[913] | 1 | #!/bin/ksh |
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[2] | 2 | |
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| 3 | #************************************************************** |
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| 4 | # Author: Patrick Brockmann, Martial Mancip |
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[373] | 5 | # Contact: Patrick.Brockmann__at__cea.fr Martial.Mancip__at__ipsl.jussieu.fr |
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| 6 | # $Revision:: $ Revision of last commit |
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| 7 | # $Author:: $ Author of last commit |
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| 8 | # $Date:: $ Date of last commit |
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[2] | 9 | # IPSL (2006) |
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| 10 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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| 11 | # |
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| 12 | #************************************************************** |
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| 13 | |
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| 14 | #================================================== |
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| 15 | # The documentation of this file can be automatically generated |
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[913] | 16 | # if you use the prefix #D- for comments to be extracted. |
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[2] | 17 | # Extract with command: cat lib* | grep "^#D-" | cut -c "4-" |
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| 18 | #================================================== |
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| 19 | |
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| 20 | #================================================== |
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| 21 | # Add high level verbosity |
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| 22 | typeset -i Verbosity=${Verbosity:=3} |
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| 23 | |
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| 24 | #================================================== |
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| 25 | # DEBUG_debug |
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| 26 | # Add low level verbosity |
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[1083] | 27 | DEBUG_debug=${DEBUG_debug:=false} |
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[2] | 28 | |
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[872] | 29 | #================================================== |
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| 30 | # GENERATE RANDOM ERROR ; only apply if ( ${DEBUG_debug} ) |
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[1244] | 31 | typeset -r RandomError=false |
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[872] | 32 | |
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[2] | 33 | #================================================== |
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| 34 | # NULL_STR |
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| 35 | # Default null string |
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[913] | 36 | typeset -r NULL_STR="_0_" |
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[2] | 37 | |
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| 38 | #================================================== |
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| 39 | # libIGCM_CurrentTag |
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| 40 | # Current libIGCM tag, check compatibilty with *.card |
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[1244] | 41 | typeset -r libIGCMVersion="2.7" |
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[2] | 42 | |
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| 43 | #================================================== |
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| 44 | # Exit Flag (internal debug) |
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| 45 | # When true, end the master loop AFTER SAVES FILES |
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| 46 | ExitFlag=false |
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| 47 | |
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| 48 | #================================================== |
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[1243] | 49 | # When we start to run the simulation is not finished |
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| 50 | simulationIsOver=false |
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| 51 | |
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| 52 | #================================================== |
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[1268] | 53 | # When we start to run we dont flush AMQP messages |
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| 54 | FlushAMQP=false |
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| 55 | |
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| 56 | #================================================== |
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[2] | 57 | # Declare a stack of functions calls |
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[59] | 58 | unset IGCM_debug_Stack |
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| 59 | unset IGCM_debug_StackArgs |
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[913] | 60 | unset IGCM_debug_StackTiming |
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[54] | 61 | IGCM_debug_Stack[0]=${NULL_STR} |
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| 62 | IGCM_debug_StackArgs[0]=${NULL_STR} |
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[913] | 63 | IGCM_debug_StackTiming[0]=${NULL_STR} |
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[2] | 64 | IGCM_debug_LenStack=0 |
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| 65 | |
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| 66 | #D-#================================================================== |
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[913] | 67 | #D-function IGCM_debug_getDate_ms |
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| 68 | #D- * Purpose: Give number of milliseconds since 01-jan-1970 |
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| 69 | function IGCM_debug_getDate_ms |
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| 70 | { |
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[926] | 71 | typeset nanosecs ms |
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[913] | 72 | # nano secondes since 01-jan-1970 |
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| 73 | nanosecs=$( date +%s%N ) |
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| 74 | |
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| 75 | # truncate the last 6 digits to get milliseconds since 01-jan-1970 |
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| 76 | ms=${nanosecs:0:${#nanosecs}-6} |
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| 77 | |
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| 78 | echo "$ms" |
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| 79 | } |
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| 80 | |
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| 81 | #D-#================================================================== |
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| 82 | #D-function IGCM_debug_sizeOfTabContent |
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| 83 | #D- * Purpose: Give sumed size of a list of files |
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[924] | 84 | #D- * Usage: IGCM_debug_sizeOfTabContent entityList destination |
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| 85 | #D- * where entityList is a list of files or directory |
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| 86 | #D- * where dest is either a directory or a file name |
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[913] | 87 | function IGCM_debug_sizeOfTabContent |
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| 88 | { |
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[924] | 89 | typeset entityListe destination iEntity sizeKo sumSizeKo sumSizeMo |
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| 90 | |
