPath ${RestartDir}/ IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleType "Ens_PERTURB" IGCM_debug_PopStack "IGCM_ensemble_CastPerturbFile" } ############### Date ENSEMBLE ################# function IGCM_ensemble_DateInit { IGCM_debug_PushStack "IGCM_ensemble_DateInit" IGCM_sys_Mkdir ${RUN_DIR} IGCM_sys_Cp ${SUBMIT_DIR}/config.card ${RUN_DIR} IGCM_sys_Cp ${SUBMIT_DIR}/ensemble.card ${RUN_DIR} IGCM_sys_Cp ${SUBMIT_DIR}/Job_* ${RUN_DIR} IGCM_sys_Cp ${SUBMIT_DIR}/run.card.init ${RUN_DIR} if [ -f ${SUBMIT_DIR}/Qsub.* ]; then IGCM_sys_Cp ${SUBMIT_DIR}/Qsub.* ${RUN_DIR} fi if [ -f ${SUBMIT_DIR}/Qclean.* ]; then IGCM_sys_Cp ${SUBMIT_DIR}/Qclean.* ${RUN_DIR} fi IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE active IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE NAME IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE BEGIN_INIT IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE BEGIN_RESTART IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE END_INIT IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE PERIODICITY IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_DATE NONPERIODIC IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_DATE RESTART_NONPERIODIC IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE LENGTH IGCM_card_DefineArrayFromOption ${F_CFG_ENS} Ens_DATE LENGTH_NONPERIODIC IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE INITFROM IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE INITFROM_NONPERIODIC IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE INITPATH IGCM_card_DefineVariableFromOption ${F_CFG_ENS} Ens_DATE INITPATH_NONPERIODIC IGCM_card_DefineVariableFromOption config.card UserChoices JobName IGCM_card_DefineVariableFromOption config.card UserChoices TagName IGCM_card_DefineVariableFromOption config.card UserChoices CalendarType IGCM_card_DefineArrayFromSection config.card ListOfComponents echo IGCM_debug_Print 1 "[Ens_DATE]" IGCM_debug_Print 1 "ACTIVE = ${ensemble_Ens_DATE_active}" IGCM_debug_Print 1 "NAME = ${ensemble_Ens_DATE_NAME}" IGCM_debug_Print 1 "BEGIN_INIT = ${ensemble_Ens_DATE_BEGIN_INIT}" IGCM_debug_Print 1 "END_INIT = ${ensemble_Ens_DATE_END_INIT}" IGCM_debug_Print 1 "PERIODICITY = ${ensemble_Ens_DATE_PERIODICITY}" IGCM_debug_Print 1 "BEGIN_RESTART = ${ensemble_Ens_DATE_BEGIN_RESTART}" IGCM_debug_Print 1 "NONPERIODIC = ${ensemble_Ens_DATE_NONPERIODIC[*]}" IGCM_debug_Print 1 "RESTART_NONPERIODIC = ${ensemble_Ens_DATE_RESTART_NONPERIODIC[*]}" IGCM_debug_Print 1 "LENGTH = ${ensemble_Ens_DATE_LENGTH}" IGCM_debug_Print 1 "LENGTH_NONPERIODIC = ${ensemble_Ens_DATE_LENGTH_NONPERIODIC[*]}" IGCM_debug_Print 1 "INITFROM = ${ensemble_Ens_DATE_INITFROM}" IGCM_debug_Print 1 "INITFROM_NONPERIODIC = ${ensemble_Ens_DATE_INITFROM_NONPERIODIC[*]}" IGCM_debug_Print 1 "INITPATH = ${ensemble_Ens_DATE_INITPATH}" IGCM_debug_Print 1 "INITPATH_NONPERIODIC = ${ensemble_Ens_DATE_INITPATH_NONPERIODIC[*]}" IGCM_debug_Print 1 "JobName = ${config_UserChoices_JobName}" IGCM_debug_Print 1 "TagName = ${config_UserChoices_TagName}" IGCM_debug_Print 1 "CalendarType = ${config_UserChoices_CalendarType}" IGCM_debug_Print 1 "ListOfComponents = ${config_ListOfComponents[*]}" echo "" ensemble_Ens_DATE_MEMBER=1 # actually use only 1 member IGCM_ensemble_SetAlpha ${ensemble_Ens_DATE_MEMBER} IGCM_debug_Print 1 "Check args..." DatePeriodicStart=false DateNonPeriodicStart=false # ... Check LENGTH ... case ${ensemble_Ens_DATE_LENGTH} in *[Yy]|*[Mm]) IGCM_debug_Print 1 "Default simulation duration : ${ensemble_Ens_DATE_LENGTH}" ;; *) IGCM_debug_Exit "IGCM_ensemble_DateInit ${ensemble_Ens_DATE_LENGTH} invalid LENGTH" IGCM_debug_Exit "Choose a value in choose in *Y or *M" IGCM_debug_Verif_Exit ;; esac # *************************************** # A few checks Period case: # *************************************** # if all Periodic params are not filled: desactivate Periodic mode totalPeriodArgs=4 periodFillArgs=0 if [[ X${ensemble_Ens_DATE_BEGIN_RESTART} != "X" ]]; then (( periodFillArgs = periodFillArgs + 1 )) fi if [[ X${ensemble_Ens_DATE_BEGIN_INIT} != "X" ]]; then (( periodFillArgs = periodFillArgs + 1 )) fi if [[ X${ensemble_Ens_DATE_END_INIT} != "X" ]]; then (( periodFillArgs = periodFillArgs + 1 )) fi if [[ X${ensemble_Ens_DATE_PERIODICITY} != "X" ]]; then (( periodFillArgs = periodFillArgs + 1 )) # ... Check PERIODICITY ... case ${ensemble_Ens_DATE_PERIODICITY} in *[Yy]|*[Mm]) IGCM_debug_Print 1 "Periodic length : ${ensemble_Ens_DATE_PERIODICITY}" ;; *) IGCM_debug_Exit "IGCM_ensemble_DateInit ${ensemble_Ens_DATE_PERIODICITY} : invalid PERIODICITY" IGCM_debug_Exit "Choose a value in *Y or *M" IGCM_debug_Verif_Exit ;; esac fi # if periodicity if [[ ${periodFillArgs} = ${totalPeriodArgs} ]]; then DatePeriodicStart=true else if [[ ${periodFillArgs} = 0 ]]; then IGCM_debug_Print 1 "Periodic start NOT ACTIVE" DatePeriodicStart=false else IGCM_debug_Exit "IGCM_ensemble_DateInit missing arguments for Periodic mode!" IGCM_debug_Exit "Get only ${periodFillArgs} on ${totalPeriodArgs} args. Check ${F_CFG_ENS} file." IGCM_debug_Verif_Exit fi fi # *************************************** # A few checks for the Non-Periodic case: # *************************************** if [[ ${#ensemble_Ens_DATE_NONPERIODIC[*]} != ${#ensemble_Ens_DATE_RESTART_NONPERIODIC[*]} ]] ; then IGCM_debug_Exit "IGCM_ensemble_DateInit: NONPERIODIC and RESTART_NONPERIODIC lists have different sizes" IGCM_debug_Verif_Exit fi if [[ ${#ensemble_Ens_DATE_NONPERIODIC[*]} > 0 ]] && [[ ${ensemble_Ens_DATE_NONPERIODIC[*]} != _0_ ]]; then DateNonPeriodicStart=true # Use LENGTH if no NONPERIODIC_LENGTH given if [[ ${#ensemble_Ens_DATE_LENGTH_NONPERIODIC[*]} < ${#ensemble_Ens_DATE_NONPERIODIC[*]} ]] ; then IGCM_debug_Print 1 "WARNING: LENGTH_NONPERIODIC is not fill (or not correctly). Use LENGTH value '${ensemble_Ens_DATE_LENGTH}' for all NONPERIODIC runs" DateNum=0 while [ ${DateNum} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; do ensemble_Ens_DATE_LENGTH_NONPERIODIC[${DateNum}]=${ensemble_Ens_DATE_LENGTH} (( DateNum = DateNum + 1 )) done fi # Use INITFROM if no INITFROM_NONPERIODIC given if [ ${#ensemble_Ens_DATE_INITFROM_NONPERIODIC[*]} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; then IGCM_debug_Print 1 "WARNING: INITFROM_NONPERIODIC is not fill (or not correctly). Use INITFROM value '${ensemble_Ens_DATE_INITFROM}' for all NONPERIODIC runs" DateNum=0 while [ ${DateNum} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; do ensemble_Ens_DATE_INITFROM_NONPERIODIC[${DateNum}]=${ensemble_Ens_DATE_INITFROM} (( DateNum = DateNum + 1 )) done fi # Use INITPATH if no INITPATH_NONPERIODIC given if [ ${#ensemble_Ens_DATE_INITPATH_NONPERIODIC[*]} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; then IGCM_debug_Print 1 "WARNING: INITPATH_NONPERIODIC is not fill (or not correctly). Use INITPATH value '${ensemble_Ens_DATE_INITPATH}' for all NONPERIODIC runs" DateNum=0 while [ ${DateNum} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; do