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AA_create_multi_se @ 544

Last change on this file since 544 was 544, checked in by sdipsl, 13 years ago

Prepare libIGCM for TGCC migration. For now work for CCRT machines ONLY
SX8, SX9 and Titane are independant from DMNFS
- 30 seconds between execution instead of at least 3 minutes ; sometimes hours
SX8, SX9 and Titane use their SCRATCHDIR as a BUFFER (for restart and text)
Titane simulations are entirely post-processed on titane mono
- Working except create_se and atlas (missing software : ncap2, openpbm, ImageMagick?)
Cards are the same up to now
New indentation to ease readability ("svn diff -x -b" to ignore space when differencing)
Project (gen2211) is inherited from AA_job by post-processing jobs
- will stop during config_check if Project is empty
Prepare easy switching (submitting post-processing here or there)
Homogenize CCRTs libIGCM_sys
Bugfixes
Cosmetics

First steps and still a long way to go.

Property svn:keywords set to Revision Author Date

File size: 22.8 KB

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1	#-Q- cesium #!/bin/ksh
2	#-Q- cesium ######################
3	#-Q- cesium ## CESIUM CEA ##
4	#-Q- cesium ######################
5	#-Q- cesium #MSUB -r MULTISE # Nom du job
6	#-Q- cesium #MSUB -N 1 # Reservation du noeud
7	#-Q- cesium #MSUB -n 1 # Reservation du processus
8	#-Q- cesium #MSUB -T 86400 # Limite de temps elapsed du job
9	#-Q- cesium #MSUB -E "-j o"
10	#-Q- cesium #MSUB -E "-S /bin/ksh"
11	#-Q- platine #!/usr/bin/ksh
12	#-Q- platine ###################
13	#-Q- platine ## PLATINE CEA ##
14	#-Q- platine ###################
15	#-Q- platine #BSUB -J MULTISE # Nom du job
16	#-Q- platine #BSUB -N # message a la fin du job
17	#-Q- platine #BSUB -n 1 # reservation des processeurs pour le job
18	#-Q- platine #BSUB -W 1:00 # Limite temps
19	#-Q- platine #BSUB -q post # Passage en queue post
20	#-Q- platine #BSUB -L /bin/ksh
21	#-Q- sx8brodie #!/bin/ksh
22	#-Q- sx8brodie #######################
23	#-Q- sx8brodie ## SX8BRODIE IDRIS ##
24	#-Q- sx8brodie #######################
25	#-Q- sx8brodie # Temps Elapsed max. d'une requete hh:mm:ss
26	#-Q- sx8brodie # @ wall_clock_limit = 1:00:00
27	#-Q- sx8brodie # Nom du travail LoadLeveler
28	#-Q- sx8brodie # @ job_name = MULTISE
29	#-Q- sx8brodie # Fichier de sortie standard du travail
30	#-Q- sx8brodie # @ output = $(job_name).$(jobid)
31	#-Q- sx8brodie # Fichier de sortie d'erreur du travail
32	#-Q- sx8brodie # @ error = $(job_name).$(jobid)
33	#-Q- sx8brodie # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.)
34	#-Q- sx8brodie # @ notification = error
35	#-Q- sx8brodie # @ environment = $DEBUG_debug ; $MODIPSL ; $libIGCM ; $libIGCM_SX ; $SUBMIT_DIR ; $REBUILD_DIR ; $RebuildFromArchive ; $POST_DIR ; $MASTER ; $DateBegin ; $PeriodDateBegin ; $PeriodDateEnd ; $NbRebuildDir ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $RESOL_SBG ; $MASTER
36	#-Q- sx8brodie # @ queue
37	#-Q- aix6 #!/bin/ksh
38	#-Q- aix6 #######################
39	#-Q- aix6 ## VARGAS IDRIS ##
40	#-Q- aix6 #######################
41	#-Q- aix6 # Temps Elapsed max. d'une requete hh:mm:ss
42	#-Q- aix6 # @ wall_clock_limit = 1:00:00
43	#-Q- aix6 # Nom du travail LoadLeveler
44	#-Q- aix6 # @ job_name = MULTISE
45	#-Q- aix6 # Fichier de sortie standard du travail
46	#-Q- aix6 # @ output = $(job_name).$(jobid)
47	#-Q- aix6 # Fichier de sortie d'erreur du travail
48	#-Q- aix6 # @ error = $(job_name).$(jobid)
49	#-Q- aix6 # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.)
