[314] | 1 | #-Q- cesium #!/bin/ksh |
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| 2 | #-Q- cesium ###################### |
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| 3 | #-Q- cesium ## CESIUM CEA ## |
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| 4 | #-Q- cesium ###################### |
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| 5 | #-Q- cesium #MSUB -r ATL_ADD # Nom du job |
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| 6 | #-Q- cesium #MSUB -N 1 # Reservation du noeud |
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| 7 | #-Q- cesium #MSUB -n 2 # Reservation du processus |
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| 8 | #-Q- cesium #MSUB -c 4 # Reservation du core |
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| 9 | #-Q- cesium #MSUB -T 86400 # Limite de temps elapsed du job |
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| 10 | #-Q- cesium #MSUB -E "-j o" |
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| 11 | #-Q- cesium #MSUB -E "-S /bin/ksh" |
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[622] | 12 | #-Q- curie ###################### |
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| 13 | #-Q- curie ## CURIE TGCC/CEA ## |
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| 14 | #-Q- curie ###################### |
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[626] | 15 | #-Q- curie #MSUB -r ATL_ADD # Nom du job |
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[622] | 16 | #-Q- curie #MSUB -eo |
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| 17 | #-Q- curie #MSUB -n 1 # Reservation du processus |
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| 18 | #-Q- curie #MSUB -T 86400 # Limite de temps elapsed du job |
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[2] | 19 | #-Q- platine #!/usr/bin/ksh |
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| 20 | #-Q- platine ################## |
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| 21 | #-Q- platine ## PLATINE CEA ## |
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| 22 | #-Q- platine ################## |
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[15] | 23 | #-Q- platine #BSUB -J ATL_ADD # Nom du job |
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[2] | 24 | #-Q- platine #BSUB -N # message a la fin du job |
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| 25 | #-Q- platine #BSUB -n 1 # reservation des processeurs pour le job |
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| 26 | #-Q- platine #BSUB -W 1:00 # Limite temps |
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[18] | 27 | #-Q- platine #BSUB -q post # Passage en queue post |
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[426] | 28 | #-Q- platine #BSUB -L /bin/ksh |
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[59] | 29 | #-Q- sx8brodie #!/bin/ksh |
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[2] | 30 | #-Q- sx8brodie ####################### |
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| 31 | #-Q- sx8brodie ## SX8BRODIE IDRIS ## |
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| 32 | #-Q- sx8brodie ####################### |
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[58] | 33 | #-Q- sx8brodie # Temps Elapsed max. d'une requete hh:mm:ss |
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[504] | 34 | #-Q- sx8brodie # @ wall_clock_limit = 1:00:00 |
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[58] | 35 | #-Q- sx8brodie # Nom du travail LoadLeveler |
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[60] | 36 | #-Q- sx8brodie # @ job_name = ATL_ADD |
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[58] | 37 | #-Q- sx8brodie # Fichier de sortie standard du travail |
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| 38 | #-Q- sx8brodie # @ output = $(job_name).$(jobid) |
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| 39 | #-Q- sx8brodie # Fichier de sortie d'erreur du travail |
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| 40 | #-Q- sx8brodie # @ error = $(job_name).$(jobid) |
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| 41 | #-Q- sx8brodie # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.) |
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| 42 | #-Q- sx8brodie # @ notification = error |
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[178] | 43 | #-Q- sx8brodie # @ environment = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $MASTER |
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[58] | 44 | #-Q- sx8brodie # @ queue |
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[68] | 45 | #-Q- aix6 #!/bin/ksh |
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| 46 | #-Q- aix6 ####################### |
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| 47 | #-Q- aix6 ## VARGAS IDRIS ## |
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| 48 | #-Q- aix6 ####################### |
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| 49 | #-Q- aix6 # Temps Elapsed max. d'une requete hh:mm:ss |
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[504] | 50 | #-Q- aix6 # @ wall_clock_limit = 1:00:00 |
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[68] | 51 | #-Q- aix6 # Nom du travail LoadLeveler |
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| 52 | #-Q- aix6 # @ job_name = ATL_ADD |
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[108] | 53 | #-Q- aix6 # Fichier de sortie standard du travail |
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[68] | 54 | #-Q- aix6 # @ output = $(job_name).$(jobid) |
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| 55 | #-Q- aix6 # Fichier de sortie d'erreur du travail |
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| 56 | #-Q- aix6 # @ error = $(job_name).$(jobid) |
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| 57 | #-Q- aix6 # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.) |
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| 58 | #-Q- aix6 # @ notification = error |
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[178] | 59 | #-Q- aix6 # @ environment = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $MASTER |
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[68] | 60 | #-Q- aix6 # @ queue |
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[386] | 61 | #-Q- ulam #!/bin/ksh |
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| 62 | #-Q- ulam ####################### |