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| 91 | eval set +A entityListe \${${1}} |
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[941] | 92 | destination=${2} |
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[924] | 93 | sumSizeKo=0 |
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| 94 | |
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| 95 | # Here we will try to compute size (file or directory size) from local path and not from archive. |
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[941] | 96 | for ((i = 0; i < ${#entityListe[*]}; i += 1)) ; do |
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| 97 | if [ -f ${entityListe[$i]} ] ; then |
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| 98 | # One file or a bunch of files has been copied without renaming from a visible filesystem |
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| 99 | iEntity=${entityListe[$i]} |
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| 100 | elif [ -f ${entityListe[$i]##/*/} ] ; then |
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| 101 | # One file or a bunch of files has been copied without renaming from an non visible filesystem |
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[924] | 102 | # remove path /home/login/../ from entityListe elements |
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| 103 | iEntity=${entityListe[$i]##/*/} |
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| 104 | elif [ -f ${destination} ] ; then |
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[941] | 105 | # a file has been copied and renamed |
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[924] | 106 | iEntity=${destination} |
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| 107 | elif [ -f ${destination}/${entityListe[$i]##/*/} ] ; then |
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| 108 | # a copy in a directory but not in ${PWD} |
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| 109 | iEntity=${destination}/${entityListe[$i]##/*/} |
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| 110 | elif [ -d ${entityListe[$i]} ] ; then |
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[941] | 111 | # a directory has been copied from a non remote place |
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[924] | 112 | iEntity=${entityListe[$i]} |
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| 113 | elif [ -d ${destination}/${entityListe[$i]##/*/} ] ; then |
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[941] | 114 | # a directory has been copied from a remote archive and not renamed |
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[924] | 115 | iEntity=${destination}/${entityListe[$i]##/*/} |
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| 116 | elif [ -d ${destination} ] ; then |
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[941] | 117 | # a directory has been copied from a remote archive and renamed |
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[924] | 118 | iEntity=${destination} |
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[917] | 119 | fi |
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[1083] | 120 | sizeKo=$( du --apparent-size -skL ${iEntity} | gawk '{print $1}' ) |
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[924] | 121 | sumSizeKo=$(( $sumSizeKo + $sizeKo )) |
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[913] | 122 | done |
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[924] | 123 | sumSizeMo=$( echo "scale=6;${sumSizeKo}/1024" | bc ) |
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| 124 | echo "${sumSizeKo}|${sumSizeMo}" |
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[913] | 125 | } |
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| 126 | |
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| 127 | #D-#================================================================== |
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[983] | 128 | #D-function IGCM_debug_send_AMQP_msg__MAILTUNNEL |
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| 129 | #D- * Purpose: Take over AMQP C client using mail as a message recipient |
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| 130 | #D- * One argument : base64 encoded message |
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[1051] | 131 | #D- * Attach encoded config.card when starting the simulation |
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| 132 | |
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[983] | 133 | function IGCM_debug_send_AMQP_msg__MAILTUNNEL { |
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| 134 | |
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[987] | 135 | typeset b64_encoded_msg mail_recipient |
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[1076] | 136 | typeset buffer send_messages mail_frequency |
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[987] | 137 | typeset last_mail_date__file |
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[1234] | 138 | typeset secondsBetweenRefAndLastMail secondsSinceLastMail |
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[987] | 139 | |
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[983] | 140 | b64_encoded_msg=$1 |
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| 141 | |
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[1072] | 142 | mail_recipient="superviseur@ipsl.jussieu.fr" |
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[983] | 143 | send_messages=0 |
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| 144 | mail_frequency=3600 # in seconds |
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| 145 | # use to keep track when was last mail sent (maybe to be replaced with global variable) |
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[1150] | 146 | last_mail_date__file=${R_BUF}/.stamp.${config_UserChoices_TagName}.${config_UserChoices_JobName} |
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| 147 | # use to accumulate messages before sending them |
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| 148 | buffer=${R_BUF}/.buffer.${config_UserChoices_TagName}.${config_UserChoices_JobName} |
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[983] | 149 | |
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| 150 | # init |
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| 151 | if [ ! -f "${buffer}" ]; then |
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[1150] | 152 | touch ${buffer} |
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[983] | 153 | fi |
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| 154 | |
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| 155 | if [ ! -f "${last_mail_date__file}" ]; then |
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[1150] | 156 | touch ${last_mail_date__file} |
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[983] | 157 | else |
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[1150] | 158 | # compute last time the file was changed (in seconds) |
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[1234] | 159 | secondsBetweenRefAndLastMail=$(stat -c %Y ${last_mail_date__file}) |
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| 160 | status=$? |
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| 161 | # |
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[1275] | 162 | # Only execute this block when the stat command succeeded. |
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| 163 | # The stat command might fail in some circumstance but we consider it is ok to continue anyway. |
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| 164 | if [ ${status} -eq 0 ] ; then |
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| 165 | secondsSinceLastMail=$(( $(date +%s) - ${secondsBetweenRefAndLastMail} )) |
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| 166 | # send message when exceeding threshold |
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| 167 | [ ${secondsSinceLastMail} -gt ${mail_frequency} ] && send_messages=1 |
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[1234] | 168 | fi |
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[983] | 169 | fi |
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| 170 | |
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[997] | 171 | # queue messages in the buffer |
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| 172 | echo ${b64_encoded_msg} >> ${buffer} |
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| 173 | |
