[2] | 1 | #-Q- platine #!/usr/bin/ksh |
---|
| 2 | #-Q- platine ################## |
---|
| 3 | #-Q- platine ## PLATINE CEA ## |
---|
| 4 | #-Q- platine ################## |
---|
| 5 | #-Q- platine #BSUB -J TS # Nom du job |
---|
| 6 | #-Q- platine #BSUB -N # message a la fin du job |
---|
| 7 | #-Q- platine #BSUB -n 1 # reservation des processeurs pour le job |
---|
| 8 | #-Q- platine #BSUB -W 1:00 # Limite temps |
---|
[149] | 9 | #-Q- platine #BSUB -q post # Passage en queue post |
---|
[59] | 10 | #-Q- sx8brodie #!/bin/ksh |
---|
[2] | 11 | #-Q- sx8brodie ####################### |
---|
| 12 | #-Q- sx8brodie ## SX8BRODIE IDRIS ## |
---|
| 13 | #-Q- sx8brodie ####################### |
---|
[58] | 14 | #-Q- sx8brodie # Temps Elapsed max. d'une requete hh:mm:ss |
---|
| 15 | #-Q- sx8brodie # @ wall_clock_limit = 10:00:00 |
---|
| 16 | #-Q- sx8brodie # Nom du travail LoadLeveler |
---|
[62] | 17 | #-Q- sx8brodie # @ job_name = TS |
---|
[58] | 18 | #-Q- sx8brodie # Fichier de sortie standard du travail |
---|
| 19 | #-Q- sx8brodie # @ output = $(job_name).$(jobid) |
---|
| 20 | #-Q- sx8brodie # Fichier de sortie d'erreur du travail |
---|
| 21 | #-Q- sx8brodie # @ error = $(job_name).$(jobid) |
---|
| 22 | #-Q- sx8brodie # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.) |
---|
| 23 | #-Q- sx8brodie # @ notification = error |
---|
[178] | 24 | #-Q- sx8brodie # @ environment = $DEBUG_debug ; $MODIPSL ; $libIGCM ; $libIGCM_SX ; $SUBMIT_DIR ; $REBUILD_DIR ; $RebuildFromArchive ; $POST_DIR ; $MASTER ; $RebuildFrequency ; $PeriodDateBegin ; $PeriodDateEnd ; $NbRebuildDir ; $StandAlone ; $CompletedFlag ; $TsTask ; $CompToRead ; $FlagToRead ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $RESOL_BIOS ; $MASTER |
---|
[68] | 25 | #-Q- aix6 #!/bin/ksh |
---|
| 26 | #-Q- aix6 ####################### |
---|
| 27 | #-Q- aix6 ## VARGAS IDRIS ## |
---|
| 28 | #-Q- aix6 ####################### |
---|
| 29 | #-Q- aix6 # Temps Elapsed max. d'une requete hh:mm:ss |
---|
| 30 | #-Q- aix6 # @ wall_clock_limit = 10:00:00 |
---|
| 31 | #-Q- aix6 # Nom du travail LoadLeveler |
---|
[78] | 32 | #-Q- aix6 # @ job_name = TS |
---|
[68] | 33 | #-Q- aix6 # Fichier de sortie standard du travail |
---|
| 34 | #-Q- aix6 # @ output = $(job_name).$(jobid) |
---|
| 35 | #-Q- aix6 # Fichier de sortie d'erreur du travail |
---|
| 36 | #-Q- aix6 # @ error = $(job_name).$(jobid) |
---|
| 37 | #-Q- aix6 # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.) |
---|
| 38 | #-Q- aix6 # @ notification = error |
---|
[178] | 39 | #-Q- aix6 # @ environment = $DEBUG_debug ; $MODIPSL ; $libIGCM ; $libIGCM_SX ; $SUBMIT_DIR ; $REBUILD_DIR ; $RebuildFromArchive ; $POST_DIR ; $MASTER ; $RebuildFrequency ; $DateBegin ; $PeriodDateBegin ; $PeriodDateEnd ; $NbRebuildDir ; $StandAlone ; $CompletedFlag ; $TsTask ; $CompToRead ; $FlagToRead ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $RESOL_BIOS ; $MASTER |
---|
[68] | 40 | #-Q- aix6 # @ queue |
---|
[58] | 41 | #-Q- sx8brodie # @ queue |
---|
[2] | 42 | #-Q- sx8mercure #!/bin/ksh |
---|
| 43 | #-Q- sx8mercure ###################### |
---|
| 44 | #-Q- sx8mercure ## SX8MERCURE CEA ## |
---|
| 45 | #-Q- sx8mercure ###################### |
---|
| 46 | #-Q- sx8mercure #PBS -N TS # Nom du job |
---|
| 47 | #-Q- sx8mercure #PBS -j o # regroupement des stdout et stderr |
---|
| 48 | #-Q- sx8mercure #PBS -S /usr/bin/ksh # shell de soumission |
---|
| 49 | #-Q- sx8mercure #PBS -l memsz_job=1gb # Limite memoire a 1 Go |
---|
[189] | 50 | #-Q- sx8mercure #PBS -l cputim_job=24:00:00 # Limite temps a 2 heures |
---|
[2] | 51 | #-Q- sx8mercure #PBS -q scalaire |
---|
[172] | 52 | #-Q- sx9mercure #!/bin/ksh |
---|
| 53 | #-Q- sx9mercure ###################### |
---|
| 54 | #-Q- sx9mercure ## SX9MERCURE CEA ## |
---|
| 55 | #-Q- sx9mercure ###################### |
---|
| 56 | #-Q- sx9mercure #PBS -N TS # Nom du job |
---|
| 57 | #-Q- sx9mercure #PBS -j o # regroupement des stdout et stderr |
---|
| 58 | #-Q- sx9mercure #PBS -S /usr/bin/ksh # shell de soumission |
---|
| 59 | #-Q- sx9mercure #PBS -l memsz_job=1gb # Limite memoire a 1 Go |
---|
[189] | 60 | #-Q- sx9mercure #PBS -l cputim_job=24:00:00 # Limite temps a 2 heures |
---|
[172] | 61 | #-Q- sx9mercure #PBS -q scalaire |
---|
[2] | 62 | #-Q- default #!/bin/ksh |
---|
| 63 | #-Q- default ################## |
---|
| 64 | #-Q- default ## DEFAULT HOST ## |
---|
| 65 | #-Q- default ################## |
---|
| 66 | |
---|
[108] | 67 | # $Date$ |
---|
| 68 | # $Author$ |
---|
| 69 | # $Revision$ |
---|
| 70 | # IPSL (2006) |
---|
| 71 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
---|
| 72 | |
---|
| 73 | #set -eu |
---|
[2] | 74 | #set -vx |
---|
| 75 | |
---|
| 76 | date |
---|
| 77 | |
---|
| 78 | #-Q- sx8brodie export OMP_NUM_THREADS=1 |
---|
[108] | 79 | #-Q- aix6 export OMP_NUM_THREADS=1 |
---|
[2] | 80 | |
---|
| 81 | ######################################################################## |
---|
| 82 | |
---|
| 83 | #D- Flag to determine if this job in a standalone mode |
---|