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| 63 | #-Q- ulam ## ULAM IDRIS ## |
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| 64 | #-Q- ulam ####################### |
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| 65 | #-Q- ulam # Temps Elapsed max. d'une requete hh:mm:ss |
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[500] | 66 | #-Q- ulam # @ wall_clock_limit = 1:00:00 |
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[386] | 67 | #-Q- ulam # Nom du travail LoadLeveler |
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| 68 | #-Q- ulam # @ job_name = ATL_ADD |
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| 69 | #-Q- ulam # Fichier de sortie standard du travail |
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| 70 | #-Q- ulam # @ output = $(job_name).$(jobid) |
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| 71 | #-Q- ulam # Fichier de sortie d'erreur du travail |
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| 72 | #-Q- ulam # @ error = $(job_name).$(jobid) |
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| 73 | #-Q- ulam # pour recevoir un mail en cas de depassement du temps Elapsed (ou autre pb.) |
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| 74 | #-Q- ulam # @ notification = error |
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| 75 | #-Q- ulam # @ environment = $POST_DIR ; $SUBMIT_DIR ; $libIGCM ; $R_INIT ; $R_BC ; $StandAlone ; $RESOL_ATM ; $RESOL_OCE ; $RESOL_ICE ; $RESOL_MBG ; $RESOL_SRF ; $R_SAVE ; $config_UserChoices_JobName ; $config_UserChoices_TagName ; $YEARS ; $MASTER |
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| 76 | #-Q- ulam # @ queue |
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[2] | 77 | #-Q- sx8mercure #!/bin/ksh |
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| 78 | #-Q- sx8mercure ###################### |
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| 79 | #-Q- sx8mercure ## SX8MERCURE CEA ## |
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| 80 | #-Q- sx8mercure ###################### |
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[15] | 81 | #-Q- sx8mercure #PBS -N ATL_ADD # Nom du job |
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[2] | 82 | #-Q- sx8mercure #PBS -j o # regroupement des stdout et stderr |
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| 83 | #-Q- sx8mercure #PBS -S /usr/bin/ksh # shell de soumission |
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| 84 | #-Q- sx8mercure #PBS -l memsz_job=1gb # Limite memoire a 1 Go |
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| 85 | #-Q- sx8mercure #PBS -l cputim_job=2:00:00 # Limite temps a 2 heures |
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[299] | 86 | #-Q- sx8mercure #PBS -q scalaire |
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[172] | 87 | #-Q- sx9mercure #!/bin/ksh |
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[616] | 88 | #-Q- sx9mercure ###################### |
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| 89 | #-Q- sx9mercure ## SX9MERCURE CCRT ## |
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| 90 | #-Q- sx9mercure ###################### |
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| 91 | #-Q- sx9mercure #PBS -N ATL_ADD # Nom du job |
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| 92 | #-Q- sx9mercure #PBS -j o # regroupement des stdout et stderr |
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| 93 | #-Q- sx9mercure #PBS -S /usr/bin/ksh # shell de soumission |
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| 94 | #-Q- sx9mercure #PBS -l memsz_job=1gb # Limite memoire a 1 Go |
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| 95 | #-Q- sx9mercure #PBS -l elapstim_req=2:00:00 # Limite temps a 2 heures |
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| 96 | #-Q- sx9mercure #PBS -q scalaire |
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[222] | 97 | #-Q- titane #!/bin/ksh |
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| 98 | #-Q- titane ###################### |
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| 99 | #-Q- titane ## TITANE CEA ## |
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| 100 | #-Q- titane ###################### |
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[544] | 101 | #-Q- titane #MSUB -r ATL_ADD # Nom du job |
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| 102 | #-Q- titane #MSUB -eo |
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| 103 | #-Q- titane #MSUB -n 1 # Reservation du processus |
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[222] | 104 | #-Q- titane #MSUB -T 86400 # Limite de temps elapsed du job |
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[544] | 105 | #-Q- titane #MSUB -q mono |
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[2] | 106 | #-Q- default #!/bin/ksh |
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| 107 | #-Q- default ################## |
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| 108 | #-Q- default ## DEFAULT HOST ## |
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| 109 | #-Q- default ################## |
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| 110 | |
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[373] | 111 | #************************************************************** |
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| 112 | # Author: Sebastien Denvil |
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| 113 | # Contact: Sebastien.Denvil__at__ipsl.jussieu.fr |
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| 114 | # $Revision:: $ Revision of last commit |
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| 115 | # $Author:: $ Author of last commit |
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| 116 | # $Date:: $ Date of last commit |
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[2] | 117 | # IPSL (2006) |
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| 118 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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[373] | 119 | # |
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| 120 | #************************************************************** |
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[2] | 121 | |
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[108] | 122 | #set -eu |
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| 123 | #set -vx |
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| 124 | |