ensemble_Ens_DATE_INITPATH_NONPERIODIC[${DateNum}]=${ensemble_Ens_DATE_INITPATH} (( DateNum = DateNum + 1 )) done fi else IGCM_debug_Print 1 "Non-Periodic start NOT ACTIVE" DateNonPeriodicStart=false fi if [[ ${DateNonPeriodicStart} = true ]]; then DateNum=0 while [ ${DateNum} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; do # - Check LENGTH_NONPERIODIC case ${ensemble_Ens_DATE_LENGTH_NONPERIODIC[${DateNum}]} in *[Yy]|*[Mm]) IGCM_debug_Print 1 "Non-periodic duration ${DateNum}: ${ensemble_Ens_DATE_LENGTH_NONPERIODIC[${DateNum}]}" ;; *) IGCM_debug_Exit "IGCM_ensemble_DateInit ${ensemble_Ens_DATE_LENGTH_NONPERIODIC[${DateNum}]} : invalid NON PERIODIC LENGTH" IGCM_debug_Exit "choose in *Y or *M" IGCM_debug_Verif_Exit ;; esac # - Check RESTART_NONPERIODIC case ${ensemble_Ens_DATE_RESTART_NONPERIODIC[${DateNum}]} in _0_) IGCM_debug_Exit "IGCM_ensemble_DateInit ${ensemble_Ens_DATE_RESTART_NONPERIODIC[${DateNum}]} : invalid NON PERIODIC RESTART" IGCM_debug_Verif_Exit ;; esac (( DateNum = DateNum + 1 )) done fi # DateNonPeriodicStart = true IGCM_debug_PopStack "IGCM_ensemble_DateInit" } function IGCM_ensemble_DatePeriodicStarts { IGCM_debug_PushStack "IGCM_ensemble_DatePeriodicStarts" [ ${DatePeriodicStart} = false ] && return echo IGCM_debug_Print 1 ">>> MANAGE PERIODIC STARTS <<<" #.. Manage periodic starts .. # ====================== # - Build directory name StartDir="${ensemble_Ens_DATE_NAME}" # - Create directory for current DateBegin if [ ! -d ${StartDir} ] ; then IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir} IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir} ln -s ../../.resol . ln -s ../../.libmpi . IGCM_sys_Cd ${RUN_DIR} fi # ... Loop over DateBegin ... eval DateBegin=\${ensemble_Ens_DATE_BEGIN_INIT} eval RestartDate=\${ensemble_Ens_DATE_BEGIN_RESTART} DateNum=0 while [ ${DateBegin} -le ${ensemble_Ens_DATE_END_INIT} ] ; do IGCM_date_GetYearMonth ${DateBegin} year month echo "========================================================================" echo "New DateBegin = $DateBegin" # - Determine number of day(s) in PERIODICITY PeriodLengthInDays=$( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${ensemble_Ens_DATE_PERIODICITY} ) # - Determine number of day(s) in LENGTH DureeLengthInDays=$(( $( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${ensemble_Ens_DATE_LENGTH} ) - 1 )) # - Determine DateEnd (( DateEnd = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${DureeLengthInDays} ) )) IGCM_debug_Print 2 "${DateBegin} => ${DateEnd} : ${StartDir}" echo "${DateBegin} ${DateEnd} ${StartDir}" >> ${RUN_DIR}/CreatedDir.txt # - Loop over members (default =1 no member) i=0 while [ $i -lt ${ensemble_Ens_DATE_MEMBER} ] ; do MemberDir="${ensemble_Ens_DATE_NAME}${DateNum}${Alpha[$i]}_per" echo IGCM_debug_Print 3 "${MemberDir}" JobName="Job_${MemberDir}" # * Create directory if it doesn't exist and copy/link files if [ ! -d ${SUBMIT_DIR}/${StartDir}/${MemberDir} ] ; then IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir}/${MemberDir} IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir}/${MemberDir} ln -s ../../COMP ln -s ../../PARAM ln -s ../../POST ln -s ../../DRIVER IGCM_sys_Cd ${RUN_DIR} IGCM_sys_Cp config.card run.card.init ${SUBMIT_DIR}/${StartDir}/${MemberDir} IGCM_sys_Cp Job_${config_UserChoices_JobName} ${SUBMIT_DIR}/${StartDir}/${MemberDir}/${JobName} # Dump command to be lauched echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qsub.${StartDir}.sh echo "${SUBMIT} ${JobName} ; cd -" >> ${RUN_DIR}/Qsub.