1 | #-Q- platine #!/usr/bin/ksh |
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2 | #-Q- platine ################## |
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3 | #-Q- platine ## PLATINE CEA ## |
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4 | #-Q- platine ################## |
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5 | #-Q- platine #BSUB -J MONITORING # Nom du job |
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6 | #-Q- platine #BSUB -N # message a la fin du job |
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7 | #-Q- platine #BSUB -n 1 # reservation des processeurs pour le job |
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8 | #-Q- platine #BSUB -W 1:00 # Limite temps |
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9 | #-Q- platine #BSUB -q post # Passage en queue post |
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10 | #-Q- sx8brodie #!/bin/ksh |
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11 | #-Q- sx8brodie ####################### |
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12 | #-Q- sx8brodie ## SX8BRODIE IDRIS ## |
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13 | #-Q- sx8brodie ####################### |
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14 | #-Q- sx8brodie # Temps Elapsed max. d'une requete hh:mm:ss |
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15 | #-Q- sx8brodie # @ wall_clock_limit = 20:00:00 |
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16 | #-Q- sx8brodie # Nom du travail LoadLeveler |
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17 | #-Q- sx8brodie # @ job_name = MONITORING |
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18 | #-Q- sx8brodie # Fichier de sortie standard du travail |
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19 | #-Q- sx8brodie # @ output = $(job_name).$(jobid) |
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20 | #-Q- sx8brodie # Fichier de sortie d'erreur du travail |
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21 | #-Q- sx8brodie # @ error = $(job_name).$(jobid) |
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22 | #-Q- sx8brodie # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.) |
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23 | #-Q- sx8brodie # @ notification = error |
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24 | #-Q- sx8brodie # @ environment = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ; $libIGCM_SX ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $MASTER |
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25 | #-Q- sx8brodie # @ queue |
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26 | #-Q- aix6 #!/bin/ksh |
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27 | #-Q- aix6 ####################### |
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28 | #-Q- aix6 ## VARGAS IDRIS ## |
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29 | #-Q- aix6 ####################### |
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30 | #-Q- aix6 # Temps Elapsed max. d'une requete hh:mm:ss |
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31 | #-Q- aix6 # @ wall_clock_limit = 20:00:00 |
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32 | #-Q- aix6 # Nom du travail LoadLeveler |
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33 | #-Q- aix6 # @ job_name = MONITORING |
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34 | #-Q- aix6 # Fichier de sortie standard du travail |
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35 | #-Q- aix6 # @ output = $(job_name).$(jobid) |
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36 | #-Q- aix6 # Fichier de sortie d'erreur du travail |
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37 | #-Q- aix6 # @ error = $(job_name).$(jobid) |
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38 | #-Q- aix6 # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.) |
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39 | #-Q- aix6 # @ notification = error |
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40 | #-Q- aix6 # @ environment = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ; $libIGCM_SX ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $MASTER |
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41 | #-Q- aix6 # @ queue |
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42 | #-Q- sx8mercure #!/bin/ksh |
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43 | #-Q- sx8mercure ###################### |
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44 | #-Q- sx8mercure ## SX8MERCURE CEA ## |
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45 | #-Q- sx8mercure ###################### |
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46 | #-Q- sx8mercure #PBS -N MONITORING # Nom du job |
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47 | #-Q- sx8mercure #PBS -j o # regroupement des stdout et stderr |
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48 | #-Q- sx8mercure #PBS -S /usr/bin/ksh # shell de soumission |
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49 | #-Q- sx8mercure #PBS -l memsz_job=1gb # Limite memoire a 1 Go |
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50 | #-Q- sx8mercure #PBS -l cputim_job=1:00:00 # Limite temps a 2 heures |
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51 | #-Q- sx8mercure #PBS -q scalaire |
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52 | #-Q- sx9mercure #!/bin/ksh |
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53 | #-Q- sx9mercure ###################### |
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54 | #-Q- sx9mercure ## SX9MERCURE CEA ## |
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55 | #-Q- sx9mercure ###################### |
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56 | #-Q- sx9mercure #MSUB -r MONITORING # Nom du job |
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57 | #-Q- sx9mercure #MSUB -N 1 # Reservation du noeud |
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58 | #-Q- sx9mercure #MSUB -n 1 # Reservation du processus |
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59 | #-Q- sx9mercure #MSUB -T 86400 # Limite de temps elapsed du job |
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60 | #-Q- sx9mercure #MSUB -E "-j o" |
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61 | #-Q- sx9mercure #MSUB -E "-S /bin/ksh" |