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| 174 | # send mail |
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[1051] | 175 | |
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[1053] | 176 | if [ X${initBigBro} = Xtrue ] ; then |
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[1087] | 177 | #echo $(date +"%Y-%m-%dT%H:%M:%S.%N%z") > ${SUBMIT_DIR}/mail.txt |
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[1051] | 178 | mailx -s "[TEMPORARY AMQP CHANNEL]" -a ${SUBMIT_DIR}/config.card.base64 ${mail_recipient} < ${buffer} # send buffer |
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| 179 | rm -f $buffer ; touch ${buffer} # clear buffer |
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| 180 | touch ${last_mail_date__file} # memorize last mail date |
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| 181 | initBigBro=false |
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[1150] | 182 | elif [ ${send_messages} -eq 1 ] ; then |
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[1087] | 183 | #echo $(date +"%Y-%m-%dT%H:%M:%S.%N%z") >> ${SUBMIT_DIR}/mail.txt |
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[1051] | 184 | mailx -s "[TEMPORARY AMQP CHANNEL]" ${mail_recipient} < ${buffer} # send buffer |
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[1150] | 185 | rm -f ${buffer} ; touch ${buffer} # flush the buffer |
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[1051] | 186 | touch ${last_mail_date__file} # memorize last mail date |
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[983] | 187 | fi |
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[987] | 188 | |
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[1189] | 189 | if ( ${FlushAMQP} ) ; then |
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[1150] | 190 | mailx -s "[TEMPORARY AMQP CHANNEL]" ${mail_recipient} < ${buffer} # send buffer |
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| 191 | rm -f ${buffer} # cleaning behind us |
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| 192 | rm -f ${last_mail_date__file} # cleaning behind us |
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| 193 | fi |
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| 194 | |
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[983] | 195 | # Allways all good for now. |
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| 196 | return 0 |
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| 197 | } |
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| 198 | |
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| 199 | #D-#================================================================== |
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[1162] | 200 | #D-function IGCM_debug_sendAMQP_Metrics |
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| 201 | #D- * Purpose: Take over AMQP C client using mail as a message recipient |
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[1202] | 202 | #D- * Two arguments : - Directory where metrics.json files can be found |
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| 203 | #D- * - Metrics Group Name. metrics will be added to this group |
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[1162] | 204 | #D- * Attach encoded metrics.json files. |
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| 205 | |
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| 206 | function IGCM_debug_sendAMQP_Metrics { |
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| 207 | |
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| 208 | typeset mail_recipient encodedBody |
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| 209 | if [ X${ActivateBigBro} = Xtrue ] ; then |
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| 210 | mail_recipient="superviseur@ipsl.jussieu.fr" |
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| 211 | # Metrics tag on server side |
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| 212 | code=7100 |
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| 213 | # Usual AMQP message to route messages on server side |
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[1202] | 214 | encodedBody=$( echo "{${genericSimulationID},\"msgCode\":\"${code}\",\"msgUID\":\"$(uuidgen)\",\"metricsGroupName\":\"${2}\",\"msgTimestamp\":\"$( date +"%Y-%m-%dT%H:%M:%S.%N%z" )\"}" | base64 -w 0 ) |
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[1162] | 215 | # send mail |
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| 216 | attachmentsOptions="" |
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| 217 | for metricsFile in $( ls $1/*json ) ; do |
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| 218 | attachmentsOptions="-a ${metricsFile} ${attachmentsOptions}" |
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| 219 | done |
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[1204] | 220 | IGCM_debug_Print 2 "IGCM_debug_sendAMQP_Metrics " |
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[1162] | 221 | echo ${encodedBody}|mailx -s "[TEMPORARY AMQP CHANNEL]" ${attachmentsOptions} ${mail_recipient} |
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| 222 | fi |
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| 223 | |
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| 224 | # Allways all good for now. |
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| 225 | return 0 |
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| 226 | } |
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| 227 | |
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| 228 | #D-#================================================================== |
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[913] | 229 | #D-function IGCM_debug_SendAMQP |
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| 230 | #D- * Purpose: Send body; encoded body and config.card to rabbitMQ |
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[1053] | 231 | function IGCM_debug_sendAMQP { |
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| 232 | |
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[913] | 233 | typeset decal first additionnalOption encodedBody |
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| 234 | |
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| 235 | # Encode message Body |
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| 236 | encodedBody=$( echo "${Body}" | base64 -w 0 ) |
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| 237 | |
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| 238 | # Send config.card ? |
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| 239 | if [ X${1} = Xactivate ] ; then |
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| 240 | # Encode config.card |
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| 241 | cat ${SUBMIT_DIR}/config.card | base64 -w 0 > ${SUBMIT_DIR}/config.card.base64 |
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| 242 | # Prepare additionnal option |
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| 243 | additionnalOption="-f ${SUBMIT_DIR}/config.card.base64" |
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[1076] | 244 | # |
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[1051] | 245 | initBigBro=true |
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[913] | 246 | else |
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| 247 | additionnalOption= |
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[1051] | 248 | # |
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| 249 | initBigBro=false |
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[913] | 250 | fi |
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| 251 | |
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| 252 | # Only cosmetics : stack file |
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[1115] | 253 | if [ X${ActivateStackFilling} = Xtrue ] ; then |
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| 254 | decal=0 |
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| 255 | while [ ${decal} -lt ${IGCM_debug_LenStack} ]; do |
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| 256 | printf ' ' >> ${StackFileLocation}/${StackFileName} |
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| 257 | (( decal = decal + 1 )) |
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| 258 | done |
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| 259 | # Log to stack file using human readable format |