| 84 | #D- Default : value from AA_job if any |
---|
| 85 | StandAlone=${StandAlone:=true} |
---|
| 86 | |
---|
[135] | 87 | #D- Flag to determine allready produced time series. |
---|
| 88 | #D- Default : Commented. Uncomment for StandAlone case if you want to continue a time series |
---|
| 89 | #CompletedFlag= |
---|
| 90 | |
---|
[2] | 91 | #D- Flag to determine job's output directory |
---|
| 92 | #D- Default : value from libIGCM_post.ksh if any |
---|
| 93 | POST_DIR=${POST_DIR:=${PBS_O_WORKDIR}} |
---|
| 94 | |
---|
| 95 | #D- Increased verbosity (1, 2, 3) |
---|
| 96 | #D- Default : value from AA_job if any |
---|
| 97 | Verbosity=${Verbosity:=3} |
---|
| 98 | |
---|
| 99 | #D- Low level debug : to bypass lib test checks and stack construction |
---|
| 100 | #D- Default : value from AA_job if any |
---|
| 101 | DEBUG_debug=${DEBUG_debug:=false} |
---|
| 102 | |
---|
| 103 | #D- Low level debug : to bypass lib test checks and stack construction |
---|
| 104 | #D- Default : value from AA_job if any |
---|
[108] | 105 | libIGCM=${libIGCM:=/path/to/your/libIGCM} |
---|
[2] | 106 | |
---|
| 107 | #D- TEMPORARY Flag to determine atmospheric resolution |
---|
| 108 | #D- Default : value from atmospheric driver if any |
---|
[149] | 109 | RESOL_ATM=ALL |
---|
[2] | 110 | |
---|
| 111 | #D- TEMPORARY Flag to determine ocean resolution |
---|
| 112 | #D- Default : value from ocean driver if any |
---|
| 113 | RESOL_OCE=${RESOL_OCE:=ORCA2} |
---|
| 114 | |
---|
| 115 | #D- TEMPORARY Flag to determine ice resolution |
---|
| 116 | #D- Default : value from ice driver if any |
---|
| 117 | RESOL_ICE=${RESOL_ICE:=ORCA2} |
---|
| 118 | |
---|
[178] | 119 | #D- TEMPORARY Flag to determine marine biogeochemistry resolution |
---|
| 120 | #D- Default : value from ice driver if any |
---|
| 121 | RESOL_MBG=${RESOL_MBG:=ORCA2} |
---|
| 122 | |
---|
[2] | 123 | #D- Flag to determine surface resolution |
---|
| 124 | #D- Default : value from surface driver if any |
---|
[149] | 125 | RESOL_SRF=ALL |
---|
[2] | 126 | |
---|
[175] | 127 | #D- Flag to determine surface resolution |
---|
| 128 | #D- Default : value from surface driver if any |
---|
| 129 | RESOL_BIOS=ALL |
---|
| 130 | |
---|
[2] | 131 | ######################################################################## |
---|
| 132 | |
---|
[108] | 133 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
---|
| 134 | ( ${DEBUG_debug} ) && IGCM_debug_Check |
---|
| 135 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
---|
| 136 | ( ${DEBUG_debug} ) && IGCM_card_Check |
---|
| 137 | . ${libIGCM}/libIGCM_date/libIGCM_date.ksh |
---|
| 138 | ( ${DEBUG_debug} ) && IGCM_date_Check |
---|
| 139 | #------- |
---|
| 140 | . ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh |
---|
[2] | 141 | |
---|
| 142 | ######################################################################## |
---|
| 143 | |
---|
| 144 | #set -vx |
---|
| 145 | |
---|
| 146 | # Useful cleaning function |
---|
| 147 | MENAGE () |
---|
[81] | 148 | { |
---|
| 149 | [ -f $3 ] && ( IGCM_sys_RshArchive rm -f $1/$2 ;) |
---|
[2] | 150 | } |
---|
| 151 | |
---|
| 152 | ######################################################################## |
---|
| 153 | |
---|
| 154 | if [ ${DEBUG_debug} = true ] ; then |
---|
| 155 | IGCM_sys_MkdirWork ${RUN_DIR_PATH} |
---|
| 156 | echo "RUN_DIR_PATH ${RUN_DIR_PATH} ok." |
---|
| 157 | fi |
---|
| 158 | IGCM_sys_Cd ${RUN_DIR_PATH} |
---|
| 159 | |
---|
| 160 | if [ ${StandAlone} = true ] ; then |
---|
| 161 | CARD_DIR=${SUBMIT_DIR} |
---|
| 162 | else |
---|
| 163 | CARD_DIR=${RUN_DIR_PATH}/$( basename ${SUBMIT_DIR} ) |
---|
| 164 | IGCM_sys_Get_Master ${SUBMIT_DIR} ${RUN_DIR_PATH} |
---|
| 165 | fi |
---|
| 166 | |
---|
| 167 | # |
---|
| 168 | # First of all |
---|
| 169 | # |
---|
| 170 | IGCM_card_DefineArrayFromSection ${CARD_DIR}/config.card UserChoices |
---|
| 171 | typeset option |
---|
| 172 | for option in ${config_UserChoices[*]} ; do |
---|
| 173 | IGCM_card_DefineVariableFromOption ${CARD_DIR}/config.card UserChoices ${option} |
---|
| 174 | done |
---|
| 175 | # |
---|
| 176 | echo |
---|
| 177 | IGCM_debug_Print 1 "DefineArrayFromOption : config_UserChoices" |
---|
| 178 | IGCM_debug_PrintVariables 3 config_UserChoices_JobName |
---|
| 179 | IGCM_debug_PrintVariables 3 config_UserChoices_LongName |
---|
| 180 | IGCM_debug_PrintVariables 3 config_UserChoices_TagName |
---|
| 181 | IGCM_debug_PrintVariables 3 config_UserChoices_CalendarType |
---|
| 182 | IGCM_debug_PrintVariables 3 config_UserChoices_DateBegin |
---|
| 183 | IGCM_debug_PrintVariables 3 config_UserChoices_DateEnd |
---|
| 184 | IGCM_debug_PrintVariables 3 config_UserChoices_PeriodLength |
---|
| 185 | echo |
---|
| 186 | |
---|
| 187 | #================================== |
---|
| 188 | R_SAVE=${R_OUT}/${config_UserChoices_TagName}/${config_UserChoices_JobName} |
---|
| 189 | # |
---|
[149] | 190 | # Determine component to take care of depending on kind of task create_ts will perform |
---|
[2] | 191 | # |
---|