${StartDir}.sh echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh echo "${libIGCM}/clean_month.job ; cd -" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh echo "${libIGCM}/clean_year.job ; cd -" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh # * Update files : config.card, Job_, COMP/comp.card IGCM_ensemble_DateFilesUpdate ${DateBegin} ${DateEnd} ${RestartDate} fi (( i = i + 1 )) done # - Next DateBegin & RestartDate echo "$DateBegin $PeriodLengthInDays" case ${ensemble_Ens_DATE_PERIODICITY} in *[Yy]|*[Mm]) (( DateBegin = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${PeriodLengthInDays} ) )) (( RestartDate = $( IGCM_date_AddDaysToGregorianDate ${RestartDate} ${PeriodLengthInDays} ) )) ;; esac (( DateNum = DateNum + 1 )) # increment number of restart date done # Done. Save ${StartDir} submission text file IGCM_sys_Cp ${RUN_DIR}/Qsub.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.month.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.year.${StartDir}.sh ${SUBMIT_DIR} IGCM_debug_PopStack "IGCM_ensemble_DatePeriodicStarts" } function IGCM_ensemble_DateNonPeriodicStarts { IGCM_debug_PushStack "IGCM_ensemble_DateNonPeriodicStarts" #.. Manage non periodic starts => Loop over DateBegin .. # ========================== [ ${DateNonPeriodicStart} = false ] && return echo IGCM_debug_Print 1 ">>> MANAGE NON PERIODIC STARTS <<<" # - Build directory name echo "" echo "========================================================================" echo "ensemble_Ens_DATE_NAME = ${ensemble_Ens_DATE_NAME}" StartDir="${ensemble_Ens_DATE_NAME}" # - Does $StartDir already exist ? if [ ! -d ${SUBMIT_DIR}/${StartDir} ] ; then IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir} IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir} ln -s ../../.resol . ln -s ../../.libmpi . IGCM_sys_Cd ${RUN_DIR} fi DateNum=0 # ... Loop over ensemble_Ens_DATE_NONPERIODIC ... while [ ${DateNum} -lt ${#ensemble_Ens_DATE_NONPERIODIC[*]} ] ; do DateBegin=${ensemble_Ens_DATE_NONPERIODIC[${DateNum}]} Duree=${ensemble_Ens_DATE_LENGTH_NONPERIODIC[${DateNum}]} RestartDate=${ensemble_Ens_DATE_RESTART_NONPERIODIC[${DateNum}]} InitFrom=${ensemble_Ens_DATE_INITFROM_NONPERIODIC[${DateNum}]} InitPath=${ensemble_Ens_DATE_INITPATH_NONPERIODIC[${DateNum}]} # - Determine number of day(s) in LENGTH_NONPERIODIC IGCM_date_GetYearMonth ${DateBegin} year month DureeLengthInDays=$(( $( IGCM_date_DaysInCurrentPeriod ${DateBegin} ${Duree} ) - 1 )) # - Determine DateEnd (( DateEnd = $( IGCM_date_AddDaysToGregorianDate ${DateBegin} ${DureeLengthInDays} ) )) IGCM_debug_Print 2 "${DateBegin} => ${DateEnd} : ${StartDir}" echo "${DateBegin} ${DateEnd} ${StartDir}" >> ${RUN_DIR}/CreatedDir.txt PeriodDateEnd=$( grep -m1 ${StartDir} ${RUN_DIR}/CreatedDir.txt | cut -f2 -d\ ) # - Loop over members i=0 while [ $i -lt ${ensemble_Ens_DATE_MEMBER} ] ; do MemberDir="${ensemble_Ens_DATE_NAME}${DateNum}${Alpha[$i]}" IGCM_debug_Print 3 "${MemberDir}" JobName="Job_${MemberDir}" # * Create directory if it doesn't exist and copy files if [ ! -d ${SUBMIT_DIR}/${StartDir}/${MemberDir} ] ; then IGCM_sys_Mkdir ${SUBMIT_DIR}/${StartDir}/${MemberDir} IGCM_sys_Cd ${SUBMIT_DIR}/${StartDir}/${MemberDir} ln -s ../../COMP ln -s ../../PARAM ln -s ../../POST ln -s ../../DRIVER IGCM_sys_Cd ${RUN_DIR} IGCM_sys_Cp config.card run.card.init ${SUBMIT_DIR}/${StartDir}/${MemberDir} IGCM_sys_Cp Job_${config_UserChoices_JobName} ${SUBMIT_DIR}/${StartDir}/${MemberDir}/Job_${MemberDir} # Dump command to be lauched echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qsub.