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| 260 | echo "${Body}" >> ${StackFileLocation}/${StackFileName} |
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| 261 | fi |
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[913] | 262 | |
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[983] | 263 | # Log separately encoded AMQP message command for reuse in a mock up |
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[1120] | 264 | #echo sendAMQPMsg -h localhost -p 5672 ${additionnalOption} -b ${encodedBody} >> ${RUN_DIR_PATH}/send.AMQP.${config_UserChoices_JobName}.${config_UserChoices_ExperimentName}.${config_UserChoices_SpaceName}.${config_UserChoices_TagName}.${CumulPeriod}.history.txt |
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[913] | 265 | |
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| 266 | # Send the message |
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[983] | 267 | if [ X${BigBrotherChannel} = XMAIL ] ; then |
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| 268 | IGCM_debug_send_AMQP_msg__MAILTUNNEL "${encodedBody}" |
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| 269 | status=$? |
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| 270 | else |
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| 271 | sendAMQPMsg -h localhost -p 5672 ${additionnalOption} -b ${encodedBody} |
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| 272 | status=$? |
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| 273 | fi |
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| 274 | |
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[913] | 275 | if [ ${status} -gt 0 ] ; then |
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| 276 | IGCM_debug_Print 2 "IGCM_debug_Push/PopStack/ActivateBigBro : command sendAMQPMsg failed error code ${status}" |
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[1051] | 277 | echo sendAMQPMsg -h localhost -p 5672 -b "${Body}" |
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[1090] | 278 | exit 1 |
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[913] | 279 | fi |
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| 280 | } |
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| 281 | |
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| 282 | #D-#================================================================== |
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[2] | 283 | #D-function IGCM_debug_CallStack |
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[913] | 284 | #D-* Purpose: Print the call stack tree from the oldest to the youngest (opposite of the display standard) |
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[2] | 285 | #D- |
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| 286 | function IGCM_debug_CallStack { |
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[544] | 287 | if ( $DEBUG_debug ) ; then |
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[913] | 288 | # Cosmetics |
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[544] | 289 | typeset i decal |
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[823] | 290 | i=0 |
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[544] | 291 | until [ $i -eq ${IGCM_debug_LenStack} ]; do |
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| 292 | decal=0 |
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| 293 | until [ $decal -eq ${i} ]; do |
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[869] | 294 | printf -- ' ' |
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[823] | 295 | (( decal = decal + 1 )) |
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[544] | 296 | done |
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[869] | 297 | echo "$i - ${IGCM_debug_Stack[$(( $IGCM_debug_LenStack-$i-1 ))]}" "(${IGCM_debug_StackArgs[$(( $IGCM_debug_LenStack-$i-1 ))]})" |
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[823] | 298 | ((i = i + 1)) |
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[544] | 299 | done |
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| 300 | fi |
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[2] | 301 | } |
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| 302 | |
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| 303 | #D-#================================================================== |
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| 304 | #D-function IGCM_debug_PushStack |
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| 305 | #D-* Purpose: Push a function name in the stack |
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| 306 | #D- |
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| 307 | function IGCM_debug_PushStack { |
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[544] | 308 | if ( $DEBUG_debug ) ; then |
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[913] | 309 | typeset decal inputs startTime_ms |
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| 310 | |
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| 311 | # Only cosmetics : stack file |
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[1115] | 312 | if [ X${ActivateStackFilling} = Xtrue ] ; then |
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| 313 | echo >> ${StackFileLocation}/${StackFileName} |
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| 314 | decal=0 |
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| 315 | while [ ${decal} -lt ${IGCM_debug_LenStack} ]; do |
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| 316 | printf ' ' >> ${StackFileLocation}/${StackFileName} |
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| 317 | (( decal = decal + 1 )) |
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| 318 | done |
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[2] | 319 | |
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[1115] | 320 | # Fill the stack file |
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| 321 | echo "> ${IGCM_debug_LenStack} : ${@}" >> ${StackFileLocation}/${StackFileName} |
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| 322 | fi |
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[926] | 323 | |
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[913] | 324 | # Save input list in an indexed array |
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[823] | 325 | INPUTS=( $@ ) |
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[913] | 326 | |
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| 327 | # Get timing information |
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| 328 | startTime_ms=$( IGCM_debug_getDate_ms ) |
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| 329 | |
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[544] | 330 | # We add function call name on beginning of the stack |
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| 331 | set +A IGCM_debug_Stack -- ${1} ${IGCM_debug_Stack[*]} |
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[2] | 332 | |
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[913] | 333 | # Save timing in milliseconds in an indexed array |
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| 334 | set +A IGCM_debug_StackTiming -- ${startTime_ms} ${IGCM_debug_StackTiming[*]} |
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| 335 | |
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[544] | 336 | # We include the "null" Args in the beginning of the StackArgs |
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[913] | 337 | set +A IGCM_debug_StackArgs ${NULL_STR} ${IGCM_debug_StackArgs[*]} |
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| 338 | |
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[544] | 339 | # Then, we shift StackArgs tabular |
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[1065] | 340 | # Replacing blank separated list by comma separated list of quoted elements (except the first and last element) |
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[913] | 341 | if [ $# -gt 1 ]; then |
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[1065] | 342 | IGCM_debug_StackArgs[0]=$(echo ${INPUTS[*]:1} | sed -e "s/\ /\",\"/g" ) |
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[544] | 343 | fi |
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[855] | 344 | |
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| 345 | # Increment LenStack |
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[544] | 346 | (( IGCM_debug_LenStack = IGCM_debug_LenStack + 1 )) |
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[2] | 347 | |
