source: trunk/libIGCM/AA_metrics_LMDZ @ 1192

Last change on this file since 1192 was 1192, checked in by sdipsl, 9 years ago

Bugfix caused by r1189 side effect. On Curie job begins their execution in the directory they have submitted under (this directory is very likely to have been removed). Change directory before doing anything to avoid stale file handle error.
  • Property svn:keywords set to Revision Author Date
File size: 7.3 KB
Line 
1#-Q- curie ######################
2#-Q- curie ## CURIE   TGCC/CEA ##
3#-Q- curie ######################
4#-Q- curie #MSUB -r METRICS_LMDZ       # Nom du job
5#-Q- curie #MSUB -eo
6#-Q- curie #MSUB -n 1              # Reservation du processus
7#-Q- curie #MSUB -T 14400          # Limite de temps elapsed du job
8#-Q- curie #MSUB -q ::default_node::
9#-Q- curie #MSUB -Q normal
10#-Q- curie #MSUB -A ::default_project::
11#-Q- curie set +x
12#-Q- ada #!/bin/ksh
13#-Q- ada #######################
14#-Q- ada ## ADA         IDRIS ##
15#-Q- ada #######################
16#-Q- ada # @ job_type = serial
17#-Q- ada # @ requirements = (Feature == "prepost")
18#-Q- ada # Temps Elapsed max. d'une requete hh:mm:ss
19#-Q- ada # @ wall_clock_limit = 4:00:00
20#-Q- ada # Nom du travail LoadLeveler
21#-Q- ada # @ job_name   = METRICS_LMDZ
22#-Q- ada # Fichier de sortie standard du travail
23#-Q- ada # @ output     = $(job_name).$(jobid)
24#-Q- ada # Fichier de sortie d'erreur du travail
25#-Q- ada # @ error      =  $(job_name).$(jobid)
26#-Q- ada # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.)
27#-Q- ada # @ notification = error
28#-Q- ada # @ environment  = $POST_DIR ; $Script_Post_Output ; $SUBMIT_DIR ; $libIGCM ; $DEBUG_debug ; $BigBrother ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $RESOL_SBG ; $YEARS ; $DIR_OUT ; $MASTER ; $libIGCM_SX
29#-Q- ada # @ queue
30#-Q- lxiv8 ######################
31#-Q- lxiv8 ## OBELIX      LSCE ##
32#-Q- lxiv8 ######################
33#-Q- lxiv8 #PBS -N METRICS_LMDZ
34#-Q- lxiv8 #PBS -m a
35#-Q- lxiv8 #PBS -j oe
36#-Q- lxiv8 #PBS -q test
37#-Q- lxiv8 #PBS -o METRICS_LMDZ.$$
38#-Q- lxiv8 #PBS -S /bin/ksh
39#-Q- ifort_CICLAD ######################
40#-Q- ifort_CICLAD ##   CICLAD    IPSL ##
41#-Q- ifort_CICLAD ######################
42#-Q- ifort_CICLAD #PBS -N METRICS_LMDZ
43#-Q- ifort_CICLAD #PBS -m a
44#-Q- ifort_CICLAD #PBS -j oe
45#-Q- ifort_CICLAD #PBS -q std
46#-Q- ifort_CICLAD #PBS -S /bin/ksh
47#-Q- default #!/bin/ksh
48#-Q- default ##################
49#-Q- default ## DEFAULT HOST ##
50#-Q- default ##################
51
52#**************************************************************
53# Author: Sebastien Denvil
54# Contact: Sebastien.Denvil__at__ipsl.jussieu.fr
55# $Revision::                                          $ Revision of last commit
56# $Author::                                            $ Author of last commit
57# $Date::                                              $ Date of last commit
58# IPSL (2006)
59#  This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC
60#
61#**************************************************************
62
63#set -eu
64#set -vx
65
66date
67
68#-Q- ada export OMP_NUM_THREADS=1
69
70#D- Task type (computing or post-processing)
71TaskType=post-processing
72
73######################################################################
74
75. ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh
76. ${libIGCM}/libIGCM_card/libIGCM_card.ksh
77. ${libIGCM}/libIGCM_date/libIGCM_date.ksh
78#-------
79. ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh
80. ${libIGCM}/libIGCM_config/libIGCM_config.ksh
81. ${libIGCM}/libIGCM_comp/libIGCM_comp.ksh
82#-------
83IGCM_sys_MkdirWork ${RUN_DIR_PATH}
84IGCM_sys_Cd ${RUN_DIR_PATH}
85#-------
86( ${DEBUG_debug} ) && IGCM_debug_Check
87( ${DEBUG_debug} ) && IGCM_card_Check
88( ${DEBUG_debug} ) && IGCM_date_Check
89
90######################################################################
91
92#set -vx
93
94# ------------------------------------------------------------------
95# Test if all was right before proceeding further
96# ------------------------------------------------------------------
97IGCM_debug_Verif_Exit_Post
98
99if [ ${StandAlone} = true ] ; then
