[2] | 1 | #!/bin/ksh |
---|
| 2 | |
---|
| 3 | #************************************************************** |
---|
| 4 | # Author: Sebastien Denvil, Martial Mancip |
---|
| 5 | # Contact: Sebastien.Denvil@ipsl.jussieu.fr Martial.Mancip@ipsl.jussieu.fr |
---|
[4] | 6 | # $Date$ |
---|
[5] | 7 | # $Author$ |
---|
| 8 | # $Revision$ |
---|
[2] | 9 | # IPSL (2006) |
---|
| 10 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
---|
| 11 | # History: |
---|
| 12 | # Modification: |
---|
| 13 | # |
---|
| 14 | #************************************************************** |
---|
| 15 | |
---|
| 16 | #======================================================================== |
---|
| 17 | function IGCM_comp_Initialize |
---|
| 18 | { |
---|
| 19 | IGCM_debug_PushStack "IGCM_comp_Initialize" |
---|
| 20 | |
---|
| 21 | # Debug Print : |
---|
| 22 | echo |
---|
| 23 | IGCM_debug_Print 1 "IGCM_comp_Initialize :" |
---|
| 24 | echo |
---|
| 25 | |
---|
| 26 | typeset comp compname comptagname CompatibilityTag auxprint card_UserChoices first_option |
---|
| 27 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 28 | # Debug Print |
---|
| 29 | IGCM_debug_Print 1 ${comp} |
---|
| 30 | # Define component |
---|
| 31 | IGCM_card_DefineArrayFromOption ${SUBMIT_DIR}/config.card ListOfComponents ${comp} |
---|
| 32 | eval compname=\${config_ListOfComponents_${comp}[0]} > /dev/null 2>&1 |
---|
| 33 | eval comptagname=\${config_ListOfComponents_${comp}[1]} > /dev/null 2>&1 |
---|
| 34 | |
---|
| 35 | # Read libIGCM compatibility version in ${compname}.card |
---|
| 36 | card=${SUBMIT_DIR}/COMP/${compname}.card |
---|
| 37 | IGCM_card_DefineVariableFromOption ${card} Compatibility libIGCM |
---|
| 38 | eval CompatibilityTag=\${${compname}_Compatibility_libIGCM} > /dev/null 2>&1 |
---|
| 39 | |
---|
| 40 | if [ ! "${CompatibilityTag}" = "${libIGCM_CurrentTag}" ] ; then |
---|
| 41 | IGCM_debug_Exit "${compname}.card is not compatible with libIGCM version ${libIGCM_CurrentTag} see libIGCM FAQ http://wiki.ipsl.jussieu.fr/wiki_ipsl/IGCMG/libIGCM/DocUtilisateur/FAQ ." |
---|
| 42 | fi |
---|
| 43 | |
---|
| 44 | # Manage component executable |
---|
| 45 | IGCM_card_DefineArrayFromOption ${SUBMIT_DIR}/config.card Executable ${comp} |
---|
| 46 | |
---|
| 47 | # Read component Write Frequency in config.card |
---|
| 48 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/config.card ${comp} WriteFrequency |
---|
| 49 | # Debug Print : |
---|
| 50 | eval auxprint=\${config_${comp}_WriteFrequency} |
---|
| 51 | IGCM_debug_Print 1 "Write frequency for ${compname} : ${auxprint} " |
---|
| 52 | #2> /dev/null |
---|
| 53 | |
---|
| 54 | # Debug Print : |
---|
| 55 | IGCM_debug_Print 1 "Initialize following component library :" |
---|
| 56 | IGCM_debug_Print 1 ${SUBMIT_DIR}/COMP/${compname}.driver |
---|
| 57 | IGCM_debug_Print 3 "With tag : ${comptagname}" |
---|
| 58 | # Source component library |
---|
| 59 | . ${SUBMIT_DIR}/COMP/${compname}.driver |
---|
| 60 | |
---|
| 61 | # Debug Print |
---|
| 62 | IGCM_debug_Print 3 "Initialize ${comp} output directory." |
---|
| 63 | # Define Dirs |
---|
| 64 | eval R_OUT_${comp}=${R_SAVE}/${comp} |
---|
| 65 | eval IGCM_sys_MkdirArchive \${R_OUT_${comp}} |
---|
| 66 | |
---|
| 67 | eval R_OUT_${comp}_O=\${R_OUT_${comp}}/Output |
---|
| 68 | eval IGCM_sys_MkdirArchive \${R_OUT_${comp}_O} |
---|
| 69 | |
---|
| 70 | eval R_OUT_${comp}_R=\${R_OUT_${comp}}/Restart |
---|
| 71 | eval IGCM_sys_MkdirArchive \${R_OUT_${comp}_R} |
---|
| 72 | |
---|
| 73 | eval R_OUT_${comp}_D=\${R_OUT_${comp}}/Debug |
---|
| 74 | eval IGCM_sys_MkdirArchive \${R_OUT_${comp}_D} |
---|
| 75 | |
---|
| 76 | eval R_OUT_${comp}_O_I=\${R_OUT_${comp}_O}/INS |
---|
| 77 | eval R_OUT_${comp}_O_H=\${R_OUT_${comp}_O}/HF |
---|
| 78 | eval R_OUT_${comp}_O_D=\${R_OUT_${comp}_O}/DA |