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62 | #-Q- sx9mercure ##MSUB -e nco.out # Sortie standard |
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63 | #-Q- sx9mercure ##MSUB -o nco.out # Sortie standard |
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64 | #-Q- titane #!/bin/ksh |
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65 | #-Q- titane ###################### |
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66 | #-Q- titane ## TITANE CEA ## |
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67 | #-Q- titane ###################### |
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68 | #-Q- titane #MSUB -r MONITORING # Nom du job |
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69 | #-Q- titane #MSUB -N 1 # Reservation du noeud |
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70 | #-Q- titane #MSUB -n 1 # Reservation du processus |
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71 | #-Q- titane #MSUB -T 86400 # Limite de temps elapsed du job |
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72 | #-Q- titane #MSUB -E "-j o" |
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73 | #-Q- titane #MSUB -E "-S /bin/ksh" |
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74 | #-Q- titane ##MSUB -e nco.out # Sortie standard |
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75 | #-Q- titane ##MSUB -o nco.out # Sortie standard |
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76 | #-Q- default #!/bin/ksh |
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77 | #-Q- default ################## |
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78 | #-Q- default ## DEFAULT HOST ## |
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79 | #-Q- default ################## |
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80 | |
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81 | # $Date$ |
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82 | # $Author$ |
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83 | # $Revision$ |
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84 | # IPSL (2006) |
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85 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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86 | |
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87 | #set -eu |
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88 | #set -vx |
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89 | |
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90 | date |
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91 | |
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92 | #-Q- sx8brodie export OMP_NUM_THREADS=1 |
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93 | #-Q- aix6 export OMP_NUM_THREADS=1 |
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94 | |
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95 | ###################################################################### |
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96 | |
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97 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
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98 | ( ${DEBUG_debug} ) && IGCM_debug_Check |
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99 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
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100 | ( ${DEBUG_debug} ) && IGCM_card_Check |
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101 | . ${libIGCM}/libIGCM_date/libIGCM_date.ksh |
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102 | ( ${DEBUG_debug} ) && IGCM_date_Check |
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103 | #------- |
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104 | . ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh |
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105 | |
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106 | ###################################################################### |
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107 | |
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108 | #set -vx |
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109 | |
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110 | #=========================================== |
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111 | RUN_DIR=${RUN_DIR_PATH} |
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112 | IGCM_sys_MkdirWork ${RUN_DIR} |
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113 | IGCM_sys_Cd ${RUN_DIR} |
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114 | |
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115 | if [ ${StandAlone} = true ] ; then |
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116 | CARD_DIR=${SUBMIT_DIR} |
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117 | else |
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118 | CARD_DIR=${RUN_DIR}/$( basename ${SUBMIT_DIR} ) |
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119 | IGCM_sys_Get_Master ${SUBMIT_DIR} ${RUN_DIR} |
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120 | fi |
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121 | |
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122 | # |
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123 | # First of all |
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124 | # |
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125 | IGCM_card_DefineArrayFromSection ${CARD_DIR}/config.card UserChoices |
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126 | typeset option |
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127 | for option in ${config_UserChoices[*]} ; do |
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128 | IGCM_card_DefineVariableFromOption ${CARD_DIR}/config.card UserChoices ${option} |
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129 | done |
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130 | IGCM_card_DefineArrayFromSection ${CARD_DIR}/config.card ListOfComponents |
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131 | |
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132 | # |
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133 | R_SAVE=${R_OUT}/${config_UserChoices_TagName}/${config_UserChoices_JobName} |
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134 | |
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135 | # |