50	#-Q- aix6 # @ notification = error
51	#-Q- aix6 # @ environment = $DEBUG_debug ; $MODIPSL ; $libIGCM ; $libIGCM_SX ; $SUBMIT_DIR ; $REBUILD_DIR ; $RebuildFromArchive ; $POST_DIR ; $MASTER ; $DateBegin ; $PeriodDateBegin ; $PeriodDateEnd ; $NbRebuildDir ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $RESOL_SBG ; $MASTER
52	#-Q- aix6 # @ queue
53	#-Q- ulam #!/bin/ksh
54	#-Q- ulam #######################
55	#-Q- ulam ## ULAM IDRIS ##
56	#-Q- ulam #######################
57	#-Q- ulam # Temps Elapsed max. d'une requete hh:mm:ss
58	#-Q- ulam # @ wall_clock_limit = 1:00:00
59	#-Q- ulam # Nom du travail LoadLeveler
60	#-Q- ulam # @ job_name = MULTISE
61	#-Q- ulam # Fichier de sortie standard du travail
62	#-Q- ulam # @ output = $(job_name).$(jobid)
63	#-Q- ulam # Fichier de sortie d'erreur du travail
64	#-Q- ulam # @ error = $(job_name).$(jobid)
65	#-Q- ulam # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.)
66	#-Q- ulam # @ notification = error
67	#-Q- ulam # @ environment = $DEBUG_debug ; $MODIPSL ; $libIGCM ; $libIGCM_SX ; $SUBMIT_DIR ; $REBUILD_DIR ; $RebuildFromArchive ; $POST_DIR ; $MASTER ; $DateBegin ; $PeriodDateBegin ; $PeriodDateEnd ; $NbRebuildDir ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $RESOL_SBG ; $MASTER
68	#-Q- ulam # @ queue
69	#-Q- sx8mercure #!/bin/ksh
70	#-Q- sx8mercure ######################
71	#-Q- sx8mercure ## SX8MERCURE CEA ##
72	#-Q- sx8mercure ######################
73	#-Q- sx8mercure #PBS -N MULTISE # Nom du job
74	#-Q- sx8mercure #PBS -j o # regroupement des stdout et stderr
75	#-Q- sx8mercure #PBS -S /usr/bin/ksh # shell de soumission
76	#-Q- sx8mercure #PBS -l memsz_job=1gb # Limite memoire a 1 Go
77	#-Q- sx8mercure #PBS -l cputim_job=1:00:00 # Limite temps a 1 heures
78	#-Q- sx8mercure #PBS -q scalaire
79	#-Q- sx9mercure #!/bin/ksh
80	#-Q- sx9mercure #########################
81	#-Q- sx9mercure ## CESIUM FOR SX9 CEA ##
82	#-Q- sx9mercure #########################
83	#-Q- sx9mercure #MSUB -r MULTISE # Nom du job
84	#-Q- sx9mercure #MSUB -N 1 # Reservation du noeud
85	#-Q- sx9mercure #MSUB -n 1 # Reservation du processus
86	#-Q- sx9mercure #MSUB -T 86400 # Limite de temps elapsed du job
87	#-Q- sx9mercure #MSUB -E "-j o"
88	#-Q- sx9mercure #MSUB -E "-S /bin/ksh"
89	#-Q- titane #!/bin/ksh
90	#-Q- titane ######################
91	#-Q- titane ## TITANE CEA ##
92	#-Q- titane ######################
93	#-Q- titane #MSUB -r MULTISE # Nom du job
94	#-Q- titane #MSUB -eo
95	#-Q- titane #MSUB -n 1 # Reservation du processus
96	#-Q- titane #MSUB -T 86400 # Limite de temps elapsed du job
97	#-Q- titane #MSUB -q mono
98	#-Q- lxiv8 ######################
99	#-Q- lxiv8 ## OBELIX LSCE ##
100	#-Q- lxiv8 ######################
101	#-Q- lxiv8 #PBS -N MULTISE
102	#-Q- lxiv8 #PBS -m a
103	#-Q- lxiv8 #PBS -j oe
104	#-Q- lxiv8 #PBS -q medium
105	#-Q- lxiv8 #PBS -o SE.$$
106	#-Q- lxiv8 #PBS -S /bin/ksh
107	#-Q- default #!/bin/ksh
108	#-Q- default ##################
109	#-Q- default ## DEFAULT HOST ##
110	#-Q- default ##################
111