---|
| 79 | eval R_OUT_${comp}_O_M=\${R_OUT_${comp}_O}/MO |
---|
| 80 | eval R_OUT_${comp}_O_Y=\${R_OUT_${comp}_O}/YE |
---|
| 81 | |
---|
| 82 | |
---|
| 83 | # Read UserChoices section of component card |
---|
| 84 | IGCM_debug_Print 1 "DefineArrayFromOption : ${compname}_UserChoices ${card}" |
---|
| 85 | IGCM_card_DefineArrayFromSection ${card} UserChoices |
---|
| 86 | eval first_option=\${${compname}_UserChoices[0]} > /dev/null 2>&1 |
---|
| 87 | if [ X${first_option} != X"Error:" ] ; then |
---|
| 88 | eval IGCM_debug_Print 2 "${compname}_UserChoices_Options:" \${${compname}_UserChoices[*]} |
---|
| 89 | if [ X${card_UserChoices[0]} != X ] ; then |
---|
| 90 | unset card_UserChoices |
---|
| 91 | fi |
---|
| 92 | eval set +A card_UserChoices -- \${${compname}_UserChoices[*]} > /dev/null 2>&1 |
---|
| 93 | typeset option |
---|
| 94 | for option in ${card_UserChoices[*]} ; do |
---|
| 95 | IGCM_card_DefineVariableFromOption ${card} UserChoices ${option} |
---|
[8] | 96 | eval IGCM_debug_Print 3 "${compname}_UserChoices_values: ${option} \${card_UserChoices_${option}}" |
---|
[2] | 97 | done |
---|
| 98 | fi |
---|
| 99 | |
---|
| 100 | # Debug Print |
---|
| 101 | IGCM_debug_Print 3 "Initialize ${compname} with driver." |
---|
| 102 | # INIT component |
---|
| 103 | ${comp}_Initialize |
---|
| 104 | echo |
---|
| 105 | done |
---|
| 106 | echo "-----" |
---|
| 107 | |
---|
| 108 | echo |
---|
| 109 | IGCM_debug_Print 1 "DefineArrayFromOption : ListOfComponents" |
---|
| 110 | IGCM_debug_PrintVariables 3 config_ListOfComponents |
---|
| 111 | |
---|
| 112 | IGCM_debug_PopStack "IGCM_comp_Initialize" |
---|
| 113 | } |
---|
| 114 | |
---|
| 115 | #======================================================================= |
---|
| 116 | function IGCM_comp_PrepareDeletedFiles |
---|
| 117 | { |
---|
| 118 | IGCM_debug_PushStack "IGCM_comp_PrepareDeletedFiles" $@ |
---|
| 119 | |
---|
| 120 | if [ X${2} != X. ] ; then |
---|
| 121 | eval FileToBeDeleted[${#FileToBeDeleted[@]}]=$( basename ${2} ) > /dev/null 2>&1 |
---|
| 122 | else |
---|
| 123 | eval FileToBeDeleted[${#FileToBeDeleted[@]}]=$( basename ${1} ) > /dev/null 2>&1 |
---|
| 124 | fi |
---|
| 125 | |
---|
| 126 | IGCM_debug_PopStack "IGCM_comp_PrepareDeletedFiles" |
---|
| 127 | } |
---|
| 128 | |
---|
| 129 | #======================================================================= |
---|
| 130 | function IGCM_comp_GetInputInitialStateFiles |
---|
| 131 | { |
---|
| 132 | IGCM_debug_PushStack "IGCM_comp_GetInputInitialStateFiles" |
---|
| 133 | |
---|
| 134 | # Debug Print : |
---|
| 135 | echo |
---|
| 136 | IGCM_debug_Print 1 "IGCM_comp_GetInputInitialStateFiles :" |
---|
| 137 | echo |
---|
| 138 | |
---|
| 139 | # Only the first time step need InitialStateFiles |
---|
| 140 | # otherwise it's BoundaryConditions |
---|
| 141 | if ( ${FirstInitialize} ) ; then |
---|
| 142 | typeset comp compname comptagname card ListFilesName FileName0 NbFiles i i_ |
---|
| 143 | typeset file_in_ file_in file_out_ file_out do_init |
---|
| 144 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 145 | # Initialize |
---|
| 146 | do_init="y" |
---|
| 147 | # Do we need to bring initial state file for this component |
---|
| 148 | if [ "${config_Restarts_OverRule}" = "y" ] ; then |
---|
| 149 | eval do_init="n" |
---|
| 150 | else |
---|
| 151 | # Read component Restarts parameters |
---|
| 152 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/config.card ${comp} Restart |
---|
| 153 | eval do_start=\${config_${comp}_Restart} > /dev/null 2>&1 |
---|
| 154 | if [ "${do_start}" = "y" ] ; then |
---|
| 155 | do_init="n" |
---|
| 156 | else |
---|
| 157 | do_init="y" |
---|
| 158 | fi |
---|
| 159 | fi |
---|
| 160 | |
---|
| 161 | if [ "${do_init}" = "y" ] ; then |
---|