[149] | 192 | ( [ X${TsTask} = XChunck2D ] || [ X${TsTask} = XChunck3D ] ) && set -A config_ListOfComponents ${CompToRead} || IGCM_card_DefineArrayFromSection ${CARD_DIR}/config.card ListOfComponents |
---|
[2] | 193 | # |
---|
[149] | 194 | # Determine period for time series. Default : value from AA_job or from launch_TS if any |
---|
| 195 | # |
---|
[2] | 196 | DateBegin=${DateBegin:=$( IGCM_date_ConvertFormatToGregorian ${config_UserChoices_DateBegin} )} |
---|
| 197 | # |
---|
| 198 | PeriodDateEnd=${PeriodDateEnd:=$( IGCM_date_ConvertFormatToGregorian ${config_UserChoices_DateEnd} )} |
---|
[149] | 199 | # |
---|
| 200 | # Determine Dimension of the produced time series : 2D or 3D |
---|
| 201 | if ( [ X${TsTask} = XChunck2D ] || [ X${TsTask} = X2D ] ) ; then |
---|
| 202 | Dimension=2D |
---|
| 203 | elif ( [ X${TsTask} = XChunck3D ] || [ X${TsTask} = X3D ] ) ; then |
---|
| 204 | Dimension=3D |
---|
| 205 | else |
---|
| 206 | Dimension="" |
---|
| 207 | fi |
---|
[2] | 208 | |
---|
[149] | 209 | |
---|
[2] | 210 | ######################################################################## |
---|
| 211 | # |
---|
| 212 | # Depending on requested time series fill following variables : |
---|
| 213 | # |
---|
| 214 | # - LISTE_FILE_${comp}[*] |
---|
| 215 | # - LISTE_VARS_${file}[*] |
---|
| 216 | # - LISTE_AXIS_${file}[*] |
---|
| 217 | # - LISTE_PATCH_${file}[*] |
---|
| 218 | ######################################################################## |
---|
| 219 | |
---|
| 220 | # |
---|
| 221 | # For each selected component determine which files need post-processing |
---|
| 222 | # |
---|
| 223 | DoJob=false |
---|
| 224 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 225 | # |
---|
| 226 | ActiveComp=false |
---|
| 227 | # |
---|
| 228 | IGCM_card_DefineArrayFromOption ${CARD_DIR}/config.card ListOfComponents ${comp} |
---|
| 229 | eval compname=\${config_ListOfComponents_${comp}[0]} > /dev/null 2>&1 |
---|
| 230 | # |
---|
| 231 | card=${CARD_DIR}/COMP/${compname}.card |
---|
[149] | 232 | |
---|
[2] | 233 | IGCM_card_DefineArrayFromOption ${card} OutputFiles List |
---|
| 234 | # |
---|
| 235 | ListFilesName=${compname}_OutputFiles_List |
---|
| 236 | eval FileName0=\${${ListFilesName}[0]} > /dev/null 2>&1 |
---|
| 237 | # |
---|
| 238 | if [ X${FileName0} != X${NULL_STR} ] ; then |
---|
| 239 | # |
---|
| 240 | #IGCM_debug_Print 1 "Component : ${compname}" |
---|
| 241 | # |
---|
| 242 | # INITIALISATION |
---|
| 243 | # |
---|
[149] | 244 | typeset i |
---|
| 245 | if ( [ X${TsTask} = XChunck2D ] || [ X${TsTask} = XChunck3D ] ) ; then |
---|
| 246 | ((NbFiles=${FlagToRead})) |
---|
| 247 | ((i=${NbFiles}-2)) |
---|
| 248 | else |
---|
| 249 | eval NbFiles=\${#${ListFilesName}[@]} > /dev/null 2>&1 |
---|
| 250 | i=0 |
---|
| 251 | fi |
---|
[2] | 252 | # |
---|
[149] | 253 | until [ $i -ge $NbFiles ]; do |
---|
[2] | 254 | # |
---|
[149] | 255 | (( i_ = i+2 )) |
---|
[2] | 256 | eval flag_post_=\${${ListFilesName}[$i_]} > /dev/null 2>&1 |
---|
| 257 | eval flag_post=${flag_post_} |
---|
| 258 | # |
---|
| 259 | if [ X${flag_post} != XNONE ] ; then |
---|
| 260 | # |
---|
[149] | 261 | # For each comp and each file who needs post-processing |
---|
| 262 | # determine which variables need time series. |
---|
| 263 | # |
---|
| 264 | FILE=$( echo ${flag_post} | awk "-FPost_" '{print $2}' ) |
---|
| 265 | IGCM_card_DefineArrayFromOption ${card} Post_${FILE} TimeSeriesVars${Dimension} |
---|
| 266 | # |
---|
| 267 | if [ $( eval echo \${${compname}_Post_${FILE}_TimeSeriesVars${Dimension}} ) = ${NULL_STR} ] ; then |
---|
| 268 | # |
---|
| 269 | IGCM_debug_Print 3 "Nothing to do for ${FILE} according to ${card}" |
---|
| 270 | (( i=i+3 )) |
---|
| 271 | continue |
---|
| 272 | # |
---|
| 273 | fi |
---|
[2] | 274 | # |
---|
[149] | 275 | # If we are not a Chunck type task, skip files/variables handled by chunck task |
---|
| 276 | # |
---|
[189] | 277 | if ( [ ! X${TsTask} = XChunck${Dimension} ] && [ ! X${TsTask} = X ] && [ ! XChunck${Dimension} = XChunck ] ) ; then |
---|
[149] | 278 | IGCM_card_DefineVariableFromOption ${card} Post_${FILE} ChunckJob${Dimension} |
---|
| 279 | if [ ! $( eval echo \${${compname}_Post_${FILE}_ChunckJob${Dimension}} ) = NONE ] ; then |
---|
| 280 | IGCM_debug_Print 3 "Nothing to do for ${FILE} TimeSeriesVars${Dimension} according to ${card}" |
---|
| 281 | IGCM_debug_Print 3 "Let another chunck task do the job $( eval echo \${${compname}_Post_${FILE}_ChunckJob${Dimension}} )" |
---|
| 282 | (( i=i+3 )) |
---|
| 283 | continue |
---|
| 284 | fi |
---|
| 285 | fi |
---|
| 286 | # |
---|
| 287 | # We need coordinates axis to properly fill produced time series |
---|
| 288 | # |
---|
| 289 | IGCM_card_DefineArrayFromOption ${card} Post_${FILE} GatherWithInternal |
---|
| 290 | # |
---|
| 291 | if [ $( eval echo \${${compname}_Post_${FILE}_GatherWithInternal} ) = ${NULL_STR} ] ; then |
---|
| 292 | # |
---|
| 293 | IGCM_debug_Print 1 "ERROR !! We miss coordinate axis for ${FILE} according to ${card}" |
---|