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[2] | 125 | date |
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| 126 | |
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| 127 | #-Q- sx8brodie export OMP_NUM_THREADS=1 |
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[68] | 128 | #-Q- aix6 export OMP_NUM_THREADS=1 |
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[386] | 129 | #-Q- ulam export OMP_NUM_THREADS=1 |
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[2] | 130 | |
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| 131 | ######################################################################### |
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| 132 | |
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[108] | 133 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
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| 134 | ( ${DEBUG_debug} ) && IGCM_debug_Check |
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| 135 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
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| 136 | ( ${DEBUG_debug} ) && IGCM_card_Check |
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| 137 | . ${libIGCM}/libIGCM_date/libIGCM_date.ksh |
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| 138 | ( ${DEBUG_debug} ) && IGCM_date_Check |
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| 139 | #------- |
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| 140 | . ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh |
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[2] | 141 | |
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| 142 | ####################################################################### |
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| 143 | |
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| 144 | #set -vx |
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| 145 | |
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[108] | 146 | #=========================================== |
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[2] | 147 | R_ATLAS=ATLAS/SE_${YEARS} |
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| 148 | R_OUT_OCE=${R_SAVE}/OCE |
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| 149 | |
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[34] | 150 | RUN_DIR=${RUN_DIR_PATH}/ATLAS_ADD_${YEARS} |
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| 151 | IGCM_sys_MkdirWork ${RUN_DIR} |
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| 152 | IGCM_sys_Cd ${RUN_DIR} |
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[2] | 153 | |
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[436] | 154 | # ------------------------------------------------------------------ |
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| 155 | # Test if all was right before proceeding further |
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| 156 | # ------------------------------------------------------------------ |
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| 157 | IGCM_debug_Verif_Exit_Post |
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| 158 | |
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[2] | 159 | # -------------------------------------------- |
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| 160 | # Insert your commands between III...III lines |
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| 161 | # and precise produced directories to save |
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| 162 | # IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII |
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| 163 | |
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[34] | 164 | IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_T.nc ${RUN_DIR}/SE_grid_T.nc |
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| 165 | IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_U.nc ${RUN_DIR}/SE_grid_U.nc |
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| 166 | IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_V.nc ${RUN_DIR}/SE_grid_V.nc |
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| 167 | IGCM_sys_Get ${R_OUT_OCE}/Analyse/SE/${config_UserChoices_JobName}_SE_${YEARS}_1M_grid_W.nc ${RUN_DIR}/SE_grid_W.nc |
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[2] | 168 | |
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[34] | 169 | atlas -o ${RUN_DIR}/${R_ATLAS}/ADD -p landscape=true,angle=-90,nup=1x1 ${FER_ATLAS}/atlas_p_ORCA2_add_*.cfg ${config_UserChoices_JobName} |
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[2] | 170 | |
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| 171 | # IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII |
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| 172 | |
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| 173 | # Put ferret journal files together |
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| 174 | for file in $( ls ${R_ATLAS}/ADD/*/*jnl ) ; do |
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| 175 | echo -e "\n\n################################" ; |
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| 176 | echo -e "$file\n" ; cat $file ; |
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| 177 | done > ${R_ATLAS}/ADD/allferretscript.txt |
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| 178 | |
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| 179 | # Clear some files |
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| 180 | find . \( -name "*.stdout" -o -name "*.jnl" \) -print -exec rm -f {} \; |
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| 181 | |
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| 182 | # Save files |
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| 183 | IGCM_sys_Put_Dir ATLAS ${R_SAVE} |
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| 184 | |
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| 185 | IGCM_sys_Rm -Rf ATLAS |
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| 186 | IGCM_sys_Rm -f SE_grid_?.nc |
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| 187 | |
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| 188 | # DODS copy |
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[67] | 189 | IGCM_sys_TestDirArchive ${R_SAVE}/${R_ATLAS} |
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| 190 | [ $? = 0 ] && IGCM_sys_Put_Dods ${R_ATLAS} |
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