| 162 | # Define component |
---|
| 163 | eval compname=\${config_ListOfComponents_${comp}[0]} > /dev/null 2>&1 |
---|
| 164 | eval comptagname=\${config_ListOfComponents_${comp}[1]} > /dev/null 2>&1 |
---|
| 165 | |
---|
| 166 | # Debug Print : |
---|
| 167 | IGCM_debug_Print 3 "Initialisation files ${compname}" |
---|
| 168 | |
---|
| 169 | card=${SUBMIT_DIR}/COMP/${compname}.card |
---|
| 170 | |
---|
| 171 | IGCM_card_DefineArrayFromOption ${card} InitialStateFiles List |
---|
| 172 | ListFilesName=${compname}_InitialStateFiles_List |
---|
| 173 | |
---|
| 174 | eval FileName0=\${${ListFilesName}[0]} > /dev/null 2>&1 |
---|
| 175 | if [ X${FileName0} != X${NULL_STR} ] ; then |
---|
| 176 | eval NbFiles=\${#${ListFilesName}[@]} > /dev/null 2>&1 |
---|
| 177 | |
---|
| 178 | (( i=0 )) |
---|
| 179 | until [ $i -ge $NbFiles ]; do |
---|
| 180 | eval file_in_=\${${ListFilesName}[$i]} > /dev/null 2>&1 |
---|
| 181 | eval file_in=${file_in_} |
---|
| 182 | (( i_ = i+1 )) |
---|
| 183 | eval file_out_=\${${ListFilesName}[$i_]} > /dev/null 2>&1 |
---|
| 184 | eval file_out=${file_out_} |
---|
| 185 | |
---|
| 186 | IGCM_sys_Get ${file_in} ${file_out} |
---|
| 187 | |
---|
| 188 | IGCM_comp_PrepareDeletedFiles ${file_in} ${file_out} |
---|
| 189 | |
---|
| 190 | (( i=i+2 )) |
---|
| 191 | done |
---|
| 192 | fi |
---|
| 193 | fi |
---|
| 194 | done |
---|
| 195 | fi |
---|
| 196 | IGCM_debug_PopStack "IGCM_comp_GetInputInitialStateFiles" |
---|
| 197 | } |
---|
| 198 | |
---|
| 199 | #======================================================================= |
---|
[8] | 200 | # Definition of Smooth modulo function |
---|
| 201 | # usage : |
---|
| 202 | # IGCM_SmoothModulo StringModulo value |
---|
| 203 | # |
---|
| 204 | # StringModulo : A string of min max and modulo like definition of Scilab vectors. |
---|
| 205 | # [min]:[modulo:][max] |
---|
| 206 | # where : |
---|
| 207 | # [] value are optionnals; |
---|
| 208 | # empty min equal 1 |
---|
| 209 | # empty max equal infinity |
---|
| 210 | # modulo not given or empty equal 1 |
---|
| 211 | # empty string or just ':' equal always. |
---|
| 212 | # |
---|
| 213 | # value : the value to test with the definition |
---|
| 214 | # |
---|
| 215 | # return : true(1)/false(0) |
---|
| 216 | function IGCM_SmoothModulo |
---|
| 217 | { |
---|
| 218 | IGCM_debug_PushStack "IGCM_SmoothModulo" |
---|
| 219 | typeset defVector ModValue |
---|
| 220 | |
---|
| 221 | eval set +A defVector -- $( echo "${1}" | \ |
---|
| 222 | awk -F ':' '{print ($1 == "" ? 1 : $1) " " (NF==3 ? ($2 == "" ? 1 : $2) : 1) " " (NF==3 ? ($3 == "" ? -1 : $3) : ($2 == "" ? -1 : $2))}' ) |
---|
| 223 | |
---|
| 224 | # Test limits : |
---|
| 225 | # ${defVector[0]} <= ${2} <= ${defVector[2]} |
---|
| 226 | # or ${defVector[2]} == -1 |
---|
| 227 | if ( [ ${2} -ge ${defVector[0]} ] && \ |
---|
| 228 | ( [ ${2} -le ${defVector[2]} ] || \ |
---|
| 229 | [ ${defVector[2]} -lt 0 ] ) ) ; then |
---|
| 230 | |
---|
| 231 | # Test modulo |
---|
| 232 | ModValue=$( expr \( ${2} - ${defVector[0]} \) % ${defVector[1]} ) |
---|
| 233 | if [ ${ModValue} -eq 0 ] ; then |
---|
| 234 | echo true |
---|
| 235 | IGCM_debug_PopStack "IGCM_SmoothModulo" |
---|
| 236 | return 1 |
---|
| 237 | else |
---|
| 238 | echo false |
---|
| 239 | IGCM_debug_PopStack "IGCM_SmoothModulo" |
---|
| 240 | return 0 |
---|
| 241 | fi |
---|
| 242 | else |
---|
| 243 | echo false |
---|
| 244 | IGCM_debug_PopStack "IGCM_SmoothModulo" |
---|
| 245 | return 0 |
---|
| 246 | fi |
---|
| 247 | } |
---|
| 248 | |
---|
| 249 | #======================================================================= |
---|
| 250 | function IGCM_comp_GetInputSmoothFiles |
---|
| 251 | { |
---|
| 252 | IGCM_debug_PushStack "IGCM_comp_GetInputSmoothFiles" |
---|
| 253 | |
---|
| 254 | # Debug Print : |