112	#**************************************************************
113	# Author: Marie-Alice Foujols
114	# Contact: Marie-Alice.Foujols__at__ipsl.jussieu.fr
115	# $Revision:: $ Revision of last commit
116	# $Author:: $ Author of last commit
117	# $Date:: $ Date of last commit
118	# IPSL (2006)
119	# This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC
120	#
121	#**************************************************************
122
123	#set -eu
124	#set -vx
125
126	date
127
128	#-Q- sx8brodie export OMP_NUM_THREADS=1
129	#-Q- aix6 export OMP_NUM_THREADS=1
130	#-Q- ulam export OMP_NUM_THREADS=1
131
132	########################################################################
133
134	#D- Flag to determine if this job in a standalone mode
135	#D- Default : value from AA_job if any
136	StandAlone=${StandAlone:=true}
137
138	#D- Low level debug : to bypass lib test checks and stack construction
139	#D- Default : value from AA_job if any
140	libIGCM=${libIGCM:=::modipsl::/libIGCM}
141	# WARNING for StandAlone used : To run this script on some machine,
142	# you must check MirrorlibIGCM variable in sys library.
143	# If this variable is true, you must use libIGCM_POST path instead
144	# of your running libIGCM directory.
145
146	#D- Flag to determine atlas job's output directory
147	#D- Default : value from libIGCM_post.ksh if any
148	POST_DIR=${POST_DIR:=${PBS_O_WORKDIR:=$(pwd)}}
149
150	#D- Increased verbosity (1, 2, 3)
151	#D- Default : value from AA_job if any
152	Verbosity=${Verbosity:=3}
153
154	#D- Low level debug : to bypass lib test checks and stack construction
155	#D- Default : value from AA_job if any
156	DEBUG_debug=${DEBUG_debug:=false}
157
158	#D- TEMPORARY Flag to determine atmospheric resolution
159	#D- Default : value from atmospheric driver if any
160	RESOL_ATM=${RESOL_ATM:=ALL}
161
162	#D- Flag to determine surface resolution
163	#D- Default : value from surface driver if any
164	RESOL_SRF=ALL
165
166	#D- Flag to determine surface resolution
167	#D- Default : value from surface driver if any
168	RESOL_SBG=ALL
169
170	#D- TEMPORARY Flag to determine ocean resolution
171	#D- Default : value from ocean driver if any
172	RESOL_OCE=${RESOL_OCE:=ORCA2}
173
174	#D- TEMPORARY Flag to determine ice resolution
175	#D- Default : value from ice driver if any
176	RESOL_ICE=${RESOL_ICE:=ORCA2}
177
178	#D- TEMPORARY Flag to determine marine biogeochemistry resolution
179	#D- Default : value from ice driver if any
180	RESOL_MBG=${RESOL_MBG:=ORCA2}
181
182	########################################################################
183
184	. ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh
185	( ${DEBUG_debug} ) && IGCM_debug_Check
186	. ${libIGCM}/libIGCM_card/libIGCM_card.ksh
187	( ${DEBUG_debug} ) && IGCM_card_Check
188	. ${libIGCM}/libIGCM_date/libIGCM_date.ksh
189	( ${DEBUG_debug} ) && IGCM_date_Check
190	#-------
191	. ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh
192
193	########################################################################
194
195	#set -vx
196
