[108] | 1 | #-Q- platine #!/usr/bin/ksh |
---|
| 2 | #-Q- platine ################### |
---|
| 3 | #-Q- platine ## PLATINE CEA ## |
---|
| 4 | #-Q- platine ################### |
---|
| 5 | #-Q- platine #BSUB -J REBUILDARCH # Nom du job |
---|
| 6 | #-Q- platine #BSUB -N # message a la fin du job |
---|
| 7 | #-Q- platine #BSUB -n 1 # reservation des processeurs pour le job |
---|
| 8 | #-Q- platine #BSUB -W 4:00 # Limite temps |
---|
| 9 | #-Q- platine #BSUB -q post # Passage en queue post |
---|
| 10 | #-Q- sx8brodie #!/bin/ksh |
---|
| 11 | #-Q- sx8brodie ####################### |
---|
| 12 | #-Q- sx8brodie ## SX8BRODIE IDRIS ## |
---|
| 13 | #-Q- sx8brodie ####################### |
---|
| 14 | #-Q- sx8brodie # Temps Elapsed max. d'une requete hh:mm:ss |
---|
| 15 | #-Q- sx8brodie # @ wall_clock_limit = 10:00:00 |
---|
| 16 | #-Q- sx8brodie # Nom du travail LoadLeveler |
---|
| 17 | #-Q- sx8brodie # @ job_name = REBUILDARCH |
---|
| 18 | #-Q- sx8brodie # Fichier de sortie standard du travail |
---|
| 19 | #-Q- sx8brodie # @ output = $(job_name).$(jobid) |
---|
| 20 | #-Q- sx8brodie # Fichier de sortie d'erreur du travail |
---|
| 21 | #-Q- sx8brodie # @ error = $(job_name).$(jobid) |
---|
| 22 | #-Q- sx8brodie # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.) |
---|
| 23 | #-Q- sx8brodie # @ notification = error |
---|
[213] | 24 | #-Q- sx8brodie # @ environment = $DEBUG_debug ; $MODIPSL ; $libIGCM ; $libIGCM_SX ; $SUBMIT_DIR ; $REBUILD_DIR ; $RebuildFromArchive ; $POST_DIR ; $DateBegin ; $PeriodDateBegin ; $PeriodDateEnd ; $NbRebuildDir ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; RESOL_SBG ; $MASTER ; $config_UserChoices_JobName ; $R_SAVE |
---|
[108] | 25 | #-Q- sx8brodie # @ queue |
---|
| 26 | #-Q- aix6 #!/bin/ksh |
---|
| 27 | #-Q- aix6 ####################### |
---|
| 28 | #-Q- aix6 ## VARGAS IDRIS ## |
---|
| 29 | #-Q- aix6 ####################### |
---|
| 30 | #-Q- aix6 # Temps Elapsed max. d'une requete hh:mm:ss |
---|
[159] | 31 | #-Q- aix6 # @ wall_clock_limit = 20:00:00 |
---|
[108] | 32 | #-Q- aix6 # Nom du travail LoadLeveler |
---|
| 33 | #-Q- aix6 # @ job_name = REBUILDARCH |
---|
| 34 | #-Q- aix6 # Fichier de sortie standard du travail |
---|
| 35 | #-Q- aix6 # @ output = $(job_name).$(jobid) |
---|
| 36 | #-Q- aix6 # Fichier de sortie d'erreur du travail |
---|
| 37 | #-Q- aix6 # @ error = $(job_name).$(jobid) |
---|
| 38 | #-Q- aix6 # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.) |
---|
| 39 | #-Q- aix6 # @ notification = error |
---|
[213] | 40 | #-Q- aix6 # @ environment = $DEBUG_debug ; $MODIPSL ; $libIGCM ; $libIGCM_SX ; $SUBMIT_DIR ; $REBUILD_DIR ; $RebuildFromArchive ; $POST_DIR ; $DateBegin ; $PeriodDateBegin ; $PeriodDateEnd ; $NbRebuildDir ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; RESOL_SBG ; $MASTER ; $config_UserChoices_JobName ; $R_SAVE |
---|
[108] | 41 | #-Q- aix6 # @ queue |
---|
| 42 | #-Q- sx8mercure #!/bin/ksh |
---|
| 43 | #-Q- sx8mercure ###################### |
---|
| 44 | #-Q- sx8mercure ## SX8MERCURE CEA ## |
---|
| 45 | #-Q- sx8mercure ###################### |
---|
| 46 | #-Q- sx8mercure #PBS -N REBUILDARCH # Nom du job |
---|
| 47 | #-Q- sx8mercure #PBS -j o # regroupement des stdout et stderr |
---|
| 48 | #-Q- sx8mercure #PBS -S /usr/bin/ksh # shell de soumission |
---|
| 49 | #-Q- sx8mercure #PBS -l memsz_job=1gb # Limite memoire a 1 Go |
---|