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[869] | 348 | #IGCM_debug_CallStack |
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[544] | 349 | fi |
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[2] | 350 | } |
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| 351 | |
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| 352 | #D-#================================================================== |
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| 353 | #D-function IGCM_debug_PopStack |
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| 354 | #D-* Purpose: Pop a function name in the stack |
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| 355 | #D- |
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| 356 | function IGCM_debug_PopStack { |
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[544] | 357 | if ( $DEBUG_debug ) ; then |
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[926] | 358 | typeset i decal command arguments startTime_ms endTime_ms |
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[941] | 359 | typeset instrumentation dest prefix |
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[926] | 360 | # they are not typeset because they are send "by adress" to son functions |
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| 361 | # we unset them to avoid "memory effect" |
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| 362 | unset fileList source |
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[913] | 363 | |
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| 364 | # INTRODUCE SIMPLE ERROR GENERATOR TO TEST SUPERVISOR |
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| 365 | # PROBABILITY ERROR IS 0.0001 PER COMMAND OR FUNCTION CALL |
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| 366 | # THERE ARE ~500 COMMAND OR FUNCTION CALL PER PERIOD |
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| 367 | if ( ${RandomError} ) ; then |
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| 368 | if [ $((RANDOM%10000)) -le 10 ] ; then |
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| 369 | IGCM_debug_Print 1 "Random error has been triggered" |
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[1115] | 370 | if [ X${ActivateStackFilling} = Xtrue ] ; then |
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| 371 | echo "RANDOM ERROR" >> ${StackFileLocation}/${StackFileName} |
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| 372 | fi |
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[913] | 373 | ExitFlag=true |
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| 374 | fi |
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| 375 | fi |
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| 376 | |
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[544] | 377 | if [ "${IGCM_debug_Stack[0]}" = "${1}" ]; then |
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[913] | 378 | # Everything is cool |
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| 379 | |
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| 380 | # Get timing information |
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| 381 | endTime_ms=$( IGCM_debug_getDate_ms ) |
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| 382 | |
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| 383 | # Save Stack information before poping the stack |
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| 384 | command=${IGCM_debug_Stack[0]} |
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| 385 | |
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[1084] | 386 | # Go from comma separated list of quoted elements (except the first and the last element) |
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| 387 | # to unquoted space separated elements in an array |
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[1083] | 388 | set -A arguments -- $( echo ${IGCM_debug_StackArgs[0]} | sed -e "s/\",\"/\ /g" ) |
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[913] | 389 | |
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| 390 | # Save Stack information before poping the stack |
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| 391 | startTime_ms=${IGCM_debug_StackTiming[0]} |
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| 392 | |
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| 393 | # Pop the stack |
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[823] | 394 | (( IGCM_debug_LenStack = IGCM_debug_LenStack - 1 )) |
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| 395 | set -A IGCM_debug_Stack -- ${IGCM_debug_Stack[*]:1} |
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| 396 | set -A IGCM_debug_StackArgs -- ${IGCM_debug_StackArgs[*]:1} |
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[913] | 397 | set -A IGCM_debug_StackTiming -- ${IGCM_debug_StackTiming[*]:1} |
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[544] | 398 | else |
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| 399 | echo 'IGCM_debug_Exit : stack is corrupted ! LenStack =' ${IGCM_debug_LenStack} |
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| 400 | IGCM_debug_Exit $@ |
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| 401 | fi |
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[913] | 402 | |
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[914] | 403 | # Special actions depending on command to prepare IGCM_debug_PrintInfosActions call |
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[913] | 404 | # We are interested in: |
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| 405 | # 0. Which command performs the work |
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| 406 | # 1. Size of entity we are working with |
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| 407 | # 2. Where are we reading |
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| 408 | # 3. Where are we writing |
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| 409 | # 4. How long it took |
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| 410 | |
---|
[915] | 411 | instrumentation=false |
---|
| 412 | |
---|
[913] | 413 | case ${command} in |
---|
[925] | 414 | # Classical copy (only files are given to IGCM_sys_Cp as options) |
---|
| 415 | IGCM_sys_Cp) |
---|
| 416 | instrumentation=true |
---|
| 417 | # All but the latest |
---|
| 418 | fileList=${arguments[*]:0:${#arguments[*]}-1} |
---|
| 419 | # just need the first file to get the directory |
---|
| 420 | source=${arguments[0]} |
---|
| 421 | # Nothing but the latest |
---|
| 422 | dest=${arguments[${#arguments[*]}-1]} |
---|
| 423 | # Size of file whose name are stored in a list |
---|
| 424 | entitySize=$( IGCM_debug_sizeOfTabContent fileList ${dest} ) |
---|
| 425 | ;; |
---|
| 426 | |
---|
[913] | 427 | # Copy from archive machine or from buffer |
---|
| 428 | IGCM_sys_Get|IGCM_sys_GetBuffer) |
---|
[915] | 429 | instrumentation=true |
---|
[913] | 430 | if [ ${#arguments[*]} -eq 2 ] ; then |
---|
| 431 | source=${arguments[0]} |
---|
| 432 | dest=${arguments[1]} |
---|
| 433 | # Size of file whose name are stored in a variable |
---|
[917] | 434 | entitySize=$( IGCM_debug_sizeOfTabContent source ${dest} ) |
---|
[913] | 435 | elif ( [ ${#arguments[*]} -eq 3 ] && [ ${arguments[0]} = '/l' ] ) ; then |
---|
[936] | 436 | # IGCM_sys_Get /l liste_file[*] /ccc/scratch/cont003/dsm/p86denv/RUN_DIR/985998_14754/ |
---|
[913] | 437 | # Keep the array name hosting the all list |
---|
[936] | 438 | eval set +A fileList \${${arguments[1]}} |
---|
[913] | 439 | # just need the first file to get the directory |
---|
[936] | 440 | source=${fileList[0]} |
---|
[931] | 441 | dest=${arguments[2]} |
---|
[934] | 442 | # Size of file whose name are stored in a list |
---|
[936] | 443 | entitySize=$( IGCM_debug_sizeOfTabContent fileList[*] ${dest} ) |
---|
[913] | 444 | elif [ [ ${#arguments[*]} -ge 3 ] ; then |
---|
| 445 | # All but the latest |
---|
[916] | 446 | fileList=${arguments[*]:0:${#arguments[*]}-1} |
---|
[913] | 447 | # just need the first file to get the directory |
---|
| 448 | source=${arguments[0]} |
---|
| 449 | # Nothing but the latest |
---|
| 450 | dest=${arguments[${#arguments[*]}-1]} |
---|
| 451 | # Size of file whose name are stored in a list |
---|
[917] | 452 | entitySize=$( IGCM_debug_sizeOfTabContent fileList ${dest} ) |
---|
[913] | 453 | fi |
---|
| 454 | ;; |
---|
| 455 | |
---|
[925] | 456 | # Copy from compute node or copy to archive/buffer |
---|