197	IGCM_sys_MkdirWork ${RUN_DIR_PATH}
198	IGCM_sys_Cd ${RUN_DIR_PATH}
199
200	# ------------------------------------------------------------------
201	# Test if all was right before proceeding further
202	# ------------------------------------------------------------------
203	IGCM_debug_Verif_Exit_Post
204
205	if [ ${StandAlone} = true ] ; then
206	CARD_DIR=${SUBMIT_DIR}
207	else
208	CARD_DIR=${RUN_DIR_PATH}/$( basename ${SUBMIT_DIR} )
209	IGCM_sys_Get_Master ${SUBMIT_DIR} ${RUN_DIR_PATH}
210	fi
211
212	#
213	# First of all
214	#
215	IGCM_card_DefineArrayFromSection ${CARD_DIR}/config.card UserChoices
216	typeset option
217	for option in ${config_UserChoices[*]} ; do
218	IGCM_card_DefineVariableFromOption ${CARD_DIR}/config.card UserChoices ${option}
219	done
220	#
221	echo
222	IGCM_debug_PrintVariables 3 config_UserChoices_TagName
223	#IGCM_debug_PrintVariables 3 config_UserChoices_SpaceName
224	#IGCM_debug_PrintVariables 3 config_UserChoices_ExperimentName
225	IGCM_debug_PrintVariables 3 config_UserChoices_CalendarType
226	IGCM_debug_PrintVariables 3 config_UserChoices_DateBegin
227	IGCM_debug_PrintVariables 3 config_UserChoices_DateEnd
228	IGCM_debug_PrintVariables 3 config_UserChoices_PeriodLength
229	echo
230
231	#==================================
232	#R_SAVE : Job output directory
233	if ( [ ! X${config_UserChoices_SpaceName} = X ] && [ ! X${config_UserChoices_ExperimentName} = X ] ) ; then
234	FreeName=$( echo ${config_UserChoices_JobName} \| sed 's/.*_//' )
235	R_SAVE=${R_OUT}/${config_UserChoices_TagName}/${config_UserChoices_SpaceName}/${config_UserChoices_ExperimentName}/${FreeName}
236	R_DODS=${config_UserChoices_TagName}/${config_UserChoices_SpaceName}/${config_UserChoices_ExperimentName}/${FreeName}
237	else
238	R_SAVE=${R_OUT}/${config_UserChoices_TagName}/${config_UserChoices_JobName}
239	R_DODS=${config_UserChoices_TagName}/${config_UserChoices_JobName}
240	fi
241	#
242	IGCM_card_DefineArrayFromSection ${CARD_DIR}/config.card ListOfComponents
243
244	IGCM_card_DefineArrayFromSection ${CARD_DIR}/config.card Post
245
246	#
247	# If option MultiSeasonalFrequency is not found (optionnal) put MultiSeasonalFrequency=50Y
248	#
249	FoundMultiSeasonal=false
250	for option in ${config_Post[*]} ; do
251	if [ ${option} = MultiSeasonalFrequency ] ; then
252	FoundMultiSeasonal=true
253	IGCM_card_DefineVariableFromOption ${CARD_DIR}/config.card Post MultiSeasonalFrequency
254	fi
255	done
256	if [ ! X${FoundMultiSeasonal} = Xtrue ] ; then
257	config_Post_MultiSeasonalFrequency=50Y
258	fi
259	#
260	IGCM_card_DefineVariableFromOption ${CARD_DIR}/config.card Post SeasonalFrequency
261	#
262	# Determine period for seasonnal average. Default : value from AA_job if any
263	#
264	DateBegin=${DateBegin:=$( IGCM_date_ConvertFormatToGregorian ${config_UserChoices_DateBegin} )}
265	#
266	PeriodDateEnd=${PeriodDateEnd:=$( IGCM_date_ConvertFormatToGregorian ${config_UserChoices_DateEnd} )}
267	#
268	IGCM_debug_Print 1 "DefineVariableFromOption : Post "
269	IGCM_debug_PrintVariables 3 config_Post_SeasonalFrequency