| 50 | #-Q- sx8mercure #PBS -l cputim_job=24:00:00 # Limite temps a 1 heures |
---|
| 51 | #-Q- sx8mercure #PBS -q scalaire |
---|
[172] | 52 | #-Q- sx9mercure #!/bin/ksh |
---|
| 53 | #-Q- sx9mercure ###################### |
---|
| 54 | #-Q- sx9mercure ## SX9MERCURE CEA ## |
---|
| 55 | #-Q- sx9mercure ###################### |
---|
[192] | 56 | #-Q- sx9mercure #MSUB -r REBUILDARCH # Nom du job |
---|
| 57 | #-Q- sx9mercure #MSUB -N 1 # Reservation du noeud |
---|
| 58 | #-Q- sx9mercure #MSUB -n 1 # Reservation du processus |
---|
| 59 | #-Q- sx9mercure #MSUB -T 86400 # Limite de temps elapsed du job |
---|
| 60 | #-Q- sx9mercure #MSUB -E "-j o" |
---|
| 61 | #-Q- sx9mercure #MSUB -E "-S /bin/ksh" |
---|
| 62 | #-Q- sx9mercure ##MSUB -e nco.out # Sortie standard |
---|
| 63 | #-Q- sx9mercure ##MSUB -o nco.out # Sortie standard |
---|
[108] | 64 | #-Q- default #!/bin/ksh |
---|
| 65 | #-Q- default ################## |
---|
| 66 | #-Q- default ## DEFAULT HOST ## |
---|
| 67 | #-Q- default ################## |
---|
| 68 | |
---|
| 69 | # $Date: $ |
---|
| 70 | # $Author: $ |
---|
| 71 | # $Revision: $ |
---|
| 72 | # IPSL (2006) |
---|
| 73 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
---|
| 74 | |
---|
| 75 | #set -eu |
---|
| 76 | #set -vx |
---|
| 77 | |
---|
| 78 | date |
---|
| 79 | |
---|
| 80 | #-Q- sx8brodie export OMP_NUM_THREADS=1 |
---|
| 81 | #-Q- aix6 export OMP_NUM_THREADS=1 |
---|
| 82 | |
---|
| 83 | ######################################################################## |
---|
| 84 | |
---|
| 85 | #D- Flag to determine if this job in a standalone mode |
---|
| 86 | #D- Default : value from AA_job if any |
---|
| 87 | StandAlone=${StandAlone:=true} |
---|
| 88 | |
---|
[206] | 89 | #D- Low level debug : to bypass lib test checks and stack construction |
---|
| 90 | #D- Default : value from AA_job if any |
---|
| 91 | libIGCM=${libIGCM:=/path/to/your/libIGCM} |
---|
| 92 | |
---|
| 93 | #D- Directory where files we need to rebuild are store |
---|
| 94 | #D- Default : value from AA_job if any |
---|
| 95 | REBUILD_DIR=${REBUILD_DIR:=/path/to/your/TMP/REBUILD/FILES} |
---|
| 96 | |
---|
| 97 | #D- How many directory to rebuild we have to consider |
---|
| 98 | #D- Default : value from AA_job if any |
---|
| 99 | NbRebuildDir=${NbRebuildDir:=12} |
---|
| 100 | |
---|
| 101 | #D- Suffix date we will use to determine which directory to rebuild |
---|
| 102 | #D- We will rebuild NbRebuildDir before and including PeriodDateBegin |
---|
| 103 | #D- Default : value from AA_job if any |
---|
| 104 | PeriodDateBegin=${PeriodDateBegin:=18901201} |
---|
| 105 | |
---|
[213] | 106 | #D- Name of the job to work in a standalone mode (needed for mask patch) |
---|
| 107 | #D- Default : value from config.card if any |
---|
| 108 | config_UserChoices_JobName=${config_UserChoices_JobName:=name_of_the_job} |
---|
| 109 | |
---|
| 110 | #D- Directory where output data are stored (needed in standalone mode for mask patch ) |
---|
| 111 | #D- Default : value from AA_job if any |
---|
| 112 | R_SAVE=${R_SAVE:=/path/to/your/ARCHIVE/FILES} |
---|
| 113 | |
---|
[108] | 114 | #D- Flag to determine atlas job's output directory |
---|
| 115 | #D- Default : value from libIGCM_post.ksh if any |
---|
| 116 | POST_DIR=${POST_DIR:=${PBS_O_WORKDIR}} |
---|
| 117 | |
---|
| 118 | #D- Increased verbosity (1, 2, 3) |
---|
| 119 | #D- Default : value from AA_job if any |