100    CARD_DIR=${SUBMIT_DIR}
101else
102    CARD_DIR=${RUN_DIR_PATH}
103    IGCM_sys_Get_Master ${SUBMIT_DIR}/config.card ${RUN_DIR_PATH}
104    IGCM_sys_Get_Master ${SUBMIT_DIR}/run.card    ${RUN_DIR_PATH}
105    IGCM_sys_Get_Master ${SUBMIT_DIR}/COMP        ${RUN_DIR_PATH}
106    IGCM_sys_Get_Master ${SUBMIT_DIR}/POST        ${RUN_DIR_PATH}
107fi
108
109#==================================
110# First of all
111#
112# Read libIGCM compatibility version in config.card
113# Read UserChoices section
114# Read Ensemble section
115# Read Post section
116# Define all netcdf output directories
117#==================================
118IGCM_config_CommonConfiguration ${CARD_DIR}/config.card
119
120# ------------------------------------------------------------------
121# Activate BigBrother so as to supervise this job
122# ------------------------------------------------------------------
123IGCM_debug_BigBro_Initialize
124
125#==================================
126# Then set up several directories
127#==================================
128R_METRICS=METRICS/SE_${YEARS}
129R_OUT_ATM=${R_SAVE}/ATM
130DIR_OUT=${DIR_OUT:=SE}
131RUN_DIR=${RUN_DIR_PATH}/METRICS_LMDZ_${YEARS}
132IGCM_sys_MkdirArchive ${R_FIGR}
133IGCM_sys_MkdirWork ${RUN_DIR}
134IGCM_sys_Cd ${RUN_DIR}
135IGCM_sys_MkdirWork METRICS
136
137#==================================
138# Get the file
139#==================================
140IGCM_sys_Get ${R_OUT_ATM}/Analyse/${DIR_OUT}/${config_UserChoices_JobName}_SE_${YEARS}_1M_histmth.nc ${RUN_DIR}
141
142#==================================
143# SET UP THE PATH (will be done in libIGCM_sys later)
144#==================================
145export PATH=${PCMDI_MP}/work_install_v2/PCMDI_METRICS/bin:${PATH}
146
147#==================================
148# Appropriate configuration
149#==================================
150IGCM_sys_Cp ${PCMDI_MP}/work_install_v2.11/PCMDI_METRICS/doc/parameter_files/input_parameters_LMDZ_PCMDI_template.py template.py
151
152#==================================
153# Configure template
154#==================================
155IGCM_comp_modifyFile template.py path_and_filename \'./${config_UserChoices_JobName}_SE_${YEARS}_1M_histmth.nc\'
156IGCM_comp_modifyFile template.py filename \'${config_UserChoices_JobName}_SE_${YEARS}_1M_histmth.nc\'
157IGCM_comp_modifyFile template.py attributes_provided \'IPSL_Extended\'
158IGCM_comp_modifyFile template.py Login  \'${LOGIN}\'
159IGCM_comp_modifyFile template.py model_versions \'\[${config_UserChoices_TagName}\]\'
160IGCM_comp_modifyFile template.py experiment  \'${config_UserChoices_ExperimentName}\'
161IGCM_comp_modifyFile template.py realization \'${config_UserChoices_JobName}\'
162IGCM_comp_modifyFile template.py project_id \'IPSL-${config_UserChoices_SpaceName}\'
163IGCM_comp_modifyFile template.py ModelFreeSpace \'${config_UserChoices_LongName}\'
164IGCM_comp_modifyFile template.py case_id \'SE_${YEARS}\'
165IGCM_comp_modifyFile template.py obs_data_path  \'${PCMDI_MP}/references-for-metrics/obs\'
166IGCM_comp_modifyFile template.py metrics_output_path \'${RUN_DIR}/METRICS\'
167IGCM_comp_modifyFile template.py model_clims_interpolated_output \'${RUN_DIR}\'
168
169#==================================
170# Compute metrics
171#==================================
172python ${PCMDI_MP}/work_install_v2.11/PCMDI_METRICS/bin/pcmdi_metrics_driver.py -p template.py
173
174#==================================
175# Export metrics to prodiguer system
176#==================================
177IGCM_debug_sendAMQP_Metrics METRICS/SE_${YEARS}
178
179#==================================
180# Save files
181#==================================
182IGCM_sys_Put_Dir METRICS ${R_FIGR}
183IGCM_sys_Rm -Rf METRICS
184IGCM_sys_Rm ${config_UserChoices_JobName}_SE_${YEARS}_1M_histmth.nc
185
186# Clean RUN_DIR_PATH (necessary for cesium and titane only)
187IGCM_sys_RmRunDir -Rf ${RUN_DIR_PATH}
188
189# ------------------------------------------------------------------
190# Finalize BigBrother to inform that the jobs end
191# ------------------------------------------------------------------
192IGCM_debug_BigBro_Finalize
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