270	IGCM_debug_PrintVariables 3 config_Post_MultiSeasonalFrequency
271	echo
272
273	#
274	freq=$( echo ${config_Post_SeasonalFrequency} \| sed -e "s/[yY]//" )
275	#
276	multifreq=$( echo ${config_Post_MultiSeasonalFrequency} \| sed -e "s/[yY]//" )
277	#
278	DIR_OUT=SE_${multifreq}Y
279	#
280	an_multi_fin=$(( $( IGCM_date_ConvertGregorianDateToJulian ${PeriodDateEnd} ) / 1000 ))
281	an_multi_deb=$( IGCM_date_YearDigit $(( an_multi_fin - multifreq + 1 )) )
282	an_multi_fin=$( IGCM_date_YearDigit ${an_multi_fin} )
283	#
284	# For each component selected determine which files need post-processing
285	#
286	for comp in ${config_ListOfComponents[*]} ; do
287	#
288	IGCM_card_DefineArrayFromOption ${CARD_DIR}/config.card ListOfComponents ${comp}
289	eval compname=\${config_ListOfComponents_${comp}[0]} > /dev/null 2>&1
290	#
291	card=${CARD_DIR}/COMP/${compname}.card
292	IGCM_card_DefineArrayFromOption ${card} OutputFiles List
293	#
294	ListFilesName=${compname}_OutputFiles_List
295	eval FileName0=\${${ListFilesName}[0]} > /dev/null 2>&1
296	#
297	if [ X${FileName0} != X${NULL_STR} ] ; then
298	#
299	# INITIALISATION
300	#
301	eval NbFiles=\${#${ListFilesName}[@]} > /dev/null 2>&1
302	typeset i=2
303	#
304	until [ $i -gt $NbFiles ]; do
305	#
306	eval flag_post=\${${ListFilesName}[$i]} > /dev/null 2>&1
307	#
308	if [ X${flag_post} != XNONE ] ; then
309	#
310	# Check if seasonal is required for this file
311	#
312	IGCM_card_DefineArrayFromSection ${card} ${flag_post}
313	#
314	# Seasonal case : If option Seasonal is not found (old cards) put SEASONAL ON by default
315	#
316	# variable option allready typeset above
317	for option in $( eval echo \${${compname}_${flag_post}[*]} ) ; do
318	if [ ${option} = Seasonal ] ; then
319	FoundSeasonal=true
320	IGCM_card_DefineVariableFromOption ${card} ${flag_post} Seasonal
321	fi
322	done
323	#
324	if [ ! X${FoundSeasonal} = Xtrue ] ; then
325	eval ${compname}_${flag_post}_Seasonal=ON
326	fi
327	#
328	if [ ! X$( eval echo \${${compname}_${flag_post}_Seasonal} ) = XON ] ; then
329	(( i=i+3 ))
330	continue
331	fi
332	#
333	# CREATE LIST
334	#
335	FILE=$( echo ${flag_post} \| awk "-FPost_" '{print $2}' )
336	#
337	DIRECTORY=${R_SAVE}/${comp}/Analyse/SE
338	#
339	MULTI_DIRECTORY=${R_SAVE}/${comp}/Analyse/${DIR_OUT}
340	#
341	TestedFile=${config_UserChoices_JobName}_SE_${an_multi_deb}_${an_multi_fin}_${FILE}.nc
342	#
343	IGCM_sys_TestFileArchive ${MULTI_DIRECTORY}/${TestedFile}
344	if [ ! $? = 0 ] ; then
345	eval set +A LISTE_FILE_${comp} \$\{LISTE_FILE_${comp}[*]} ${FILE}
346	fi
347	fi
348	(( i=i+3 ))
349	done # until [ $i -eq $NbFiles ]
350	fi
351	done # for comp
352
353	for comp in ${config_ListOfComponents[*]} ; do
354	#
355	eval R_OUT_${comp}=${R_SAVE}/${comp}
356	#
357	i=0
358	for file in $( eval echo \${LISTE_FILE_${comp}[*]} ); do
359	#
360	RESULT_MULTI_SE=${config_UserChoices_JobName}_SE_${an_multi_deb}_${an_multi_fin}_${file}.nc
361	# Do not redo an existing SE
362	IGCM_sys_TestFileArchive ${R_SAVE}/${comp}/Analyse/${DIR_OUT}/${RESULT_MULTI_SE}