---|
| 255 | echo |
---|
| 256 | IGCM_debug_Print 1 "IGCM_comp_GetInputSmoothFiles :" |
---|
| 257 | echo |
---|
| 258 | |
---|
| 259 | typeset comp compname comptagname card ListFilesName FileName0 NbFiles i i_ i__ |
---|
| 260 | typeset file_in_ file_in file_out_ file_out ret SmoothDef |
---|
| 261 | |
---|
| 262 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 263 | |
---|
| 264 | echo "-----" |
---|
| 265 | # Define component |
---|
| 266 | eval compname=\${config_ListOfComponents_${comp}[0]} > /dev/null 2>&1 |
---|
| 267 | eval comptagname=\${config_ListOfComponents_${comp}[1]} > /dev/null 2>&1 |
---|
| 268 | |
---|
| 269 | # Debug Print : |
---|
| 270 | IGCM_debug_Print 3 "Smooth files ${compname}" |
---|
| 271 | |
---|
| 272 | card=${SUBMIT_DIR}/COMP/${compname}.card |
---|
| 273 | |
---|
| 274 | IGCM_card_DefineArrayFromOption ${card} SmoothFiles List |
---|
| 275 | ListFilesName=${compname}_SmoothFiles_List |
---|
| 276 | eval FileName0=\${${ListFilesName}[0]} > /dev/null 2>&1 |
---|
| 277 | |
---|
| 278 | if [ X${FileName0} != X${NULL_STR} ] ; then |
---|
| 279 | eval NbFiles=\${#${ListFilesName}[@]} > /dev/null 2>&1 |
---|
| 280 | |
---|
| 281 | (( i=0 )) |
---|
| 282 | until [ $i -ge $NbFiles ]; do |
---|
| 283 | |
---|
| 284 | eval file_in_=\${${ListFilesName}[$i]} > /dev/null 2>&1 |
---|
| 285 | eval file_in=${file_in_} |
---|
| 286 | (( i_ = i+1 )) |
---|
| 287 | eval file_out_=\${${ListFilesName}[$i_]} > /dev/null 2>&1 |
---|
| 288 | eval file_out=${file_out_} |
---|
| 289 | |
---|
| 290 | # define CumulPeriod definition for this file |
---|
| 291 | (( i__ = i+2 )) |
---|
| 292 | eval SmoothDef=\${${ListFilesName}[$i__]} |
---|
| 293 | IGCM_debug_Print 3 " ${file_in} ${SmoothDef}" |
---|
| 294 | eval ret=$( IGCM_SmoothModulo ${SmoothDef} ${CumulPeriod} ) |
---|
| 295 | if [ X${ret} = Xtrue ] ; then |
---|
| 296 | IGCM_sys_Get ${file_in} ${file_out} |
---|
| 297 | |
---|
| 298 | IGCM_comp_PrepareDeletedFiles ${file_in} ${file_out} |
---|
| 299 | fi |
---|
| 300 | (( i=i+3 )) |
---|
| 301 | done |
---|
| 302 | fi |
---|
| 303 | done |
---|
| 304 | |
---|
| 305 | IGCM_debug_PopStack "IGCM_comp_GetInputSmoothFiles" |
---|
| 306 | } |
---|
| 307 | |
---|
| 308 | #======================================================================= |
---|
[2] | 309 | function IGCM_comp_GetInputBoundaryFiles |
---|
| 310 | { |
---|
| 311 | IGCM_debug_PushStack "IGCM_comp_GetInputBoundaryFiles" |
---|
| 312 | |
---|
| 313 | # Debug Print : |
---|
| 314 | echo |
---|
| 315 | IGCM_debug_Print 1 "IGCM_comp_GetInputBoundaryFiles :" |
---|
| 316 | echo |
---|
| 317 | |
---|
| 318 | typeset comp compname comptagname card ListFilesName FileName0 NbFiles i i_ |
---|
| 319 | typeset file_in_ file_in file_out_ file_out |
---|
| 320 | |
---|
| 321 | if [ ${Period} = 1 ]; then |
---|
| 322 | ListFixBoundary=" " |
---|
| 323 | fi |
---|
| 324 | |
---|
| 325 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 326 | |
---|
| 327 | echo "-----" |
---|
| 328 | # Define component |
---|
| 329 | eval compname=\${config_ListOfComponents_${comp}[0]} > /dev/null 2>&1 |
---|
| 330 | eval comptagname=\${config_ListOfComponents_${comp}[1]} > /dev/null 2>&1 |
---|
| 331 | |
---|
| 332 | # Debug Print : |
---|
| 333 | IGCM_debug_Print 3 "Boundary files ${compname}" |
---|
| 334 | |
---|
| 335 | card=${SUBMIT_DIR}/COMP/${compname}.card |
---|
| 336 | |
---|
| 337 | IGCM_card_DefineArrayFromOption ${card} BoundaryFiles List |
---|
| 338 | ListFilesName=${compname}_BoundaryFiles_List |
---|
| 339 | eval FileName0=\${${ListFilesName}[0]} > /dev/null 2>&1 |
---|
| 340 | |
---|
| 341 | if [ X${FileName0} != X${NULL_STR} ] ; then |
---|
| 342 | eval NbFiles=\${#${ListFilesName}[@]} > /dev/null 2>&1 |
---|
| 343 | |
---|
| 344 | (( i=0 )) |
---|