| 457 | IGCM_sys_Get_Master|IGCM_sys_Get_Dir|IGCM_sys_Put_Out|IGCM_sys_PutBuffer_Out) |
---|
[924] | 458 | instrumentation=true |
---|
[916] | 459 | source=${arguments[0]} |
---|
[924] | 460 | dest=${arguments[1]} |
---|
| 461 | # Size of file whose name are stored in a variable |
---|
| 462 | entitySize=$( IGCM_debug_sizeOfTabContent source ${dest} ) |
---|
[913] | 463 | ;; |
---|
| 464 | |
---|
| 465 | # Rebuild command |
---|
| 466 | IGCM_sys_rebuild|IGCM_sys_rebuild_station) |
---|
[915] | 467 | instrumentation=true |
---|
[913] | 468 | # All but the first |
---|
| 469 | fileList=${arguments[*]:1:${#arguments[*]}-1} |
---|
| 470 | # just need a file to get the directory |
---|
| 471 | source=${arguments[1]} |
---|
| 472 | # Nothing but the first |
---|
| 473 | dest=${arguments[0]} |
---|
| 474 | # Size of file whose name are stored in a list |
---|
[917] | 475 | entitySize=$( IGCM_debug_sizeOfTabContent fileList ${dest} ) |
---|
[913] | 476 | ;; |
---|
[941] | 477 | |
---|
[926] | 478 | # NCO commands |
---|
| 479 | IGCM_sys_ncrcat|IGCM_sys_ncecat|IGCM_sys_ncra|IGCM_sys_ncks|IGCM_sys_cdo) |
---|
| 480 | # Example of what we want to catch : only filenames in those command lines |
---|
| 481 | # IGCM_sys_ncrcat -O -v ${list_var_final_ncrcat} ${OUT_SE[*]} ${RESULT_SE} |
---|
| 482 | # IGCM_sys_ncrcat --hst -v ${liste_coord}${var} ${file1} ${liste_file_tmp[*]} ${file_out} |
---|
| 483 | # IGCM_sys_ncrcat -p ${dir} ${liste_file_tmp} --output ${output} |
---|
| 484 | # IGCM_sys_ncrcat -x -v ${list_var} -p ${dir} ${liste_file_tmp} --output ${output} |
---|
| 485 | instrumentation=true |
---|
[941] | 486 | keepGoing=true |
---|
| 487 | prefix=. |
---|
[926] | 488 | i=0 |
---|
| 489 | while ( ${keepGoing} ) ; do |
---|
[941] | 490 | # the last one is not interesting |
---|
| 491 | if [ ${i} -eq ${#arguments[*]}-1 ] ; then |
---|
| 492 | keepGoing=false |
---|
| 493 | # look after "-p" option. Path prefix is the following arguments |
---|
| 494 | elif [ ${arguments[${i}]} = "-p" ] ; then |
---|
[926] | 495 | ((i = i + 1)) |
---|
[941] | 496 | prefix=${arguments[${i}]} |
---|
| 497 | ((i = i + 1)) |
---|
| 498 | elif [ ${i} -eq ${#arguments[*]}-1 ] ; then |
---|
[926] | 499 | keepGoing=false |
---|
[941] | 500 | # looking for files |
---|
| 501 | elif [ -f ${prefix}/${arguments[${i}]} ] ; then |
---|
| 502 | fileList="${fileList} ${prefix}/${arguments[${i}]}" |
---|
| 503 | ((i = i + 1)) |
---|
| 504 | # other options are not interesting |
---|
[926] | 505 | else |
---|
| 506 | ((i = i + 1)) |
---|
| 507 | fi |
---|
| 508 | done |
---|
[941] | 509 | |
---|
[926] | 510 | # i value is at least 1 |
---|
| 511 | # just need one file to get the directory |
---|
[941] | 512 | source=$( echo ${fileList} | gawk '{print $1}' ) |
---|
[926] | 513 | # Nothing but the latest |
---|
| 514 | dest=${arguments[${#arguments[*]}-1]} |
---|
| 515 | # Size of file whose name are stored in a list |
---|
| 516 | entitySize=$( IGCM_debug_sizeOfTabContent fileList ${dest} ) |
---|
| 517 | ;; |
---|
[913] | 518 | esac |
---|
| 519 | |
---|
| 520 | # Print information related to instrumentation |
---|
[915] | 521 | ( ${instrumentation} ) && IGCM_debug_PrintInfosActions ${command} ${entitySize} ${startTime_ms} ${endTime_ms} ${dest} ${source} |
---|
[913] | 522 | |
---|
| 523 | # Only cosmetics : stack file |
---|
[1115] | 524 | if [ X${ActivateStackFilling} = Xtrue ] ; then |
---|
| 525 | decal=0 |
---|
| 526 | while [ ${decal} -lt ${IGCM_debug_LenStack} ]; do |
---|
| 527 | printf ' ' >> ${StackFileLocation}/${StackFileName} |
---|
| 528 | (( decal = decal + 1 )) |
---|
| 529 | done |
---|
| 530 | fi |
---|
[2] | 531 | |
---|
[855] | 532 | if ( ${ExitFlag} ) ; then |
---|
| 533 | # Inform the stack file |
---|
[1115] | 534 | if [ X${ActivateStackFilling} = Xtrue ] ; then |
---|
| 535 | echo '!!! ExitFlag has been activated !!!' >> ${StackFileLocation}/${StackFileName} |
---|
| 536 | fi |
---|
[874] | 537 | |
---|
[1216] | 538 | # Unplugged message 4900 handling for now. To ease downstream treatment. |
---|
[1244] | 539 | if [ X${ActivateBigBro} = Xtrue ] ; then |
---|
| 540 | if [ X${TaskType} = Xcomputing ]; then |
---|
| 541 | # RabbitMQ message code "COMPUTING JOBs COMMAND FAILURE" |
---|
| 542 | code=1900 |
---|
| 543 | elif [ X${TaskType} = Xpost-processing ]; then |
---|
| 544 | # RabbitMQ message code "POST-PROCESSING JOBs COMMAND FAILURE" |
---|
| 545 | code=2900 |
---|
| 546 | elif [ X${TaskType} = Xchecking ]; then |
---|
| 547 | # RabbitMQ message code "POST-PROCESSING FROM CHECKER JOBs COMMAND FAILURE" |
---|
| 548 | code=3900 |
---|
| 549 | fi |
---|
| 550 | # RabbitMQ message body |
---|
| 551 | Body=$( echo "{${genericSimulationID},\"msgCode\":\"${code}\",\"msgUID\":\"$(uuidgen)\",\"command\":\"${command}\",\"msgTimestamp\":\"$( date +"%Y-%m-%dT%H:%M:%S.%N%z" )\"}" ) |
---|
| 552 | |
---|
| 553 | # Fill the rabbitMQ queue |
---|
| 554 | IGCM_debug_sendAMQP |
---|
| 555 | fi |
---|
[855] | 556 | else |
---|
| 557 | # Inform the stack file |
---|
[1115] | 558 | if [ X${ActivateStackFilling} = Xtrue ] ; then |
---|
| 559 | echo "< ${IGCM_debug_LenStack} : ${@}" >> ${StackFileLocation}/${StackFileName} |
---|
| 560 | fi |
---|
[855] | 561 | fi |
---|
| 562 | |
---|
[913] | 563 | # Reset array if necessary |
---|
[544] | 564 | if [ ${IGCM_debug_LenStack} = 0 ]; then |
---|
| 565 | #echo |
---|
| 566 | #IGCM_debug_Print 3 "Clean stack array" |
---|
| 567 | #echo |
---|
| 568 | unset IGCM_debug_Stack |
---|
| 569 | unset IGCM_debug_StackArgs |
---|
[913] | 570 | unset IGCM_debug_StackTiming |
---|
[544] | 571 | IGCM_debug_Stack[0]=${NULL_STR} |
---|
| 572 | IGCM_debug_StackArgs[0]=${NULL_STR} |
---|
[913] | 573 | IGCM_debug_StackTiming[0]=${NULL_STR} |
---|
[2] | 574 | fi |
---|
[544] | 575 | fi |
---|
[869] | 576 | #IGCM_debug_CallStack |
---|
[2] | 577 | } |
---|
| 578 | |
---|
| 579 | #D-#================================================================== |
---|
[1189] | 580 | #D-function IGCM_debug_BigBro_Initialize |
---|
[855] | 581 | #D-* Purpose: switch rabbitMQ on |
---|
| 582 | #D- |
---|
[1189] | 583 | function IGCM_debug_BigBro_Initialize { |
---|
| 584 | IGCM_debug_PushStack "IGCM_debug_BigBro_Initialize" |
---|
[855] | 585 | |
---|
[1244] | 586 | typeset postProcessingIDLength postProcessingName postProcessingDate postProcessingDimn postProcessingComp postProcessingFile |
---|
[1229] | 587 | |
---|
[1051] | 588 | # Message type standard fields: |
---|
| 589 | # https://github.com/Prodiguer/prodiguer-docs/wiki/MQ-Standard-Message-Fields |
---|
| 590 | |
---|
| 591 | # Message type dictionnary and custom fields: |
---|
| 592 | # https://github.com/Prodiguer/prodiguer-docs/wiki/Monitoring-Message-Dictionary |
---|
| 593 | |
---|
[868] | 594 | if [ X${BigBrother} = Xtrue ] ; then |
---|
[1051] | 595 | # create a unique ID for this specific job |
---|
| 596 | jobuid=$(uuidgen) |
---|
[913] | 597 | |
---|
[1244] | 598 | # get the assigned id by the scheduler for that job |
---|
| 599 | IGCM_sys_getJobSchedulerID jobSchedulerID |
---|
| 600 | |
---|
[1189] | 601 | if [ X${TaskType} = Xcomputing ]; then |
---|
| 602 | if ( ${FirstInitialize} ) ; then |
---|
| 603 | # RabbitMQ message code "BEGIN A SIMULATION" |
---|
| 604 | code=0000 |
---|
| 605 | # create and persist a unique id for this simulation |
---|
| 606 | simuid=$(uuidgen) |
---|
| 607 | IGCM_card_WriteOption ${SUBMIT_DIR}/run.card Configuration simuid ${simuid} |
---|
| 608 | # Standard fields for the first message |
---|
[1244] | 609 | genericSimulationID=$( echo "\"msgApplication\":\"monitoring\",\"msgProducer\":\"libigcm\",\"msgProducerVersion\":\"${libIGCMVersion}\",\"activity\":\"IPSL\",\"name\":\"${config_UserChoices_JobName}\",\"experiment\":\"${config_UserChoices_ExperimentName}\",\"space\":\"${config_UserChoices_SpaceName}\",\"model\":\"${config_UserChoices_TagName}\",\"startDate\":\"${config_UserChoices_DateBegin}\",\"endDate\":\"${config_UserChoices_DateEnd}\",\"login\":\"${LOGIN}\",\"centre\":\"${CENTER}\",\"machine\":\"${MASTER}\",\"simuid\":\"${simuid}\",\"jobuid\":\"${jobuid}\"" ) |
---|
[1189] | 610 | # RabbitMQ message body with specific fields associated message codes treated here |
---|
[1202] | 611 | Body=$( echo "{${genericSimulationID},\"msgCode\":\"${code}\",\"accountingProject\":\"${PROJECT}\",\"jobWarningDelay\":\"${jobWarningDelay}\",\"msgUID\":\"$(uuidgen)\",\"msgTimestamp\":\"$( date +"%Y-%m-%dT%H:%M:%S.%N%z" )\"}" ) |
---|
[1189] | 612 | # Fill the rabbitMQ queue (the config.card in use will be sent) |
---|
| 613 | IGCM_debug_sendAMQP activate |