363	if [ $? = 0 ] ; then
364	continue
365	fi
366	#
367	eval file_path=\${R_OUT_${comp}}/Analyse/SE/
368	#
369	(( an = an_multi_deb ))
370	# Initialize array
371	#set -A liste_file_se
372	#set -A liste_file_se_tmp
373	unset liste_file_se
374	unset liste_file_se_tmp
375	while [ ${an} -le ${an_multi_fin} ] ; do
376	#
377	an_deb=$(printf "%04i\n" ${an} )
378	#
379	(( an_fin = an_deb + freq - 1 ))
380	date=${an_deb}_${an_fin}
381	#set +A liste_file_se ${liste_file_se[*]} ${file_path}${config_UserChoices_JobName}_${date}_${file}.nc
382	#set +A liste_file_se_tmp ${liste_file_se_tmp[*]} ${config_UserChoices_JobName}_${date}_${file}.nc
383	liste_file_se[${#liste_file_se[*]}]=${file_path}${config_UserChoices_JobName}_SE_${date}_${file}.nc
384	liste_file_se_tmp[${#liste_file_se_tmp[*]}]=${config_UserChoices_JobName}_SE_${date}_${file}.nc
385	(( an = an + freq ))
386	done
387	#
388	IGCM_sys_Get /l liste_file_se[*] ${RUN_DIR_PATH}
389	IGCM_debug_Verif_Exit_Post
390	# Search of common list of variables to be treated
391	nbfile=0
392	for file_common_var in ${liste_file_se_tmp[*]} ; do
393	ncdump -h ${file_common_var} \| grep -E 'float\|double' \| cut -f 1 -d '(' \| cut -f 2 -d ' ' >> tmpfile_ncra
394	(( nbfile = nbfile + 1 ))
395	done
396	list_var_final_ncra=`cat tmpfile_ncra \| sort \| uniq -c \| awk -v nbfile=$nbfile '{if ($1 == nbfile) {print $2}}' \| paste -s -d ','`
397	IGCM_sys_Rm tmpfile_ncra
398
399	# detect time counter : time or time_counter ie unlimited variable
400	var_unlim=$(ncdump -h ${liste_file_se_tmp[1]}\|grep UNLIMITED\| cut -d ' ' -f 1)
401
402	for mois in 01 02 03 04 05 06 07 08 09 10 11 12 ; do
403	#
404	(( nb = ${mois} - 1 ))
405	#
406	OUT_SE[${nb}]=${config_UserChoices_JobName}_SE${mois}_${an_deb}_${an_fin}_${file}.nc
407	IGCM_sys_ncra -O -v ${list_var_final_ncra} -d ${var_unlim},${nb},,12 ${liste_file_se_tmp[*]} ${OUT_SE[${nb}]}
408	done
409	IGCM_sys_Rm ${liste_file_se_tmp[*]}
410	#
411
412	# Search of common list of variables to be treated
413	nbfile=0
414	for file_common_var in ${OUT_SE[*]} ; do
415	ncdump -h ${file_common_var} \| grep -E 'float\|double' \| cut -f 1 -d '(' \| cut -f 2 -d ' ' >> tmpfile_ncrcat
416	(( nbfile = nbfile + 1 ))
417	done
418	list_var_final_ncrcat=`cat tmpfile_ncrcat \| sort \| uniq -c \| awk -v nbfile=$nbfile '{if ($1 == nbfile) {print $2}}' \| paste -s -d ','`
419	IGCM_sys_Rm tmpfile_ncrcat
420
421	IGCM_sys_ncrcat -O -v ${list_var_final_ncrcat} ${OUT_SE[*]} ${RESULT_MULTI_SE}
422	#
423	IGCM_sys_Rm ${OUT_SE[*]}
424
425	# Put correct climatological axis following calendar
426	case ${config_UserChoices_CalendarType} in
427	360d\|360_day)
428	# 360 days
429	ncap2cmd="'defdim(\"tbnds\",2) ; ${var_unlim}[${var_unlim}]={15, 45, 75, 105, 135, 165, 195, 225, 255, 285, 315, 345.} ; ${var_unlim}_bnds[${var_unlim},tbnds]={0, 30, 30, 60, 60, 90, 90, 120, 120, 150, 150, 180, 180, 210, 210, 240, 240, 270, 270, 300, 300, 330, 330, 360.} ; ${var_unlim}@units=\"days since 0000-01-01 00:00:00\" ; ${var_unlim}@time_origin=\"01-JAN-0000 00:00:00\" ; ${var_unlim}@calendar=\"360_day\" ; ${var_unlim}@bounds=\"${var_unlim}_bnds\"'"