${StartDir}.sh echo "${SUBMIT} ${JobName} ; cd -" >> ${RUN_DIR}/Qsub.${StartDir}.sh echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh echo "${libIGCM}/clean_month.job ; cd -" >> ${RUN_DIR}/Qclean.month.${StartDir}.sh echo "cd ${StartDir}/${MemberDir}/ ;" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh echo "${libIGCM}/clean_year.job ; cd -" >> ${RUN_DIR}/Qclean.year.${StartDir}.sh # * Update files : config.card, Job_, COMP/comp.card IGCM_ensemble_DateFilesUpdate ${DateBegin} ${DateEnd} ${RestartDate} ${InitFrom} ${InitPath} fi (( i = i + 1 )) done # Done. Save ${StartDir} submission text file IGCM_sys_Cp ${RUN_DIR}/Qsub.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.month.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.year.${StartDir}.sh ${SUBMIT_DIR} (( DateNum = DateNum + 1 )) done # Done. Save ${StartDir} submission text file IGCM_sys_Cp ${RUN_DIR}/Qsub.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.month.${StartDir}.sh ${SUBMIT_DIR} IGCM_sys_Cp ${RUN_DIR}/Qclean.year.${StartDir}.sh ${SUBMIT_DIR} IGCM_debug_PopStack "IGCM_ensemble_DateNonPeriodicStarts" } function IGCM_ensemble_DateFilesUpdate { IGCM_debug_PushStack "IGCM_ensemble_DateFilesUpdate" # Debug Print : echo IGCM_debug_Print 1 "IGCM_ensemble_DateFilesUpdate :" HumanDateBegin=$( IGCM_date_ConvertFormatToHuman ${1} ) HumanDateEnd=$( IGCM_date_ConvertFormatToHuman ${2} ) HumanRestartDate=$( IGCM_date_ConvertFormatToHuman ${3} ) if [[ X${4} != "X" ]]; then initFrom=${4} # non periodic config (INITFROM could be different between members) else initFrom=${ensemble_Ens_DATE_INITFROM} # periodic (same INITFROM value) fi if [[ X${5} != "X" ]]; then initPath=${5} # non periodic config (INITPATH could be different between members) else initPath=${ensemble_Ens_DATE_INITPATH} # periodic (same INITPATH value) fi # ==> config.card # [ENSEMBLE] IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleRun 'y' IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleName ${ensemble_Ens_DATE_NAME} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleDate ${HumanDateBegin} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Ensemble EnsembleType "Ens_DATE" # [UserChoices] IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices JobName ${MemberDir} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices DateBegin ${HumanDateBegin} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card UserChoices DateEnd ${HumanDateEnd} # [Restarts] IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Restarts OverRule "y" IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Restarts RestartDate ${HumanRestartDate} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Restarts RestartJobName ${initFrom} IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card Restarts RestartPath ${initPath} # [ATM/OCE/...] for comp in ${config_ListOfComponents[*]} ; do IGCM_card_WriteOption ${SUBMIT_DIR}/${StartDir}/${MemberDir}/config.card ${comp} Restart "n" done unset initFrom # ==> Job sed -e "s/\(#.*Script_Output_\)${config_UserChoices_JobName}\(\.*\)/\1${MemberDir}\2/" \ -e "s/\(#.*\)${config_UserChoices_JobName}\(\.*\)/\1${MemberDir} \2/" \ -e "s/^PeriodNb=.*/PeriodNb=60/" \ ${SUBMIT_DIR}/${StartDir}/${MemberDir}/Job_${MemberDir} > Job_${MemberDir}.tmp IGCM_sys_Mv Job_${MemberDir}.tmp ${SUBMIT_DIR}/${StartDir}/${MemberDir}/Job_${MemberDir} IGCM_debug_PopStack "IGCM_ensemble_DateFilesUpdate" } ############### Parametric ENSEMBLE #################