| 294 | IGCM_debug_Print 1 "So no time series will be produced for ${FILE} !!" |
---|
| 295 | (( i=i+3 )) |
---|
| 296 | continue |
---|
| 297 | # |
---|
| 298 | fi |
---|
| 299 | # |
---|
| 300 | # We need LIST of variables not allready produced (useful for standalone mode) |
---|
| 301 | # |
---|
| 302 | FlagDir=$( echo ${FILE} | awk -F "_" '{print $1}' ) |
---|
| 303 | case ${FlagDir} in |
---|
| 304 | *Y) TS_Dir=TS_YE ;; |
---|
| 305 | *M) TS_Dir=TS_MO ;; |
---|
| 306 | *D) TS_Dir=TS_DA ;; |
---|
| 307 | HF) TS_Dir=TS_HF ;; |
---|
| 308 | INS) TS_Dir=TS_INS ;; |
---|
| 309 | esac |
---|
| 310 | # |
---|
| 311 | count=0 |
---|
| 312 | for var in $( eval echo \${${compname}_Post_${FILE}_TimeSeriesVars${Dimension}[*]} ) ; do |
---|
| 313 | # |
---|
| 314 | DIRECTORY=${R_SAVE}/${comp}/Analyse/${TS_Dir} |
---|
| 315 | TestedFile=${config_UserChoices_JobName}_${DateBegin}_${PeriodDateEnd}_${FlagDir}_${var}.nc |
---|
| 316 | # |
---|
| 317 | IGCM_sys_TestFileArchive ${DIRECTORY}/${TestedFile} |
---|
| 318 | if [ ! $? = 0 ] ; then |
---|
| 319 | eval set +A LISTE_VARS_${FILE} \${LISTE_VARS_${FILE}[*]} ${var} |
---|
| 320 | ActiveComp=true |
---|
| 321 | (( count = count + 1 )) |
---|
| 322 | fi |
---|
| 323 | done |
---|
| 324 | # |
---|
| 325 | if [ ${count} -gt 0 ] ; then |
---|
| 326 | # |
---|
| 327 | eval set +A LISTE_FILE_${comp} \${LISTE_FILE_${comp}[*]} ${FILE} |
---|
| 328 | eval set +A LISTE_AXIS_${FILE} \${${compname}_Post_${FILE}_GatherWithInternal[*]} |
---|
| 329 | # |
---|
[168] | 330 | if [ ! X${RebuildFrequency} = Xtrue ] ; then |
---|
[149] | 331 | IGCM_card_DefineArrayFromOption ${card} Post_${FILE} Patches |
---|
| 332 | eval set +A LISTE_PATCHES_${FILE} \${${compname}_Post_${FILE}_Patches[*]} |
---|
| 333 | if [ X$( eval echo \${LISTE_PATCHES_${FILE}[0]} ) != X${NULL_STR} ]; then |
---|
| 334 | for Patch in $( eval echo \${LISTE_PATCHES_${FILE}[*]} ); do |
---|
| 335 | if [ Xload${Patch} != X ] ; then |
---|
| 336 | . ${libIGCM}/libIGCM_post/IGCM_${Patch}.ksh |
---|
| 337 | eval load${Patch}=loaded |
---|
| 338 | fi |
---|
| 339 | done |
---|
| 340 | fi |
---|
| 341 | fi |
---|
| 342 | fi |
---|
[2] | 343 | fi |
---|
[149] | 344 | (( i=i+3 )) |
---|
[2] | 345 | done |
---|
| 346 | fi |
---|
[149] | 347 | # |
---|
[2] | 348 | if [ ${ActiveComp} = true ] ; then |
---|
| 349 | set +A ActiveListOfComponents ${ActiveListOfComponents[*]} ${comp} |
---|
| 350 | fi |
---|
| 351 | done |
---|
| 352 | |
---|
| 353 | set -A config_ListOfComponents ${ActiveListOfComponents[*]} |
---|
| 354 | [ ! -z "${ActiveListOfComponents}" ] && DoJob=true |
---|
| 355 | |
---|
| 356 | ######################################################################## |
---|
| 357 | # |
---|
| 358 | # DEFINE DATE FUNCTIONS |
---|
| 359 | # |
---|
| 360 | ######################################################################## |
---|
| 361 | |
---|
| 362 | # Give the end of the next $1 period from $2 date |
---|
| 363 | function create_ts_next_date { |
---|
| 364 | IGCM_debug_PushStack "create_ts_next_date" $@ |
---|
[88] | 365 | typeset Length |
---|
[29] | 366 | case ${config_UserChoices_PeriodLength} in |
---|
| 367 | *Y|*y) |
---|
| 368 | PeriodLengthInYears=$( echo ${config_UserChoices_PeriodLength} | awk -F '[yY]' '{print $1}' ) |
---|
| 369 | IGCM_date_GetYearMonth ${1} year month |
---|
| 370 | (( Length=0 )) |
---|
| 371 | (( i=0 )) |
---|
| 372 | until [ $i -ge $PeriodLengthInYears ] ; do |
---|
| 373 | (( Length = Length + $( IGCM_date_DaysInYear $(( year + i + 1 )) ) )) |
---|
| 374 | (( i=i+1 )) |
---|
| 375 | done |
---|
| 376 | ;; |
---|
| 377 | *M|*m) |
---|
| 378 | PeriodLengthInMonths=$( echo ${config_UserChoices_PeriodLength} | awk -F '[mM]' '{print $1}' ) |
---|
| 379 | IGCM_date_GetYearMonth ${1} year month |
---|
[64] | 380 | (( year0 = year )) |
---|
[29] | 381 | if [ $(( month + 1 )) -lt 13 ] ; then |
---|
| 382 | month0=$(( month + 1 )) |
---|
[2] | 383 | else |
---|
[29] | 384 | month0=$(( month + 1 - 12 )) |
---|
| 385 | (( year = year0 + 1 )) |
---|
| 386 | fi |
---|
| 387 | (( Length=0 )) |
---|
| 388 | (( i=0 )) |
---|
| 389 | until [ $i -ge $PeriodLengthInMonths ] ; do |
---|
| 390 | if [ $(( month0 + i )) -lt 13 ] ; then |
---|
| 391 | (( Length = Length + $( IGCM_date_DaysInMonth $year $(( month0 + i )) ) )) |
---|
| 392 | else |
---|
| 393 | (( year = year0 + 1 )) |
---|
| 394 | (( Length = Length + $( IGCM_date_DaysInMonth $year $(( month0 + i - 12 )) ) )) |
---|
| 395 | fi |
---|
| 396 | (( i=i+1 )) |
---|
| 397 | done |
---|
| 398 | ;; |
---|
[2] | 399 | *D|*d) |
---|
[29] | 400 | Length=$( echo ${config_UserChoices_PeriodLength} | sed -e "s/[dD]//" ) ;; |
---|
[2] | 401 | *) |
---|
[29] | 402 | IGCM_debug_Exit "create_ts " ${config_UserChoices_PeriodLength} " invalid PeriodLength : choose in 1Y, *M, *D." |
---|
[2] | 403 | IGCM_debug_Verif_Exit_Post ;; |
---|
| 404 | esac |
---|
| 405 | echo ${Length} |
---|
| 406 | |
---|
| 407 | IGCM_debug_PopStack "create_ts_next_date" |
---|
| 408 | } |
---|
| 409 | |
---|