---|
| 614 | else |
---|
| 615 | # RabbitMQ message code "A NEW COMPUTING JOB IS RUNNING PART OF A SIMULATION" |
---|
| 616 | code=1000 |
---|
| 617 | # retrieve this simulation's unique id |
---|
| 618 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration simuid |
---|
| 619 | simuid=${run_Configuration_simuid} |
---|
| 620 | # Using standard fields for message others than the first one. Still subject to change |
---|
[1244] | 621 | genericSimulationID=$( echo "\"msgApplication\":\"monitoring\",\"msgProducer\":\"libigcm\",\"msgProducerVersion\":\"${libIGCMVersion}\",\"simuid\":\"${simuid}\",\"jobuid\":\"${jobuid}\"" ) |
---|
[1189] | 622 | # RabbitMQ message body with specific fields associated message codes treated here |
---|
[1244] | 623 | Body=$( echo "{${genericSimulationID},\"msgCode\":\"${code}\",\"accountingProject\":\"${PROJECT}\",\"jobWarningDelay\":\"${jobWarningDelay}\",\"jobSchedulerID\":\"${jobSchedulerID}\",\"jobSubmissionPath\":\"${SUBMIT_DIR}\",\"msgUID\":\"$(uuidgen)\",\"msgTimestamp\":\"$( date +"%Y-%m-%dT%H:%M:%S.%N%z" )\"}" ) |
---|
[1189] | 624 | # Fill the rabbitMQ queue |
---|
| 625 | IGCM_debug_sendAMQP |
---|
| 626 | fi |
---|
| 627 | |
---|
| 628 | # NOT VERY NICE BUT ... IT WORKS |
---|
| 629 | # Be sure that the genericSimulationID will be small from now on |
---|
| 630 | # Using standard fields for messages others than the first one. Still subject to change |
---|
[1244] | 631 | genericSimulationID=$( echo "\"msgApplication\":\"monitoring\",\"msgProducer\":\"libigcm\",\"msgProducerVersion\":\"${libIGCMVersion}\",\"simuid\":\"${simuid}\",\"jobuid\":\"${jobuid}\"" ) |
---|
[1189] | 632 | |
---|
| 633 | elif [ X${TaskType} = Xpost-processing ]; then |
---|
| 634 | # RabbitMQ message code "A NEW POST-PROCESSING JOB IS RUNNING PART OF A SIMULATION" |
---|
| 635 | code=2000 |
---|
[1076] | 636 | # retrieve this simulation's unique id |
---|
[1051] | 637 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration simuid |
---|
[1086] | 638 | simuid=${run_Configuration_simuid} |
---|
[1076] | 639 | # Using standard fields for message others than the first one. Still subject to change |
---|
[1244] | 640 | genericSimulationID=$( echo "\"msgApplication\":\"monitoring\",\"msgProducer\":\"libigcm\",\"msgProducerVersion\":\"${libIGCMVersion}\",\"simuid\":\"${simuid}\",\"jobuid\":\"${jobuid}\"" ) |
---|
[1229] | 641 | |
---|
| 642 | # Specify the post-processing task we are dealing with |
---|
[1244] | 643 | postProcessingIDLength=$( echo "${Script_Post_Output}" | tr -d -c "\." | wc -c ) |
---|
[1229] | 644 | postProcessingName=$( echo "${Script_Post_Output}" | gawk -F. '{print $1}' ) |
---|
| 645 | postProcessingDate=$( echo "${Script_Post_Output}" | gawk -F. '{print $2}' ) |
---|
[1231] | 646 | postProcessingDimn="null" |
---|
| 647 | postProcessingComp="null" |
---|
| 648 | postProcessingFile="null" |
---|
[1254] | 649 | if [ ${postProcessingIDLength} -eq 2 ] ; then |
---|
[1231] | 650 | postProcessingDimn=$( echo "${Script_Post_Output}" | gawk -F. '{print $3}' ) |
---|
[1254] | 651 | elif [ ${postProcessingIDLength} -eq 4 ] ; then |
---|
[1229] | 652 | postProcessingComp=$( echo "${Script_Post_Output}" | gawk -F. '{print $4}' ) |
---|
| 653 | postProcessingFile=$( echo "${Script_Post_Output}" | gawk -F. '{print $5}' ) |
---|
| 654 | fi |
---|
| 655 | |
---|
[1087] | 656 | # RabbitMQ message body with specific fields associated message codes treated here |
---|
[1244] | 657 | Body=$( echo "{${genericSimulationID},\"msgCode\":\"${code}\",\"accountingProject\":\"${PROJECT}\",\"jobWarningDelay\":\"${jobWarningDelay}\",\"jobSchedulerID\":\"${jobSchedulerID}\",\"jobSubmissionPath\":\"${SUBMIT_DIR}\",\"msgUID\":\"$(uuidgen)\",\"msgTimestamp\":\"$( date +"%Y-%m-%dT%H:%M:%S.%N%z" )\",\"postProcessingName\":\"${postProcessingName}\",\"postProcessingDate\":\"${postProcessingDate}\",\"postProcessingDimn\":\"${postProcessingDimn}\",\"postProcessingComp\":\"${postProcessingComp}\",\"postProcessingFile\":\"${postProcessingFile}\"}" ) |
---|
[1087] | 658 | # Fill the rabbitMQ queue |
---|
| 659 | IGCM_debug_sendAMQP |
---|
[855] | 660 | fi |
---|
[913] | 661 | # Turn the flag on |
---|
[855] | 662 | ActivateBigBro=true |
---|
| 663 | fi |
---|
[1189] | 664 | IGCM_debug_PopStack "IGCM_debug_BigBro_Initialize" |
---|
[855] | 665 | } |
---|
| 666 | |
---|
| 667 | #D-#================================================================== |
---|
[1189] | 668 | #D-function IGCM_debug_BigBro_Finalize |
---|
| 669 | #D-* Purpose: Finalize rabbitMQ messages exchanges |
---|
| 670 | #D- |
---|
| 671 | function IGCM_debug_BigBro_Finalize { |
---|
| 672 | IGCM_debug_PushStack "IGCM_debug_BigBro_Finalize" |
---|
| 673 | |
---|
| 674 | # Message type standard fields: |
---|
| 675 | # https://github.com/Prodiguer/prodiguer-docs/wiki/MQ-Standard-Message-Fields |
---|
| 676 | |
---|
| 677 | # Message type dictionnary and custom fields: |
---|
| 678 | # https://github.com/Prodiguer/prodiguer-docs/wiki/Monitoring-Message-Dictionary |
---|
| 679 | |
---|
| 680 | if ( $DEBUG_debug ) ; then |
---|
| 681 | if [ X${ActivateBigBro} = Xtrue ] ; then |
---|
| 682 | if [ X${TaskType} = Xcomputing ]; then |
---|
| 683 | if ( ${simulationIsOver} ) ; then |
---|
| 684 | # RabbitMQ message code "SIMULATION ENDS" |
---|
| 685 | code=0100 |
---|
| 686 | FlushAMQP=true |
---|
[1207] | 687 | elif ( ${ExitFlag} ) ; then |
---|
| 688 | # RabbitMQ message code "EXIT THE JOBS BECAUSE ERROR(S) HAS BEEN TRIGGERED" |
---|
[1244] | 689 | code=1999 |
---|
[1207] | 690 | FlushAMQP=true |
---|
[1189] | 691 | else |
---|
| 692 | # RabbitMQ message code "COMPUTING JOB ENDS" |
---|
| 693 | code=1100 |
---|
| 694 | fi |
---|
| 695 | elif [ X${TaskType} = Xpost-processing ]; then |
---|
[1207] | 696 | if ( ${ExitFlag} ) ; then |
---|
| 697 | # RabbitMQ message code "POST-PROCESSING JOB FAILS" |
---|
[1244] | 698 | code=2999 |
---|
[1207] | 699 | FlushAMQP=true |
---|
[1244] | 700 | else |
---|
[1207] | 701 | # RabbitMQ message code "POST-PROCESSING JOB ENDS" |
---|
| 702 | code=2100 |
---|
| 703 | FlushAMQP=true |
---|
| 704 | fi |
---|
[1244] | 705 | elif [ X${TaskType} = Xchecking ]; then |
---|
| 706 | if ( ${ExitFlag} ) ; then |
---|
| 707 | # RabbitMQ message code "POST-PROCESSING JOB FAILS" |
---|
| 708 | code=3999 |
---|
| 709 | FlushAMQP=true |
---|
| 710 | else |
---|
| 711 | # RabbitMQ message code "POST-PROCESSING JOB ENDS" |
---|
| 712 | code=3100 |
---|
| 713 | FlushAMQP=true |
---|
| 714 | fi |
---|
[1189] | 715 | fi |
---|
| 716 | # RabbitMQ message body |
---|
| 717 | Body=$( echo "{${genericSimulationID},\"msgCode\":\"${code}\",\"msgUID\":\"$(uuidgen)\",\"msgTimestamp\":\"$( date +"%Y-%m-%dT%H:%M:%S.%N%z" )\"}" ) |
---|
| 718 | # Fill the rabbitMQ queue |
---|
| 719 | IGCM_debug_sendAMQP |
---|
| 720 | fi |
---|
| 721 | fi |
---|
| 722 | |
---|
| 723 | IGCM_debug_PopStack "IGCM_debug_BigBro_Finalize" |
---|
| 724 | } |
---|
| 725 | |
---|
| 726 | #D-#================================================================== |
---|
[2] | 727 | #D-function IGCM_debug_Exit |
---|
| 728 | #D-* Purpose: Print Call Stack and set ExitFlag to true |
---|
| 729 | #D- |
---|
| 730 | function IGCM_debug_Exit { |
---|
[544] | 731 | IGCM_debug_PushStack "IGCM_debug_Exit" |
---|
| 732 | echo "IGCM_debug_Exit : " "${@}" |
---|
[913] | 733 | echo |
---|
[894] | 734 | echo "!!!!!!!!!!!!!!!!!!!!!!!!!!" |
---|
[913] | 735 | echo "!! ERROR TRIGGERED !!" |
---|
| 736 | echo "!! EXIT FLAG SET !!" |
---|
| 737 | echo "!------------------------!" |
---|
| 738 | echo |
---|
[894] | 739 | IGCM_debug_CallStack |
---|
[544] | 740 | ExitFlag=true |
---|
| 741 | IGCM_debug_PopStack "IGCM_debug_Exit" |
---|
[2] | 742 | } |
---|
| 743 | |
---|
| 744 | #D-#================================================== |
---|
| 745 | #D-function IGCM_debug_Verif_Exit |
---|
| 746 | #D-* Purpose: exit with number 1 if ExitFlag is true |
---|
| 747 | #D- |
---|
| 748 | function IGCM_debug_Verif_Exit { |
---|
[544] | 749 | if ( ${ExitFlag} ) ; then |
---|
[1206] | 750 | echo "IGCM_debug_Verif_Exit : Something wrong happened previously." |
---|
[1207] | 751 | echo "IGCM_debug_Verif_Exit : ERROR and EXIT keyword will help find out where." |
---|
[1206] | 752 | # Only computing TaskType stops the job for now. |
---|
| 753 | if [ X${TaskType} = Xcomputing ] ; then |
---|
[775] | 754 | IGCM_card_WriteOption ${SUBMIT_DIR}/run.card Configuration PeriodState "Fatal" |
---|
| 755 | echo " EXIT THE JOB." |
---|
| 756 | echo |
---|
[869] | 757 | IGCM_debug_CallStack |
---|
[874] | 758 | |
---|