| 345 | until [ $i -ge $NbFiles ]; do |
---|
| 346 | eval file_in_=\${${ListFilesName}[$i]} > /dev/null 2>&1 |
---|
| 347 | eval file_in=${file_in_} |
---|
| 348 | (( i_ = i+1 )) |
---|
| 349 | eval file_out_=\${${ListFilesName}[$i_]} > /dev/null 2>&1 |
---|
| 350 | eval file_out=${file_out_} |
---|
| 351 | |
---|
| 352 | IGCM_sys_Get ${file_in} ${file_out} |
---|
| 353 | |
---|
| 354 | IGCM_comp_PrepareDeletedFiles ${file_in} ${file_out} |
---|
| 355 | |
---|
| 356 | (( i=i+2 )) |
---|
| 357 | done |
---|
| 358 | fi |
---|
| 359 | |
---|
| 360 | # Get non deleted files |
---|
| 361 | if [ ${Period} = 1 ]; then |
---|
| 362 | |
---|
| 363 | IGCM_card_DefineArrayFromOption ${card} BoundaryFiles ListNonDel |
---|
| 364 | ListFilesName=${compname}_BoundaryFiles_ListNonDel |
---|
| 365 | eval FileName0=\${${ListFilesName}[0]} > /dev/null 2>&1 |
---|
| 366 | |
---|
| 367 | if [ X${FileName0} != X${NULL_STR} ] ; then |
---|
| 368 | eval NbFiles=\${#${ListFilesName}[@]} > /dev/null 2>&1 |
---|
| 369 | |
---|
| 370 | (( i=0 )) |
---|
| 371 | until [ $i -ge $NbFiles ]; do |
---|
| 372 | eval file_in_=\${${ListFilesName}[$i]} > /dev/null 2>&1 |
---|
| 373 | eval file_in=${file_in_} |
---|
| 374 | (( i_ = i+1 )) |
---|
| 375 | eval file_out_=\${${ListFilesName}[$i_]} > /dev/null 2>&1 |
---|
| 376 | eval file_out=${file_out_} |
---|
| 377 | |
---|
| 378 | IGCM_sys_Get ${file_in} ${file_out} |
---|
| 379 | |
---|
| 380 | if [ X${file_out} != X. ] ; then |
---|
| 381 | ListFixBoundary=${ListFixBoundary}" "${file_out} |
---|
| 382 | else |
---|
| 383 | ListFixBoundary=${ListFixBoundary}" "$( basename ${file_in} ) |
---|
| 384 | fi |
---|
| 385 | |
---|
| 386 | (( i=i+2 )) |
---|
| 387 | done |
---|
| 388 | fi |
---|
| 389 | fi |
---|
| 390 | done |
---|
| 391 | |
---|
| 392 | IGCM_debug_PopStack "IGCM_comp_GetInputBoundaryFiles" |
---|
| 393 | } |
---|
| 394 | |
---|
| 395 | #======================================================================= |
---|
| 396 | function IGCM_comp_DelFixeBoundaryFiles |
---|
| 397 | { |
---|
| 398 | IGCM_debug_PushStack "IGCM_comp_DelFixeBoundaryFiles" |
---|
| 399 | |
---|
| 400 | # Debug Print : |
---|
| 401 | echo |
---|
| 402 | IGCM_debug_Print 1 "IGCM_comp_DelFixeBoundaryFiles :" |
---|
| 403 | echo |
---|
| 404 | |
---|
| 405 | ls -l ${ListFixBoundary} |
---|
| 406 | rm -f ${ListFixBoundary} |
---|
| 407 | |
---|
| 408 | IGCM_debug_PopStack "IGCM_comp_DelFixeBoundaryFiles" |
---|
| 409 | } |
---|
| 410 | |
---|
| 411 | #======================================================================= |
---|
| 412 | function IGCM_comp_GetInputParametersFiles |
---|
| 413 | { |
---|
| 414 | IGCM_debug_PushStack "IGCM_comp_GetInputParametersFiles" |
---|
| 415 | |
---|
| 416 | # Debug Print : |
---|
| 417 | echo |
---|
| 418 | IGCM_debug_Print 1 "IGCM_comp_GetInputParametersFiles :" |
---|
| 419 | echo |
---|
| 420 | |
---|
| 421 | typeset comp compname comptagname card ListFilesName FileName0 NbFiles i i_ file_in file_out |
---|
| 422 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 423 | # Define component |
---|
| 424 | eval compname=\${config_ListOfComponents_${comp}[0]} > /dev/null 2>&1 |
---|
| 425 | eval comptagname=\${config_ListOfComponents_${comp}[1]} > /dev/null 2>&1 |
---|
| 426 | |
---|
| 427 | # Debug Print : |
---|
| 428 | IGCM_debug_Print 3 "Parameters ${compname}" |
---|
| 429 | |
---|
| 430 | card=${SUBMIT_DIR}/COMP/${compname}.card |
---|
| 431 | |
---|
| 432 | IGCM_card_DefineArrayFromOption ${card} ParametersFiles List |
---|
| 433 | ListFilesName=${compname}_ParametersFiles_List |
---|
| 434 | eval FileName0=\${${ListFilesName}[0]} > /dev/null 2>&1 |
---|
| 435 | |
---|
| 436 | if [ X${FileName0} != X${NULL_STR} ] ; then |
---|
| 437 | eval NbFiles=\${#${ListFilesName}[@]} > /dev/null 2>&1 |
---|
| 438 | |
---|