| 410 | # Give the end of the actual $1 period from $2 date |
---|
| 411 | function create_ts_begin_date { |
---|
| 412 | IGCM_debug_PushStack "create_ts_begin_date" $@ |
---|
[88] | 413 | typeset Length |
---|
[29] | 414 | case ${config_UserChoices_PeriodLength} in |
---|
| 415 | *Y|*y) |
---|
| 416 | PeriodLengthInYears=$( echo ${config_UserChoices_PeriodLength} | awk -F '[yY]' '{print $1}' ) |
---|
| 417 | IGCM_date_GetYearMonth ${1} year month |
---|
| 418 | if [ X${2} = Xend ] ; then |
---|
| 419 | (( year = year - PeriodLengthInYears + 1)) |
---|
| 420 | fi |
---|
| 421 | (( Length=0 )) |
---|
| 422 | (( i=0 )) |
---|
| 423 | until [ $i -ge $PeriodLengthInYears ] ; do |
---|
| 424 | (( Length = Length + $( IGCM_date_DaysInYear $(( year + i )) ) )) |
---|
| 425 | (( i=i+1 )) |
---|
| 426 | done |
---|
| 427 | ;; |
---|
| 428 | *M|*m) |
---|
| 429 | PeriodLengthInMonths=$( echo ${config_UserChoices_PeriodLength} | awk -F '[mM]' '{print $1}' ) |
---|
| 430 | IGCM_date_GetYearMonth ${1} year month |
---|
| 431 | if [ X${2} = Xend ] ; then |
---|
[64] | 432 | (( month = month - PeriodLengthInMonths + 1 )) |
---|
[29] | 433 | fi |
---|
[64] | 434 | (( year0 = year )) |
---|
[29] | 435 | if [ $month -le 0 ] ; then |
---|
[64] | 436 | (( month = month + 12 )) |
---|
[29] | 437 | year=$( printf "%04i\n" $(( year - 1 )) ) |
---|
| 438 | fi |
---|
| 439 | month=$( printf "%02i\n" ${month} ) |
---|
| 440 | (( Length=0 )) |
---|
| 441 | (( i=0 )) |
---|
| 442 | until [ $i -ge $PeriodLengthInMonths ] ; do |
---|
| 443 | if [ $(( month + i )) -lt 13 ] ; then |
---|
| 444 | (( Length = Length + $( IGCM_date_DaysInMonth $year $(( month + i )) ) )) |
---|
| 445 | else |
---|
| 446 | (( year = year0 + 1 )) |
---|
| 447 | (( Length = Length + $( IGCM_date_DaysInMonth $year $(( month + i - 12 )) ) )) |
---|
| 448 | fi |
---|
| 449 | (( i=i+1 )) |
---|
| 450 | done |
---|
| 451 | ;; |
---|
[2] | 452 | *D|*d) |
---|
[29] | 453 | Length=$( echo ${config_UserChoices_PeriodLength} | sed -e "s/[dD]//" ) ;; |
---|
[2] | 454 | *) |
---|
[29] | 455 | IGCM_debug_Exit "create_ts " ${config_UserChoices_PeriodLength} " invalid PeriodLength : choose in 1Y, *M, *D." |
---|
[2] | 456 | IGCM_debug_Verif_Exit_Post ;; |
---|
| 457 | esac |
---|
| 458 | echo ${Length} |
---|
| 459 | |
---|
| 460 | IGCM_debug_PopStack "create_ts_begin_date" |
---|
| 461 | } |
---|
| 462 | |
---|
| 463 | ######################################################################## |
---|
| 464 | # |
---|
| 465 | # IS THERE SOME ALLREADY PRODUCED TIME SERIES ? |
---|
| 466 | # IF SO BRING THEM IN THE WORKING DIRECTORY |
---|
| 467 | # |
---|
| 468 | # PS : Keep in mind that IGCM_sys_Get here is a weak link : |
---|
| 469 | # - especially for IDRiS |
---|
| 470 | # - no special protection against "command too long" ! |
---|
| 471 | # - libIGCM_sys should handle that or modify following code part |
---|
| 472 | # |
---|
| 473 | ######################################################################## |
---|
| 474 | |
---|
| 475 | if [ ${StandAlone} != true ] ; then |
---|
| 476 | Running_Flag=$( IGCM_sys_RshMaster "IGCM_card_DefineVariableFromOption \ |
---|
| 477 | ${SUBMIT_DIR}/run.card PostProcessing TimeSeriesRunning ; \ |
---|
| 478 | echo \${run_PostProcessing_TimeSeriesRunning}" ) |
---|
| 479 | |
---|
[149] | 480 | #if [ X${Running_Flag} = Xy ] ; then |
---|
| 481 | # # Time Series Job allready running |
---|
| 482 | # IGCM_debug_Print 1 "Time Series Job allready running exit" |
---|
| 483 | # exit |
---|
| 484 | #fi |
---|
[2] | 485 | # Now run.card know we are running |
---|
[149] | 486 | |
---|
| 487 | |
---|
| 488 | |
---|
| 489 | |
---|
[2] | 490 | IGCM_sys_RshMaster IGCM_card_WriteOption ${SUBMIT_DIR}/run.card PostProcessing TimeSeriesRunning "y" |
---|
[149] | 491 | |
---|
| 492 | |
---|
| 493 | |
---|
| 494 | |
---|
| 495 | |
---|
[2] | 496 | # Get information from last execution |
---|
[149] | 497 | #CompletedFlag=$( IGCM_sys_RshMaster \ |
---|
| 498 | # "IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card PostProcessing TimeSeriesCompleted ;\ |
---|
| 499 | # echo \${run_PostProcessing_TimeSeriesCompleted}" ) |
---|
[2] | 500 | fi |
---|
| 501 | |
---|
| 502 | # Is it the first submission or not ? |
---|
[149] | 503 | |
---|
| 504 | if ( [ X${CompletedFlag} = X ] || [ X${CompletedFlag} = X$( IGCM_date_AddDaysToGregorianDate ${DateBegin} -1 ) ] ) ; then |
---|
[2] | 505 | # First Time Series Submission |
---|
| 506 | FIRST_PASS=TRUE |
---|
[29] | 507 | Length=$( create_ts_begin_date ${DateBegin} begin) |
---|
[2] | 508 | DATE_FIN_JOB_B=$( IGCM_date_AddDaysToGregorianDate ${DateBegin} $(( Length - 1 )) ) |
---|
| 509 | else |
---|
| 510 | # Last Completed Time Series |
---|
| 511 | FIRST_PASS=FALSE |
---|
| 512 | DATE_FIN_JOB_B=${CompletedFlag} |
---|
| 513 | date=${DateBegin}_${DATE_FIN_JOB_B} |
---|
| 514 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 515 | # |
---|
| 516 | IGCM_sys_Mkdir ${RUN_DIR_PATH}/${comp} |
---|
| 517 | # |
---|
| 518 | IGCM_sys_Cd ${RUN_DIR_PATH}/${comp} |