---|
| 120 | Verbosity=${Verbosity:=3} |
---|
| 121 | |
---|
| 122 | #D- Low level debug : to bypass lib test checks and stack construction |
---|
| 123 | #D- Default : value from AA_job if any |
---|
| 124 | DEBUG_debug=${DEBUG_debug:=false} |
---|
| 125 | |
---|
| 126 | #D- TEMPORARY Flag to determine atmospheric resolution |
---|
| 127 | #D- Default : value from atmospheric driver if any |
---|
[135] | 128 | RESOL_ATM=${RESOL_ATM:=ALL} |
---|
[108] | 129 | |
---|
| 130 | #D- TEMPORARY Flag to determine ocean resolution |
---|
| 131 | #D- Default : value from ocean driver if any |
---|
| 132 | RESOL_OCE=${RESOL_OCE:=ORCA2} |
---|
| 133 | |
---|
| 134 | #D- TEMPORARY Flag to determine ice resolution |
---|
| 135 | #D- Default : value from ice driver if any |
---|
| 136 | RESOL_ICE=${RESOL_ICE:=ORCA2} |
---|
| 137 | |
---|
[178] | 138 | #D- TEMPORARY Flag to determine biogeochemistry resolution |
---|
| 139 | #D- Default : value from ice driver if any |
---|
| 140 | RESOL_MBG=${RESOL_MBG:=ORCA2} |
---|
| 141 | |
---|
[108] | 142 | #D- Flag to determine surface resolution |
---|
| 143 | #D- Default : value from surface driver if any |
---|
[213] | 144 | RESOL_SRF=ALL |
---|
[108] | 145 | |
---|
[213] | 146 | #D- Flag to determine surface resolution |
---|
| 147 | #D- Default : value from surface driver if any |
---|
| 148 | RESOL_SBG=ALL |
---|
[207] | 149 | |
---|
[108] | 150 | ######################################################################## |
---|
| 151 | |
---|
| 152 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
---|
| 153 | ( ${DEBUG_debug} ) && IGCM_debug_Check |
---|
| 154 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
---|
| 155 | ( ${DEBUG_debug} ) && IGCM_card_Check |
---|
| 156 | . ${libIGCM}/libIGCM_date/libIGCM_date.ksh |
---|
| 157 | ( ${DEBUG_debug} ) && IGCM_date_Check |
---|
| 158 | #------- |
---|
| 159 | . ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh |
---|
| 160 | . ${libIGCM}/libIGCM_post/libIGCM_post.ksh |
---|
| 161 | |
---|
| 162 | ######################################################################## |
---|
| 163 | |
---|
| 164 | #set -vx |
---|
| 165 | |
---|
[157] | 166 | RUN_DIR=${RUN_DIR_PATH} |
---|
[202] | 167 | IGCM_sys_MkdirWork ${RUN_DIR} |
---|
| 168 | IGCM_sys_Cd ${RUN_DIR} |
---|
| 169 | # |
---|
[157] | 170 | ListAllRebuildDir=$( IGCM_sys_RshArchive ls -d ${REBUILD_DIR}/REBUILD_* | grep -B $(( ${NbRebuildDir} -1 )) ${PeriodDateBegin} ) |
---|
| 171 | # |
---|
[108] | 172 | |
---|
| 173 | for directory in ${ListAllRebuildDir} ; do |
---|
| 174 | # |
---|
[157] | 175 | IGCM_sys_Get_Dir ${directory} ${RUN_DIR} |
---|
| 176 | # |
---|
[108] | 177 | IGCM_sys_Cd ${RUN_DIR}/$( basename ${directory} ) |
---|
| 178 | |
---|
| 179 | # -------------------------------------------------------------------- |
---|
| 180 | # Source function include in the REBUILD ksh and rebuild |
---|
| 181 | # -------------------------------------------------------------------- |
---|
| 182 | . ${RUN_DIR}/$( basename ${directory} )/rebuild.ksh |
---|
| 183 | IGCM_FlushRebuild |
---|
| 184 | # |
---|
| 185 | IGCM_sys_Cd ${RUN_DIR} |
---|
[147] | 186 | # Clean Up |
---|
[157] | 187 | IGCM_sys_RshArchive rm -rf ${directory} |
---|
[108] | 188 | done |
---|
[203] | 189 | |
---|
| 190 | # Clean RUN_DIR_PATH (necessary for cesium) |
---|
| 191 | IGCM_sys_RmRunDir -Rf ${RUN_DIR_PATH} |
---|