430	;;
431	noleap\|365_day)
432	# 365 days
433	ncap2cmd="'defdim(\"tbnds\",2) ; ${var_unlim}[${var_unlim}]={15.5, 45, 74.5, 105, 135.5, 166, 196.5, 227.5, 258, 288.5, 319, 349.5} ; ${var_unlim}_bnds[${var_unlim},tbnds]={0, 31, 31, 59, 59, 90, 90, 120, 120, 151, 151, 181, 181, 212, 212, 243, 243, 273, 273, 304, 304, 334, 334, 365.} ; ${var_unlim}@units=\"days since 0000-01-01 00:00:00\" ; ${var_unlim}@time_origin=\"01-JAN-0000 00:00:00\" ; ${var_unlim}@calendar=\"365_day\" ; ${var_unlim}@bounds=\"${var_unlim}_bnds\"'"
434	;;
435	all_leap\|366_day)
436	# 366 days
437	ncap2cmd="'defdim(\"tbnds\",2) ; ${var_unlim}[${var_unlim}]={15.5, 45.5, 75.5, 106, 136.5, 167, 197.5, 228.5, 259, 289.5, 320, 350.5} ; ${var_unlim}_bnds[${var_unlim},tbnds]={0, 31, 31, 60, 60, 91, 91, 121, 121, 152, 152, 182, 182, 213, 213, 244, 244, 274, 274, 305, 305, 335, 335, 366.} ; ${var_unlim}@units=\"days since 0000-01-01 00:00:00\" ; ${var_unlim}@time_origin=\"01-JAN-0000 00:00:00\" ; ${var_unlim}@calendar=\"366_day\" ; ${var_unlim}@bounds=\"${var_unlim}_bnds\"'"
438	;;
439	leap\|gregorian\|standard)
440	# 365.2425 days
441	ncap2cmd="'defdim(\"tbnds\",2) ; ${var_unlim}[${var_unlim}]={15.5, 45.12125, 74.7425, 105.2425, 135.7425, 166.2425, 196.7425, 227.7425, 258.2425, 288.7425, 319.2425, 349.7425} ; ${var_unlim}_bnds[${var_unlim},tbnds]={0, 31, 31, 59.2425, 59.2425, 90.2425, 90.2425, 120.2425, 120.2425, 151.2425, 151.2425, 181.2425, 181.2425, 212.2425, 212.2425, 243.2425, 243.2425, 273.2425, 273.2425, 304.2425, 304.2425, 334.2425, 334.2425, 365.2425} ; ${var_unlim}@units=\"days since 0000-01-01 00:00:00\" ; ${var_unlim}@time_origin=\"01-JAN-0000 00:00:00\" ; ${var_unlim}@calendar=\"gregorian\" ; ${var_unlim}@bounds=\"${var_unlim}_bnds\"'"
442	;;
443	esac
444	eval IGCM_sys_ncap2 -Oh -s $ncap2cmd ${RESULT_MULTI_SE} tmp.nc
445	IGCM_sys_Rm ${RESULT_MULTI_SE}
446	IGCM_sys_Mv tmp.nc ${RESULT_MULTI_SE}
447	#
448	eval IGCM_sys_Put_Out ${RESULT_MULTI_SE} \${R_OUT_${comp}}/Analyse/${DIR_OUT}/${RESULT_MULTI_SE}
449	IGCM_sys_Rm ${RESULT_MULTI_SE}
450	#
451	done
452	done
453
454	# DODS copy
455	for comp in ${config_ListOfComponents[*]} ; do
456	IGCM_sys_TestDirArchive ${R_SAVE}/${comp}/Analyse/${DIR_OUT}
457	[ $? = 0 ] && IGCM_sys_Put_Dods ${comp}/Analyse/${DIR_OUT}
458	done
459
460	YEARS=${an_multi_deb}_${an_multi_fin}
461
462	export POST_DIR; export SUBMIT_DIR; export libIGCM; export R_INIT; export R_BC; export StandAlone
463	export RESOL_ATM; export RESOL_OCE ; export RESOL_ICE ; export RESOL_MBG ; export RESOL_SRF ; export RESOL_SBG
464	export R_SAVE; export config_UserChoices_JobName; export config_UserChoices_TagName; export YEARS; export DIR_OUT
465	listVarEnv="POST_DIR,SUBMIT_DIR,libIGCM,R_INIT,R_BC,StandAlone,RESOL_ATM,RESOL_OCE,RESOL_ICE,RESOL_MBG,RESOL_SRF,RESOL_SBG,R_SAVE,config_UserChoices_JobName,config_UserChoices_TagName,YEARS,DIR_OUT"
466	export listVarEnv;
467
468	#D-
469	# --------------------------------------------------------------------