---|
| 519 | # |
---|
[81] | 520 | #set -A liste_file |
---|
| 521 | unset liste_file |
---|
[2] | 522 | # |
---|
| 523 | file_path=${R_SAVE}/${comp}/Analyse |
---|
| 524 | # |
---|
| 525 | i=0 |
---|
| 526 | file=${NULL_STR} |
---|
| 527 | # |
---|
| 528 | for file in $( eval echo \${LISTE_FILE_${comp}[*]} ); do |
---|
| 529 | # |
---|
| 530 | # Determine in which output can we find file |
---|
| 531 | # IE : Analyse/TS or Analyse/DA2TS or ... |
---|
| 532 | # |
---|
| 533 | FlagDir=$( echo ${file} | awk -F "_" '{print $1}' ) |
---|
| 534 | case ${FlagDir} in |
---|
[29] | 535 | *Y) TS_Dir=TS_YE ;; |
---|
| 536 | *M) TS_Dir=TS_MO ;; |
---|
| 537 | *D) TS_Dir=TS_DA ;; |
---|
| 538 | HF) TS_Dir=TS_HF ;; |
---|
| 539 | INS) TS_Dir=TS_INS ;; |
---|
[2] | 540 | esac |
---|
| 541 | for var in $( eval echo \${LISTE_VARS_${file}[*]} ) ; do |
---|
| 542 | # |
---|
[81] | 543 | #set +A liste_file ${liste_file[*]} ${file_path}/${TS_Dir}/${config_UserChoices_JobName}_${date}_${FlagDir}_${var}.nc |
---|
| 544 | liste_file[${#liste_file[*]}]=${file_path}/${TS_Dir}/${config_UserChoices_JobName}_${date}_${FlagDir}_${var}.nc |
---|
[2] | 545 | # |
---|
| 546 | done |
---|
| 547 | done |
---|
| 548 | if [ X${file} != X${NULL_STR} ] ; then |
---|
| 549 | IGCM_sys_Get /l liste_file[*] ${RUN_DIR_PATH}/${comp} |
---|
[108] | 550 | ExitFlag=false |
---|
[2] | 551 | IGCM_debug_Verif_Exit_Post |
---|
| 552 | fi |
---|
| 553 | done |
---|
| 554 | # |
---|
| 555 | LEVEL=0 |
---|
| 556 | # |
---|
| 557 | fi |
---|
| 558 | |
---|
| 559 | ######################################################################## |
---|
| 560 | # |
---|
| 561 | # DEFINE LOOP PARAMETERS |
---|
| 562 | # |
---|
| 563 | ######################################################################## |
---|
| 564 | |
---|
| 565 | DATE_COUNT=${DATE_FIN_JOB_B} |
---|
| 566 | DATE_FIN_JOB_B_LOOP=${DATE_FIN_JOB_B} |
---|
| 567 | |
---|
| 568 | ( [ -n "${LEVEL}" ] && [ ${LEVEL} -eq 0 ] ) && NBRE_FILE_TOT=0 || NBRE_FILE_TOT=1 |
---|
| 569 | |
---|
| 570 | if [ ${DoJob} = true ] ; then |
---|
| 571 | while [ ${DATE_COUNT} -lt ${PeriodDateEnd} ] ; do |
---|
| 572 | (( NBRE_FILE_TOT = NBRE_FILE_TOT + 1 )) |
---|
[29] | 573 | Length=$( create_ts_next_date ${DATE_COUNT} ) |
---|
[2] | 574 | DATE_COUNT=$( IGCM_date_AddDaysToGregorianDate ${DATE_COUNT} ${Length} ) |
---|
| 575 | done |
---|
| 576 | else |
---|
| 577 | NBRE_FILE_TOT=0 |
---|
| 578 | fi |
---|
| 579 | |
---|
| 580 | if [ ${NBRE_FILE_TOT} -le ${UNIX_MAX_LIMIT} ] ; then |
---|
| 581 | NBRE_TOUR=1 |
---|
| 582 | elif [ ${NBRE_FILE_TOT}%${UNIX_MAX_LIMIT} -eq 0 ] ; then |
---|
| 583 | let NBRE_TOUR=${NBRE_FILE_TOT}/${UNIX_MAX_LIMIT} |
---|
| 584 | else |
---|
| 585 | let NBRE_TOUR=${NBRE_FILE_TOT}/${UNIX_MAX_LIMIT}+1 |
---|
| 586 | fi |
---|
| 587 | |
---|
| 588 | CURRENT_LOOP=1 |
---|
| 589 | # THIS LOOP GIVES PARAMETERS FOR THE DATE'S LOOP ie : DATE_COURANTE, DATE_FIN. |
---|
| 590 | # WE HAVE 3 LEVELS |
---|
| 591 | # - LEVEL 1 : JUST ONE LOOP TO COMPLETE |
---|
| 592 | # - LEVEL 2 : WE ARE IN THE "DEEP" LOOP |
---|
| 593 | # - LEVEL 3 : WE ARE IN THE LAST LOOP |
---|
| 594 | |
---|
| 595 | while [ ${CURRENT_LOOP} -le ${NBRE_TOUR} ] ; do |
---|
| 596 | |
---|
| 597 | if [ ${NBRE_FILE_TOT} -le ${UNIX_MAX_LIMIT} ] ; then |
---|
| 598 | # - LEVEL 1 : JUST ONE LOOP TO COMPLETE |
---|
| 599 | NBRE_FILE_LOOP=${NBRE_FILE_TOT} |
---|
| 600 | |
---|
| 601 | if [ ${FIRST_PASS} = TRUE ] ; then |
---|
| 602 | DATE_COURANTE=${DATE_FIN_JOB_B_LOOP} |
---|
| 603 | else |
---|
[29] | 604 | Length=$( create_ts_next_date ${DATE_FIN_JOB_B_LOOP} ) |
---|
[2] | 605 | DATE_COURANTE=$( IGCM_date_AddDaysToGregorianDate ${DATE_FIN_JOB_B_LOOP} ${Length} ) |
---|
| 606 | fi |
---|
| 607 | |
---|
| 608 | DATE_FIN=${PeriodDateEnd} |
---|
| 609 | DATE_FIN_JOB_B_LOOP_PREC=${DATE_FIN_JOB_B_LOOP} |
---|
| 610 | |
---|
| 611 | [ -n "${DATE_LOOP}" ] && DATE_FIN_JOB_B_LOOP=${DATE_LOOP} |
---|
| 612 | [ -n "${LEVEL}" ] && FLAG_B="TRUE" || FLAG_B="FALSE" |
---|
| 613 | |
---|
| 614 | LEVEL=1 |
---|
| 615 | DEPOT="TRUE" |
---|
| 616 | elif [ ${CURRENT_LOOP} -ne ${NBRE_TOUR} ] ; then |
---|
| 617 | # - LEVEL 2 : WE ARE IN THE "DEEP" LOOP |
---|
| 618 | NBRE_FILE_LOOP=${UNIX_MAX_LIMIT} |
---|
| 619 | |
---|
| 620 | if [ ! ${FIRST_PASS} = TRUE ] && [ ${CURRENT_LOOP} -eq 1 ] ; then |
---|
[29] | 621 | Length=$( create_ts_next_date ${DATE_FIN_JOB_B_LOOP} ) |
---|
[2] | 622 | DATE_COURANTE=$( IGCM_date_AddDaysToGregorianDate ${DATE_FIN_JOB_B_LOOP} ${Length} ) |
---|
| 623 | elif [ -z "${DATE_COURANTE}" ] ; then |
---|
| 624 | DATE_COURANTE=${DATE_FIN_JOB_B} |
---|
| 625 | else |
---|
[29] | 626 | Length=$( create_ts_next_date ${DATE_FIN} ) |
---|
[2] | 627 | DATE_COURANTE=$( IGCM_date_AddDaysToGregorianDate ${DATE_FIN} ${Length} ) |
---|
| 628 | fi |
---|
| 629 | |
---|
| 630 | (( TotLength = 0 )) |
---|
| 631 | COMPTEUR=1 |
---|
| 632 | DATE_LOOP=${DATE_COURANTE} |
---|
| 633 | |
---|
| 634 | while [ ${COMPTEUR} -lt ${NBRE_FILE_LOOP} ] ; do |
---|
| 635 | # |
---|
[29] | 636 | Length=$( create_ts_next_date ${DATE_LOOP} ) |