[1206] | 759 | # Mail notification |
---|
| 760 | IGCM_sys_SendMail |
---|
[913] | 761 | |
---|
[1207] | 762 | # Inform the rabbitMQ queue |
---|
| 763 | IGCM_debug_BigBro_Finalize |
---|
| 764 | |
---|
[544] | 765 | # And Good Bye |
---|
| 766 | date |
---|
| 767 | exit 1 |
---|
[1206] | 768 | |
---|
| 769 | elif [ X${TaskType} = Xpost-processing ] ; then |
---|
| 770 | # If SpaceName is PROD then we stop when post_processing failed |
---|
| 771 | if [ X${config_UserChoices_SpaceName} = XPROD ] ; then |
---|
[1220] | 772 | echo " EXIT THE POST-PROCESSING JOB." |
---|
[1206] | 773 | echo |
---|
[1207] | 774 | IGCM_debug_CallStack |
---|
| 775 | |
---|
[1220] | 776 | # Notify the computing job that something wrong happened. |
---|
| 777 | IGCM_card_WriteOption ${SUBMIT_DIR}/run.card Configuration PeriodState "Fatal" |
---|
| 778 | |
---|
[1206] | 779 | # Mail notification? |
---|
| 780 | #IGCM_sys_SendMailPost |
---|
[1207] | 781 | |
---|
| 782 | # Inform the rabbitMQ queue |
---|
| 783 | IGCM_debug_BigBro_Finalize |
---|
| 784 | |
---|
[1206] | 785 | # And Good Bye |
---|
| 786 | date |
---|
| 787 | exit 1 |
---|
| 788 | else |
---|
[1207] | 789 | echo "In config.card the variable SpaceName is not in PROD" |
---|
[1206] | 790 | echo " SO WE DO NOT EXIT THE JOB." |
---|
| 791 | echo |
---|
| 792 | date |
---|
| 793 | fi |
---|
| 794 | elif [ X${TaskType} = Xchecking ] ; then |
---|
[1207] | 795 | echo "Nothing will happen for now" |
---|
[2] | 796 | fi |
---|
[544] | 797 | fi |
---|
[2] | 798 | } |
---|
| 799 | |
---|
| 800 | #D-#================================================================== |
---|
| 801 | #D-function IGCM_debug_Print |
---|
| 802 | #D-* Purpose: Print arguments according to a level of verbosity. |
---|
| 803 | #D- |
---|
| 804 | function IGCM_debug_Print |
---|
| 805 | { |
---|
[544] | 806 | typeset level=$1 |
---|
| 807 | shift |
---|
| 808 | |
---|
| 809 | if [ X"${1}" = X"-e" ]; then |
---|
| 810 | typeset cmd_echo="echo -e" |
---|
[2] | 811 | shift |
---|
[544] | 812 | else |
---|
| 813 | typeset cmd_echo="echo" |
---|
| 814 | fi |
---|
[2] | 815 | |
---|
[544] | 816 | if [ ${level} -le ${Verbosity} ] ; then |
---|
| 817 | typeset i |
---|
| 818 | case "${level}" in |
---|
| 819 | 1) for i in "$@" ; do |
---|
[734] | 820 | ${cmd_echo} $(date +"%Y-%m-%d %T") "--Debug1-->" ${i} |
---|
[913] | 821 | done ;; |
---|
[544] | 822 | 2) for i in "$@" ; do |
---|
[734] | 823 | ${cmd_echo} $(date +"%Y-%m-%d %T") "--------Debug2-->" ${i} |
---|
[913] | 824 | done ;; |
---|
[544] | 825 | 3) for i in "$@" ; do |
---|
[734] | 826 | ${cmd_echo} $(date +"%Y-%m-%d %T") "--------------Debug3-->" ${i} |
---|
[913] | 827 | done ;; |
---|
[544] | 828 | esac |
---|
| 829 | fi |
---|
[2] | 830 | } |
---|
| 831 | |
---|
| 832 | #D-#================================================================== |
---|
| 833 | #D-function IGCM_debug_PrintVariables |
---|
| 834 | #D-* Purpose: Print arguments when match a pattern |
---|
| 835 | #D- according to a level of verbosity. |
---|
| 836 | function IGCM_debug_PrintVariables |
---|
| 837 | { |
---|
[544] | 838 | typeset level=$1 |
---|
| 839 | shift |
---|
[2] | 840 | |
---|
[830] | 841 | list=$( set | grep ^$1 | sed -e "s/'//g" ) |
---|
[54] | 842 | |
---|
[544] | 843 | if [ "X${list}" != X ] ; then |
---|
| 844 | IGCM_debug_Print ${level} ${list} |
---|
| 845 | fi |
---|
[2] | 846 | } |
---|
| 847 | |
---|
| 848 | #D-#================================================================== |
---|
[914] | 849 | #D-function IGCM_debug_PrintInfosActions |
---|
[913] | 850 | #D-* Purpose: Print information related to instrumentation |
---|
| 851 | function IGCM_debug_PrintInfosActions |
---|
| 852 | { |
---|
| 853 | typeset actionType=$1 |
---|
| 854 | typeset entitySize=$2 |
---|
| 855 | typeset start_ms=$3 |
---|
| 856 | typeset end_ms=$4 |
---|
| 857 | |
---|
| 858 | typeset dest=$5 |
---|
| 859 | typeset source=$6 |
---|
| 860 | |
---|
| 861 | typeset diff_ms entitySizeKo entitySizeMo flux_Ko_ms flux_Ko_s flux_Mo_s |
---|
[1090] | 862 | typeset dirFrom dirTo |
---|
[913] | 863 | |
---|
| 864 | diff_ms=$(( $end_ms - $start_ms )) |
---|
| 865 | # echo "diff_ms=$diff_ms" |
---|
| 866 | |
---|
| 867 | entitySizeKo=$( echo ${entitySize} | gawk -F"|" '{print $1}' ) |
---|
| 868 | # echo "entitySizeKo=$entitySizeKo" |
---|
| 869 | entitySizeMo=$( echo ${entitySize} | gawk -F"|" '{print $2}' ) |
---|
| 870 | |
---|
| 871 | # flux en Ko / ms |
---|
| 872 | flux_Ko_ms=$( echo "scale=6;${entitySizeKo}/${diff_ms}" | bc ) |
---|
| 873 | # echo "flux_Ko_ms=$flux_Ko_ms" |
---|
| 874 | |
---|
| 875 | # flux en Ko / s |
---|
| 876 | flux_Ko_s=$(( $flux_Ko_ms * 1000 )) |
---|
| 877 | # echo "flux_Ko_s=$flux_Ko_s" |
---|
| 878 | |
---|
| 879 | # flux en Mo / s |
---|
| 880 | flux_Mo_s=$( echo "scale=6;${flux_Ko_s}/1024" | bc ) |
---|
| 881 | # echo "flux_Mo_s=$flux_Mo_s" |
---|
| 882 | |
---|
| 883 | if [ -d $dest ] ; then |
---|
[1090] | 884 | dirTo=$( readlink -f ${dest} ) |
---|
[913] | 885 | else |
---|
[1090] | 886 | dirTo=$( readlink -f $( dirname ${dest} ) ) |
---|
[913] | 887 | fi |
---|
| 888 | |
---|
| 889 | if [ -d $source ] ; then |
---|
[1090] | 890 | dirFrom=$( readlink -f ${source} ) |
---|
[913] | 891 | else |
---|
[1090] | 892 | dirFrom=$( readlink -f $( dirname ${source} ) ) |
---|
[913] | 893 | fi |
---|
| 894 | |
---|
[1094] | 895 | instrumentationContent=$( echo "\"actionName\":\"${actionType}\",\"size_Mo\":\"${entitySizeMo}\",\"duration_ms\":\"${diff_ms}\",\"throughput_Mo_s\":\"${flux_Mo_s}\",\"dirFrom\":\"${dirFrom}\",\"dirTo\":\"${dirTo}\"" ) |
---|
[1050] | 896 | |
---|
[1115] | 897 | if [ X${ActivateStackFilling} = Xtrue ] ; then |
---|
| 898 | echo "{${instrumentationContent}}" >> ${StackFileLocation}/${StackFileName} |
---|
| 899 | fi |
---|
[1050] | 900 | |
---|
| 901 | # Inform the rabbitMQ queue |
---|
| 902 | if [ X${ActivateBigBro} = Xtrue ] ; then |
---|
| 903 | # RabbitMQ message body |
---|
[1065] | 904 | Body=$( echo "{${genericSimulationID},\"msgCode\":\"7000\",\"msgUID\":\"$(uuidgen)\",${instrumentationContent},\"msgTimestamp\":\"$( date +"%Y-%m-%dT%H:%M:%S.%N%z" )\"}" ) |
---|
[1050] | 905 | # Fill the rabbitMQ queue |
---|
| 906 | IGCM_debug_sendAMQP |
---|
| 907 | fi |
---|
[913] | 908 | } |
---|
| 909 | |
---|
| 910 | #D-#================================================================== |
---|
[2] | 911 | #D-function IGCM_debug_Check |
---|
| 912 | #D- * Purpose: Check the present file by comparison with a reference file |
---|
| 913 | function IGCM_debug_Check |
---|
| 914 | { |
---|
[544] | 915 | #--------------------- |
---|
| 916 | if [ ! -n "${libIGCM}" ] ; then |
---|
| 917 | echo "Check libIGCM_debug ..........................................[ FAILED ]" |
---|
| 918 | echo "--Error--> libIGCM variable is not defined" |
---|
| 919 | exit 2 |
---|
| 920 | fi |
---|
[2] | 921 | |
---|
[544] | 922 | #--------------------- |
---|
| 923 | if [ ! -n "${Verbosity}" ] ; then |
---|
| 924 | echo "Check libIGCM_debug ..........................................[ FAILED ]" |
---|
| 925 | echo "--Error--> Verbosity variable is not defined" |
---|
| 926 | exit 3 |
---|
| 927 | fi |
---|
[2] | 928 | |
---|
[544] | 929 | #--------------------- |
---|
[1118] | 930 | # Need to remove timestamps here |
---|
| 931 | diff ${libIGCM}/libIGCM_debug/IGCM_debug_Test.ref <(${libIGCM}/libIGCM_debug/IGCM_debug_Test.ksh | sed -e "s:[0-9][0-9][0-9][0-9]-[0-9][0-9]-[0-9][0-9] [0-9][0-9]\:[0-9][0-9]\:[0-9][0-9] ::g") > /dev/null 2>&1 |
---|
[1106] | 932 | status=$? |
---|
[2] | 933 | |
---|
[1118] | 934 | if [ ${status} -eq 0 ] ; then |
---|
[544] | 935 | echo "Check libIGCM_debug ..............................................[ OK ]" |
---|
| 936 | else |
---|
| 937 | echo "Check libIGCM_debug ..........................................[ FAILED ]" |
---|
| 938 | echo "--Error--> Execution of ${libIGCM}/libIGCM_debug/IGCM_debug_Test.ksh" |
---|
| 939 | echo " has produced the file IGCM_debug_Test.ref.failed" |
---|
| 940 | echo " Please analyse differences with the reference file by typing:" |
---|
| 941 | echo " diff IGCM_debug_Test.ref.failed ${libIGCM}/libIGCM_debug/IGCM_debug_Test.ref" |
---|
| 942 | echo " Report errors to the author: Patrick.Brockmann@cea.fr" |
---|
[1118] | 943 | diff ${libIGCM}/libIGCM_debug/IGCM_debug_Test.ref <(${libIGCM}/libIGCM_debug/IGCM_debug_Test.ksh | sed -e "s:[0-9][0-9][0-9][0-9]-[0-9][0-9]-[0-9][0-9] [0-9][0-9]\:[0-9][0-9]\:[0-9][0-9] ::g") |
---|
[544] | 944 | exit 4 |
---|
| 945 | fi |
---|
| 946 | #--------------------- |
---|
[2] | 947 | } |
---|