| 439 | (( i=0 )) |
---|
| 440 | until [ $i -ge $NbFiles ]; do |
---|
| 441 | eval file_in_=\${${ListFilesName}[$i]} > /dev/null 2>&1 |
---|
| 442 | eval file_in=${file_in_} |
---|
| 443 | (( i_ = i+1 )) |
---|
| 444 | eval file_out_=\${${ListFilesName}[$i_]} > /dev/null 2>&1 |
---|
| 445 | eval file_out=${file_out_} |
---|
| 446 | |
---|
| 447 | IGCM_sys_Cp ${file_in} ${file_out} |
---|
| 448 | |
---|
| 449 | IGCM_comp_PrepareDeletedFiles ${file_in} ${file_out} |
---|
| 450 | |
---|
| 451 | (( i=i+2 )) |
---|
| 452 | done |
---|
| 453 | fi |
---|
| 454 | done |
---|
| 455 | |
---|
| 456 | IGCM_debug_PopStack "IGCM_comp_GetInputParametersFiles" |
---|
| 457 | } |
---|
| 458 | |
---|
| 459 | #======================================================================= |
---|
| 460 | function IGCM_comp_GetInputRestartFiles |
---|
| 461 | { |
---|
| 462 | IGCM_debug_PushStack "IGCM_comp_GetInputRestartFiles" |
---|
| 463 | |
---|
| 464 | # Debug Print : |
---|
| 465 | echo |
---|
| 466 | IGCM_debug_Print 1 "IGCM_comp_GetInputRestartFiles :" |
---|
| 467 | echo |
---|
| 468 | |
---|
| 469 | typeset Date_tmp Date_r Path_r do_start CompOldName |
---|
| 470 | typeset comp compname comptagname card ListFilesName FileName0 NbFiles i i_ |
---|
| 471 | typeset file_in file_out file_in_ file_out_ file_in_Name |
---|
| 472 | |
---|
| 473 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 474 | # Define component |
---|
| 475 | eval compname=\${config_ListOfComponents_${comp}[0]} > /dev/null 2>&1 |
---|
| 476 | eval comptagname=\${config_ListOfComponents_${comp}[1]} > /dev/null 2>&1 |
---|
| 477 | |
---|
| 478 | # Debug Print : |
---|
| 479 | IGCM_debug_Print 3 "restart ${compname}" |
---|
| 480 | |
---|
| 481 | card=${SUBMIT_DIR}/COMP/${compname}.card |
---|
| 482 | |
---|
| 483 | if ( ${FirstInitialize} ) ; then |
---|
| 484 | |
---|
| 485 | if [ "${config_Restarts_OverRule}" = "y" ] ; then |
---|
| 486 | eval config_${comp}_Restart="y" |
---|
| 487 | eval config_${comp}_RestartDate=${config_Restarts_RestartDate} |
---|
| 488 | eval config_${comp}_RestartJobName=${config_Restarts_RestartJobName} |
---|
| 489 | eval config_${comp}_RestartPath=${config_Restarts_RestartPath} |
---|
| 490 | eval do_start=\${config_${comp}_Restart} > /dev/null 2>&1 |
---|
| 491 | eval CompOldName=${comp} |
---|
| 492 | else |
---|
| 493 | # Read component Restarts parameters |
---|
| 494 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/config.card ${comp} Restart |
---|
| 495 | eval do_start=\${config_${comp}_Restart} > /dev/null 2>&1 |
---|
| 496 | |
---|
| 497 | if [ "${do_start}" = "y" ] ; then |
---|
| 498 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/config.card ${comp} RestartDate |
---|
| 499 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/config.card ${comp} RestartJobName |
---|
| 500 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/config.card ${comp} RestartPath |
---|
| 501 | else |
---|
| 502 | eval config_${comp}_RestartDate=-1 |
---|
| 503 | eval config_${comp}_RestartJobName=${NULL_STR} |
---|
| 504 | eval config_${comp}_RestartPath=${NULL_STR} |
---|
| 505 | fi |
---|
| 506 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/config.card ${comp} OldName |
---|
| 507 | eval CompOldName=\${config_${comp}_OldName} |
---|
| 508 | if [ X${CompOldName} = X ] ; then |
---|
| 509 | eval CompOldName=${comp} |
---|
| 510 | fi |
---|
| 511 | fi |
---|
| 512 | |
---|
| 513 | if [ "${do_start}" = "y" ] ; then |
---|
| 514 | |
---|
| 515 | IGCM_card_DefineArrayFromOption ${card} RestartFiles List |
---|
| 516 | ListFilesName=${compname}_RestartFiles_List |
---|
| 517 | eval FileName0=\${${ListFilesName}[0]} > /dev/null 2>&1 |
---|
| 518 | |
---|
| 519 | if ( [ X${FileName0} != X${NULL_STR} ] && [ X${FileName0} != XNONE ] ) ; then |
---|