---|
[2] | 637 | DATE_LOOP=$( IGCM_date_AddDaysToGregorianDate ${DATE_LOOP} ${Length} ) |
---|
| 638 | (( TotLength = TotLength + Length )) |
---|
| 639 | (( COMPTEUR = COMPTEUR + 1 )) |
---|
| 640 | # |
---|
| 641 | done # while [ ${COMPTEUR} -le ${NBRE_FILE_LOOP} ] done |
---|
| 642 | DATE_FIN=$( IGCM_date_AddDaysToGregorianDate ${DATE_COURANTE} ${TotLength} ) |
---|
| 643 | |
---|
| 644 | [ -n "${DATE_LOOP}" ] && DATE_FIN_JOB_B_LOOP_PREC=${DATE_FIN_JOB_B_LOOP} ; DATE_FIN_JOB_B_LOOP=${DATE_LOOP} |
---|
| 645 | [ -n "${LEVEL}" ] && [ ${LEVEL} -eq 0 ] && FLAG_B="TRUE" || [ ${CURRENT_LOOP} -gt 1 ] && FLAG_B="TRUE" || FLAG_B="FALSE" |
---|
| 646 | DEPOT="FALSE" |
---|
| 647 | LEVEL=2 |
---|
| 648 | else |
---|
| 649 | # - LEVEL 3 : WE ARE IN THE LAST LOOP |
---|
[149] | 650 | NBRE_FILE_LOOP=$(( ${NBRE_FILE_TOT} % ( ${UNIX_MAX_LIMIT} * ( ${CURRENT_LOOP} - 1 ) ) )) |
---|
[2] | 651 | [ ${NBRE_FILE_LOOP} -eq 0 ] && NBRE_FILE_LOOP=${UNIX_MAX_LIMIT} |
---|
| 652 | |
---|
[29] | 653 | Length=$( create_ts_next_date ${DATE_FIN} ) |
---|
[2] | 654 | DATE_COURANTE=$(IGCM_date_AddDaysToGregorianDate ${DATE_FIN} ${Length} ) |
---|
| 655 | DATE_FIN=${PeriodDateEnd} |
---|
| 656 | [ -n "${DATE_LOOP}" ] && DATE_FIN_JOB_B_LOOP_PREC=${DATE_FIN_JOB_B_LOOP} ; DATE_FIN_JOB_B_LOOP=${DATE_LOOP} |
---|
| 657 | |
---|
| 658 | LEVEL=3 |
---|
| 659 | DEPOT="TRUE" |
---|
| 660 | FLAG_B="TRUE" |
---|
| 661 | fi |
---|
| 662 | |
---|
| 663 | # THEN FOR EACH FILE TYPE WE LOOP BETWEEN DATE_COURANTE AND DATE_FIN. |
---|
| 664 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 665 | # |
---|
| 666 | IGCM_sys_Mkdir ${RUN_DIR_PATH}/${comp} |
---|
| 667 | # |
---|
| 668 | IGCM_sys_Cd ${RUN_DIR_PATH}/${comp} |
---|
| 669 | # |
---|
| 670 | eval R_OUT_${comp}=${R_SAVE}/${comp} |
---|
| 671 | # |
---|
| 672 | i=0 |
---|
| 673 | # |
---|
| 674 | for file in $( eval echo \${LISTE_FILE_${comp}[*]} ); do |
---|
| 675 | # |
---|
| 676 | # Determine in which output can we find file |
---|
| 677 | # IE : Output/MO or Output/DA or ... |
---|
| 678 | # |
---|
| 679 | FlagDir=$( echo ${file} | awk -F "_" '{print $1}' ) |
---|
| 680 | case ${FlagDir} in |
---|
[29] | 681 | *Y) TS_Dir=TS_YE ; FreqDir=YE ;; |
---|
| 682 | *M) TS_Dir=TS_MO ; FreqDir=MO ;; |
---|
[2] | 683 | *D) TS_Dir=TS_DA ; FreqDir=DA ;; |
---|
| 684 | HF) TS_Dir=TS_HF ; FreqDir=HF ;; |
---|
| 685 | INS) TS_Dir=TS_INS ; FreqDir=INS ;; |
---|
| 686 | *) |
---|
| 687 | IGCM_debug_Print 1 "Error in FlagDir=${FlagDir} for file ${file}." |
---|
| 688 | IGCM_sys_Exit "Job create_ts" ;; |
---|
| 689 | esac |
---|
| 690 | |
---|
| 691 | # Initialize array |
---|
[81] | 692 | #set -A liste_file |
---|
| 693 | #set -A liste_file_tmp |
---|
| 694 | unset liste_file |
---|
| 695 | unset liste_file_tmp |
---|
[2] | 696 | eval file_path=\${R_OUT_${comp}}/Output/${FreqDir}/ |
---|
| 697 | |
---|
| 698 | COMPTEUR=1 |
---|
| 699 | DATE_LOOP=${DATE_COURANTE} |
---|
| 700 | |
---|
| 701 | while [ ${COMPTEUR} -le ${NBRE_FILE_LOOP} ] ; do |
---|
| 702 | # |
---|
[29] | 703 | Length1=$( create_ts_begin_date ${DATE_LOOP} end) |
---|
[2] | 704 | DATE_TAB=$( IGCM_date_AddDaysToGregorianDate ${DATE_LOOP} $(( 1 - Length1 )) )_${DATE_LOOP} |
---|
| 705 | |
---|
[29] | 706 | Length2=$( create_ts_next_date ${DATE_LOOP} end) |
---|
[2] | 707 | DATE_LOOP=$( IGCM_date_AddDaysToGregorianDate ${DATE_LOOP} ${Length2} ) |
---|
| 708 | |
---|
[81] | 709 | #set +A liste_file ${liste_file[*]} ${file_path}${config_UserChoices_JobName}_${DATE_TAB}_${file}.nc |
---|
| 710 | #set +A liste_file_tmp ${liste_file_tmp[*]} ${config_UserChoices_JobName}_${DATE_TAB}_${file}.nc |
---|
| 711 | liste_file[${#liste_file[*]}]=${file_path}${config_UserChoices_JobName}_${DATE_TAB}_${file}.nc |
---|
| 712 | liste_file_tmp[${#liste_file_tmp[*]}]=${config_UserChoices_JobName}_${DATE_TAB}_${file}.nc |
---|
[2] | 713 | (( COMPTEUR = COMPTEUR + 1 )) |
---|
| 714 | # |
---|
| 715 | done # while [ ${COMPTEUR} -le ${NBRE_FILE_LOOP} ] done |
---|
| 716 | DATE_LOOP=$( IGCM_date_AddDaysToGregorianDate ${DATE_LOOP} -${Length2} ) |
---|
| 717 | |
---|
| 718 | # Get selected files |
---|
| 719 | IGCM_sys_Get /l liste_file[*] ${RUN_DIR_PATH}/${comp} |
---|
[108] | 720 | ExitFlag=false |
---|
[2] | 721 | IGCM_debug_Verif_Exit_Post |
---|
| 722 | |
---|
| 723 | # Apply IGCM_Patch if needed |
---|
[168] | 724 | if [ ! X${RebuildFrequency} = Xtrue ] ; then |
---|
[149] | 725 | if [ X$( eval echo \${LISTE_PATCHES_${file}[0]} ) != X${NULL_STR} ]; then |
---|
| 726 | for file_t in $( eval echo ${liste_file_tmp[*]} ); do |
---|
| 727 | for Patch in $( eval echo \${LISTE_PATCHES_${file}[*]} ); do |
---|
| 728 | IGCM_${Patch} ${file_t} |
---|
| 729 | done |
---|
[2] | 730 | done |
---|
[149] | 731 | fi |
---|
[2] | 732 | fi |
---|
| 733 | |
---|
| 734 | # WE CAN CONCATENATE FILES AT THIS POINT |
---|
| 735 | [ "${FLAG_B}" = "TRUE" ] && DATE_BUILD_B=${DateBegin}_${DATE_FIN_JOB_B_LOOP_PREC} |
---|
[29] | 736 | Length=$( create_ts_begin_date ${DATE_COURANTE} end) |
---|