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136 | IGCM_sys_TestDirArchive ${R_SAVE}/MONITORING |
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137 | if [ $? = 0 ] ; then |
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138 | IGCM_debug_Print 1 "Get MONITORING directory from archive" |
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139 | IGCM_sys_Get_Dir ${R_SAVE}/MONITORING ${RUN_DIR} |
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140 | else |
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141 | IGCM_debug_Print 1 "MONITORING first pass. Nothing has been done before" |
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142 | fi |
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143 | # -------------------------------------------- |
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144 | # Insert your commands between III...III lines |
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145 | # and precise produced directories to save |
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146 | # IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII |
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147 | |
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148 | for comp in ${config_ListOfComponents[*]} ; do |
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149 | IGCM_debug_Print 1 "################## ${comp} ######################" |
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150 | liste_file_monitoring="" |
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151 | IGCM_card_DefineArrayFromOption ${CARD_DIR}/config.card ListOfComponents ${comp} |
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152 | eval compname=\${config_ListOfComponents_${comp}[0]} > /dev/null 2>&1 |
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153 | |
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154 | PATH_monitoring_file="" |
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155 | eval monitoring_file=monitoring01_${compname}_\${RESOL_${comp}}.cfg > /dev/null 2>&1 |
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156 | if [[ -d ${CARD_DIR}/POST && -f ${CARD_DIR}/POST/monitoring01_${compname}.cfg ]] ; then |
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157 | PATH_monitoring_file=${CARD_DIR}/POST/${monitoring_file} |
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158 | elif [ -f ${FER_ATLAS}/${monitoring_file} ] ; then |
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159 | PATH_monitoring_file=${FER_ATLAS}/${monitoring_file} |
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160 | else |
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161 | IGCM_debug_Print 1 "No monitoring file found for this component. Was expecting ${monitoring_file}" |
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162 | IGCM_debug_Print 1 "Step to next component" |
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163 | continue |
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164 | fi |
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165 | # |
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166 | if [ X${PATH_monitoring_file} != X"" ] ; then |
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167 | IGCM_debug_Print 1 "Monitoring file used : ${PATH_monitoring_file}" |
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168 | IGCM_debug_Print 1 "Determine which files we need." |
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169 | . monitoring01 -l2 --listcommand 'IGCM_sys_RshArchive ls' ${PATH_monitoring_file} ${R_SAVE}/${comp}/Analyse/TS_MO |
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170 | liste_file_monitoring=$( . monitoring01 -q -l2 --listcommand 'IGCM_sys_RshArchive ls' ${PATH_monitoring_file} ${R_SAVE}/${comp}/Analyse/TS_MO ) |
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171 | fi |
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172 | # |
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173 | if [ ! "X${liste_file_monitoring}" = X ] ; then |
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174 | IGCM_sys_Get /l liste_file_monitoring ${RUN_DIR} |
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175 | IGCM_debug_Print 1 "monitoring01 -c ${CARD_DIR} -p ${comp} --time -t \"${config_UserChoices_JobName} monitoring\" -o ${RUN_DIR}/MONITORING ${PATH_monitoring_file} ." |
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176 | IGCM_debug_Print 1 "monitoring01 starts ................................................." |
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177 | monitoring01 -c ${CARD_DIR} -p ${comp} --time -t "${config_UserChoices_JobName} monitoring" -o ${RUN_DIR}/MONITORING ${PATH_monitoring_file} . |
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178 | else |
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179 | IGCM_debug_Print 1 "No time series detected by this command :" |
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180 | IGCM_debug_Print 1 "monitoring01 -l2 --listcommand 'IGCM_sys_RshArchive ls' ${PATH_monitoring_file} ${R_SAVE}/${comp}/Analyse/TS_MO" |
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181 | . monitoring01 -l2 --listcommand 'IGCM_sys_RshArchive ls' ${PATH_monitoring_file} ${R_SAVE}/${comp}/Analyse/TS_MO |
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182 | fi |
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183 | # |
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184 | done |
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185 | |
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186 | # IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII |
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187 | |
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188 | # Save files |
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189 | IGCM_sys_Put_Dir MONITORING ${R_SAVE} |
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190 | |
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191 | # Dods copy |
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192 | IGCM_sys_Put_Dods MONITORING |
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193 | |
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194 | # Clean RUN_DIR_PATH (necessary for cesium) |
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195 | IGCM_sys_RmRunDir -Rf ${RUN_DIR_PATH} |
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