| 520 | eval NbFiles=\${#${ListFilesName}[@]} > /dev/null 2>&1 |
---|
| 521 | |
---|
| 522 | (( i=1 )) |
---|
| 523 | until [ $i -gt $NbFiles ]; do |
---|
| 524 | eval file_in_=\${${ListFilesName}[$i]} > /dev/null 2>&1 |
---|
| 525 | eval file_in=${file_in_} |
---|
| 526 | |
---|
| 527 | (( i_ = i+1 )) |
---|
| 528 | eval file_out_=\${${ListFilesName}[$i_]} > /dev/null 2>&1 |
---|
| 529 | eval file_out=${file_out_} |
---|
| 530 | |
---|
| 531 | eval Date_tmp=\${config_${comp}_RestartDate} |
---|
| 532 | Date_r=$( IGCM_date_ConvertFormatToGregorian ${Date_tmp} ) |
---|
| 533 | eval Path_r=\${config_${comp}_RestartPath}/\${config_${comp}_RestartJobName}/${CompOldName}/Restart |
---|
| 534 | eval file_in_Name=\${config_${comp}_RestartJobName}_${Date_r}_${file_in} |
---|
| 535 | |
---|
| 536 | eval IGCM_sys_Get ${Path_r}/${file_in_Name} ${file_out} |
---|
| 537 | |
---|
| 538 | IGCM_comp_PrepareDeletedFiles ${file_in} ${file_out} |
---|
| 539 | |
---|
| 540 | (( i=i+3 )) |
---|
| 541 | done |
---|
| 542 | else |
---|
| 543 | if [ X${FileName0} != XNONE ] ; then |
---|
| 544 | IGCM_debug_Exit "IGCM_comp_GetInputRestartFiles : No file in list for ${compname}." |
---|
| 545 | else |
---|
| 546 | IGCM_debug_Print 1 "IGCM_comp_GetInputRestartFiles : NONE specified in Restart List ${compname}." |
---|
| 547 | fi |
---|
| 548 | fi |
---|
| 549 | fi |
---|
| 550 | else |
---|
| 551 | # if not FirstInitialize |
---|
| 552 | |
---|
| 553 | # Restore Restarts files |
---|
| 554 | #----------------------- |
---|
| 555 | IGCM_card_DefineArrayFromOption ${card} RestartFiles List |
---|
| 556 | ListFilesName=${compname}_RestartFiles_List |
---|
| 557 | eval FileName0=\${${ListFilesName}[0]} > /dev/null 2>&1 |
---|
| 558 | |
---|
| 559 | if ( [ X${FileName0} != X${NULL_STR} ] && [ X${FileName0} != XNONE ] ) ; then |
---|
| 560 | eval NbFiles=\${#${ListFilesName}[@]} > /dev/null 2>&1 |
---|
| 561 | |
---|
| 562 | (( i=1 )) |
---|
| 563 | until [ $i -gt $NbFiles ]; do |
---|
| 564 | eval file_in_=\${${ListFilesName}[$i]} > /dev/null 2>&1 |
---|
| 565 | eval file_in=${file_in_} |
---|
| 566 | (( i_ = i+1 )) |
---|
| 567 | eval file_out_=\${${ListFilesName}[$i_]} > /dev/null 2>&1 |
---|
| 568 | eval file_out=${file_out_} |
---|
| 569 | |
---|
| 570 | file_in_Name=${run_Configuration_OldPrefix}_${file_in} |
---|
| 571 | eval IGCM_sys_Get \${R_OUT_${comp}_R}/${file_in_Name} ${file_out} |
---|
| 572 | |
---|
| 573 | IGCM_comp_PrepareDeletedFiles ${file_in} ${file_out} |
---|
| 574 | |
---|
| 575 | (( i=i+3 )) |
---|
| 576 | done |
---|
| 577 | else |
---|
| 578 | if [ X${FileName0} != XNONE ] ; then |
---|
| 579 | IGCM_debug_Exit "IGCM_comp_GetInputRestartFiles : No file in list for ${compname}." |
---|
| 580 | else |
---|
| 581 | IGCM_debug_Print 1 "IGCM_comp_GetInputRestartFiles : NONE specified in Restart List ${compname}." |
---|
| 582 | fi |
---|
| 583 | fi |
---|
| 584 | fi |
---|
| 585 | done |
---|
| 586 | IGCM_sys_Chmod -R u+rw . |
---|
| 587 | |
---|
| 588 | IGCM_debug_PopStack "IGCM_comp_GetInputRestartFiles" |
---|
| 589 | } |
---|
| 590 | |
---|
| 591 | #======================================================================= |
---|
| 592 | function IGCM_comp_Update |
---|
| 593 | { |
---|
| 594 | IGCM_debug_PushStack "IGCM_comp_Update" |
---|
| 595 | |
---|
| 596 | # Debug Print : |
---|
| 597 | echo |
---|
| 598 | IGCM_debug_Print 1 "IGCM_comp_Update :" |
---|
| 599 | echo |
---|
| 600 | |
---|
| 601 | typeset ExeNameIn ExeNameOut |
---|
| 602 | typeset comp compname comptagname |
---|
| 603 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 604 | # Define component |
---|
| 605 | eval compname=\${config_ListOfComponents_${comp}[0]} > /dev/null 2>&1 |
---|
| 606 | eval comptagname=\${config_ListOfComponents_${comp}[1]} > /dev/null 2>&1 |
---|
| 607 | |
---|