[2] | 737 | DATE_BUILD1=$( IGCM_date_AddDaysToGregorianDate ${DATE_COURANTE} -$(( Length - 1 )) ) |
---|
| 738 | DATE_BUILD=${DATE_BUILD1}_${DATE_FIN} |
---|
| 739 | DATE_BUILD_END=${DateBegin}_${DATE_FIN} |
---|
| 740 | |
---|
| 741 | liste_coord=" " |
---|
| 742 | for axis in $( eval echo \${LISTE_AXIS_${file}[*]} ); do |
---|
| 743 | liste_coord=${liste_coord}${axis}"," |
---|
| 744 | done |
---|
| 745 | |
---|
| 746 | # Time axis must be the last dimension |
---|
| 747 | time_axis=${axis} |
---|
| 748 | |
---|
| 749 | # SWITCH BETWEEN MODEL TO FIT PARTICULAR CASE |
---|
| 750 | for var in $( eval echo \${LISTE_VARS_${file}[*]} ) ; do |
---|
| 751 | # |
---|
| 752 | IGCM_sys_ncrcat --hst -v ${liste_coord}${var} ${liste_file_tmp[*]} ${config_UserChoices_JobName}_${DATE_BUILD}_${FlagDir}_${var}.nc |
---|
| 753 | # |
---|
| 754 | # # Change time axis name to be CF compliant |
---|
| 755 | # if [ ${time_axis} != time_counter ]; then |
---|
| 756 | # IGCM_sys_ncrename -O -v ${time_axis},time_counter ${config_UserChoices_JobName}_${DATE_BUILD}_${FlagDir}_${var}.nc |
---|
| 757 | # fi |
---|
| 758 | # |
---|
| 759 | if [ "${FLAG_B}" = "TRUE" ] ; then |
---|
| 760 | # WE CONCATENATE WITH EXISTING FILES |
---|
| 761 | file1=${config_UserChoices_JobName}_${DATE_BUILD_B}_${FlagDir}_${var}.nc |
---|
| 762 | file2=${config_UserChoices_JobName}_${DATE_BUILD}_${FlagDir}_${var}.nc |
---|
| 763 | file_out=${config_UserChoices_JobName}_${DATE_BUILD_END}_${FlagDir}_${var}.nc |
---|
| 764 | IGCM_sys_ncrcat --hst ${file1} ${file2} ${file_out} |
---|
| 765 | # |
---|
| 766 | IGCM_sys_Rm ${file1} ${file2} |
---|
| 767 | fi |
---|
| 768 | # |
---|
| 769 | if [ "${DEPOT}" = "TRUE" ] ; then |
---|
| 770 | # WE PUT FINAL FILE ON FILE SYSTEM |
---|
| 771 | [ "${FLAG_B}" = "FALSE" ] && file_out=${config_UserChoices_JobName}_${DATE_BUILD}_${FlagDir}_${var}.nc |
---|
| 772 | #${ncatted} -a modulo,time_counter,c,c," " ${file_out} |
---|
| 773 | file_before=${config_UserChoices_JobName}_${DateBegin}_${DATE_FIN_JOB_B}_${FlagDir}_${var}.nc |
---|
| 774 | eval IGCM_sys_Put_Out ${file_out} \${R_OUT_${comp}}/Analyse/${TS_Dir}/${file_out} |
---|
| 775 | [ "${FLAG_B}" = "TRUE" ] && eval MENAGE \${R_OUT_${comp}}/Analyse/${TS_Dir} ${file_before} ${file_out} |
---|
| 776 | IGCM_sys_Rm ${file_out} |
---|
| 777 | # |
---|
| 778 | fi |
---|
| 779 | # |
---|
[108] | 780 | ExitFlag=false |
---|
[2] | 781 | IGCM_debug_Verif_Exit_Post |
---|
| 782 | done # for var in ${liste_var} ; do |
---|
| 783 | IGCM_sys_Rm ${liste_file_tmp[*]} |
---|
| 784 | done # for file in ${liste_file_brut} do |
---|
| 785 | done # for comp in ${config_ListOfComponents[*]} ; do |
---|
[108] | 786 | ExitFlag=false |
---|
[2] | 787 | IGCM_debug_Verif_Exit_Post |
---|
| 788 | # GO AHEAD IN DEEPEST LOOP |
---|
| 789 | (( CURRENT_LOOP = CURRENT_LOOP + 1 )) |
---|
| 790 | done # while [ ${CURRENT_LOOP} -le ${NBRE_TOUR} ] do |
---|
| 791 | # FINISH |
---|
| 792 | |
---|
| 793 | # DODS copy |
---|
| 794 | for comp in ${config_ListOfComponents[*]} ; do |
---|
[67] | 795 | for TS_Dir in TS_YE TS_MO TS_DA TS_HF TS_INS ; do |
---|
| 796 | IGCM_sys_TestDirArchive ${R_SAVE}/${comp}/Analyse/${TS_Dir} |
---|
| 797 | [ $? = 0 ] && IGCM_sys_Put_Dods ${comp}/Analyse/${TS_Dir} |
---|
[2] | 798 | done |
---|
| 799 | done |
---|
| 800 | |
---|
| 801 | export POST_DIR; export SUBMIT_DIR; export libIGCM; export R_INIT; export R_BC; export StandAlone |
---|
[178] | 802 | export RESOL_ATM; export RESOL_OCE ; export RESOL_ICE ; export RESOL_MBG ; export RESOL_SRF ; export RESOL_BIOS |
---|
[2] | 803 | |
---|
[178] | 804 | listVarEnv="POST_DIR,SUBMIT_DIR,libIGCM,R_INIT,R_BC,StandAlone,RESOL_ATM,RESOL_OCE,RESOL_ICE,RESOL_MBG,RESOL_SRF,RESOL_BIOS" |
---|
[2] | 805 | export listVarEnv |
---|
| 806 | |
---|
| 807 | #D- |
---|
| 808 | # -------------------------------------------------------------------- |
---|
| 809 | #D- Test if all was right |
---|
| 810 | # -------------------------------------------------------------------- |
---|
| 811 | IGCM_debug_Verif_Exit_Post |
---|
| 812 | # -------------------------------------------------------------------- |
---|
| 813 | #D- Submit MONITORING |
---|
| 814 | # -------------------------------------------------------------------- |
---|
[168] | 815 | ( [ X${TsTask} = X2D ] || [ X${TsTask} = X ] ) && IGCM_sys_QsubPost monitoring |
---|
[2] | 816 | |
---|
| 817 | #D- |
---|
| 818 | # -------------------------------------------------------------------- |
---|
| 819 | #D- Update the run.card |
---|
| 820 | # -------------------------------------------------------------------- |
---|
| 821 | if [ ${StandAlone} != true ] ; then |
---|
| 822 | # Put in run.card end period of time series |
---|
| 823 | IGCM_sys_RshMaster IGCM_card_WriteOption ${SUBMIT_DIR}/run.card PostProcessing TimeSeriesCompleted "${DATE_FIN}" |
---|
| 824 | # We have finish the job ! |
---|
| 825 | IGCM_sys_RshMaster IGCM_card_WriteOption ${SUBMIT_DIR}/run.card PostProcessing TimeSeriesRunning "n" |
---|
| 826 | fi |
---|
| 827 | date |
---|