470	#D- Test if all was right before ATLAS
471	# --------------------------------------------------------------------
472	IGCM_debug_Verif_Exit_Post
473
474	if [ ${config_UserChoices_TagName} = "IPSLCM4_v1_OASIS3" ] \|\| \
475	[ ${config_UserChoices_TagName} = "IPSLCM4_v2" ] \|\| \
476	[ ${config_UserChoices_TagName} = "IPSL_ESM_V1" ] ; then
477	#
478	Script_Post_Output=atlas_ORCHIDEE.${PeriodDateEnd} ;
479	IGCM_sys_QsubPost atlas_ORCHIDEE ;
480	Script_Post_Output=atlas_LDMZ.${PeriodDateEnd} ;
481	IGCM_sys_QsubPost atlas_LMDZ ;
482	Script_Post_Output=atlas_ORCA_LIM.${PeriodDateEnd} ;
483	IGCM_sys_QsubPost atlas_ORCA_LIM ;
484	Script_Post_Output=additionnal.${PeriodDateEnd} ;
485	IGCM_sys_QsubPost additionnal ;
486	#
487	elif [ ${config_UserChoices_TagName} = "IPSLCM5" ] \|\| \
488	[ ${config_UserChoices_TagName} = "IPSLCM5A" ] \|\| \
489	[ ${config_UserChoices_TagName} = "IPSLCM5B" ] \|\| \
490	[ ${config_UserChoices_TagName} = "IPSLCM5A-MR" ] ; then
491	Script_Post_Output=atlas_ORCHIDEE.${PeriodDateEnd} ;
492	IGCM_sys_QsubPost atlas_ORCHIDEE ;
493	Script_Post_Output=atlas_LDMZ.${PeriodDateEnd} ;
494	IGCM_sys_QsubPost atlas_LMDZ ;
495	Script_Post_Output=atlas_ORCA_LIM.${PeriodDateEnd} ;
496	IGCM_sys_QsubPost atlas_ORCA_LIM ;
497	Script_Post_Output=atlas_PISCES.${PeriodDateEnd} ;
498	IGCM_sys_QsubPost atlas_PISCES ;
499	#
500	elif [ ${config_UserChoices_TagName} = "LMDZ4OR" ] \|\| \
501	[ ${config_UserChoices_TagName} = "LMDZOR" ] \|\| \
502	[ ${config_UserChoices_TagName} = "LMDZ4OR_v2" ] ; then
503	#
504	Script_Post_Output=atlas_LDMZ.${PeriodDateEnd} ;
505	IGCM_sys_QsubPost atlas_LMDZ ;
506	Script_Post_Output=atlas_ORCHIDEE.${PeriodDateEnd} ;
507	IGCM_sys_QsubPost atlas_ORCHIDEE ;
508	#
509	elif [ ${config_UserChoices_TagName} = "LMDZ" ] ; then
510	#
511	Script_Post_Output=atlas_LDMZ.${PeriodDateEnd} ;
512	IGCM_sys_QsubPost atlas_LMDZ ;
513	#
514	elif [ ${config_UserChoices_TagName} = "OL" ] \|\| \
515	[ ${config_UserChoices_TagName} = "OL2" ] ; then
516	#
517	Script_Post_Output=atlas_ORCHIDEE.${PeriodDateEnd} ;
518	IGCM_sys_QsubPost atlas_ORCHIDEE ;
519	#
520	elif [ ${config_UserChoices_TagName} = "ORCA2_LIM" ] \|\|
521	[ ${config_UserChoices_TagName} = "ORCA2_LIM2" ] ; then
522	#
523	Script_Post_Output=atlas_ORCA_LIM.${PeriodDateEnd} ;
524	IGCM_sys_QsubPost atlas_ORCA_LIM ;
525	elif [ ${config_UserChoices_TagName} = "ORCA2_LIM2_PISCES" ] ; then
526	#
527	Script_Post_Output=atlas_ORCA_LIM.${PeriodDateEnd} ;
528	IGCM_sys_QsubPost atlas_ORCA_LIM ;
529	Script_Post_Output=atlas_PISCES.${PeriodDateEnd} ;
530	IGCM_sys_QsubPost atlas_PISCES ;
531	elif [ ${config_UserChoices_TagName} = "ORCA2_OFF_PISCES" ] ; then
532	#
533	Script_Post_Output=atlas_PISCES.${PeriodDateEnd} ;
534	IGCM_sys_QsubPost atlas_PISCES ;
535	#
536	fi
537
538	# Clean RUN_DIR_PATH (necessary for cesium)
539	IGCM_sys_RmRunDir -Rf ${RUN_DIR_PATH}

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source: trunk/libIGCM/AA_create_multi_se @ 544

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