| 608 | # Copy executable for this component |
---|
| 609 | eval ExeNameIn=\${config_Executable_${comp}[0]} |
---|
| 610 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
| 611 | if [ -f ${R_EXE}/${ExeNameIn} ] ; then |
---|
| 612 | eval IGCM_sys_Cp ${R_EXE}/${ExeNameIn} ${ExeNameOut} |
---|
| 613 | if [ -f ${RUN_DIR}/${ExeNameOut} ] ; then |
---|
| 614 | eval IGCM_sys_Chmod +rx ${RUN_DIR}/${ExeNameOut} |
---|
| 615 | fi |
---|
| 616 | fi |
---|
| 617 | |
---|
| 618 | # Debug Print |
---|
| 619 | IGCM_debug_Print 3 "Update ${compname} Parameter Files." |
---|
| 620 | # UPDATE component |
---|
| 621 | ${comp}_Update |
---|
| 622 | |
---|
| 623 | done |
---|
| 624 | |
---|
| 625 | IGCM_debug_PopStack "IGCM_comp_Update" |
---|
| 626 | } |
---|
| 627 | |
---|
| 628 | #======================================================================= |
---|
| 629 | function IGCM_comp_Finalize |
---|
| 630 | { |
---|
| 631 | IGCM_debug_PushStack "IGCM_comp_Finalize" |
---|
| 632 | |
---|
| 633 | # Debug Print : |
---|
| 634 | echo |
---|
| 635 | IGCM_debug_Print 1 "IGCM_comp_Finalize :" |
---|
| 636 | echo |
---|
| 637 | |
---|
| 638 | typeset ListTextName TextName0 |
---|
| 639 | typeset comp compname comptagname card ListFilesName FileName0 NbFiles |
---|
| 640 | typeset i i_ file_in file_in_ file_out file_out_ generic_file_name nb_rebuild_file |
---|
| 641 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 642 | # Define component |
---|
| 643 | eval compname=\${config_ListOfComponents_${comp}[0]} > /dev/null 2>&1 |
---|
| 644 | eval comptagname=\${config_ListOfComponents_${comp}[1]} > /dev/null 2>&1 |
---|
| 645 | |
---|
| 646 | # Debug Print |
---|
| 647 | IGCM_debug_Print 1 "Finalize ${compname} component." |
---|
| 648 | # FINALIZE component |
---|
| 649 | ${comp}_Finalize |
---|
| 650 | |
---|
| 651 | card=${SUBMIT_DIR}/COMP/${compname}.card |
---|
| 652 | |
---|
| 653 | # Save Restarts files |
---|
| 654 | #-------------------- |
---|
| 655 | IGCM_card_DefineArrayFromOption ${card} RestartFiles List |
---|
| 656 | ListFilesName=${compname}_RestartFiles_List |
---|
| 657 | eval FileName0=\${${ListFilesName}[0]} > /dev/null 2>&1 |
---|
| 658 | |
---|
| 659 | if ( [ X${FileName0} != X${NULL_STR} ] && [ X${FileName0} != XNONE ] ) ; then |
---|
| 660 | eval NbFiles=\${#${ListFilesName}[@]} > /dev/null 2>&1 |
---|
| 661 | |
---|
| 662 | (( i=0 )) |
---|
| 663 | until [ $i -ge $NbFiles ]; do |
---|
| 664 | eval file_in_=\${${ListFilesName}[$i]} > /dev/null 2>&1 |
---|
| 665 | eval file_in=${file_in_} |
---|
| 666 | |
---|
| 667 | (( i_ = i+1 )) |
---|
| 668 | eval file_out_=\${${ListFilesName}[$i_]} > /dev/null 2>&1 |
---|
| 669 | eval file_out=${file_out_} |
---|
| 670 | |
---|
| 671 | eval IGCM_sys_Put_Rest ${file_in} \${R_OUT_${comp}_R}/${config_UserChoices_JobName}_${PeriodDateEnd}_${file_out} |
---|
| 672 | |
---|
| 673 | eval FileToBeDeleted[${#FileToBeDeleted[@]}]="${file_in}" > /dev/null 2>&1 |
---|
| 674 | |
---|
| 675 | (( i=i+3 )) |
---|
| 676 | done |
---|
| 677 | else |
---|
| 678 | if [ X${FileName0} != XNONE ] ; then |
---|
| 679 | IGCM_debug_Exit "IGCM_comp_Finalize : No file in restart list for ${compname}." |
---|
| 680 | else |
---|
| 681 | IGCM_debug_Print 1 "IGCM_comp_Finalize : NONE specified in Restart List ${compname}." |
---|
| 682 | fi |
---|
| 683 | fi |
---|
| 684 | |
---|
| 685 | # Save Output files |
---|
| 686 | #------------------ |
---|
| 687 | IGCM_card_DefineArrayFromOption ${card} OutputFiles List |
---|
| 688 | ListFilesName=${compname}_OutputFiles_List |
---|
| 689 | eval FileName0=\${${ListFilesName}[0]} > /dev/null 2>&1 |
---|
| 690 | |
---|
| 691 | if [ X${FileName0} != X${NULL_STR} ] ; then |
---|
| 692 | eval NbFiles=\${#${ListFilesName}[@]} > /dev/null 2>&1 |
---|
| 693 | |
---|
| 694 | (( i=0 )) |
---|
| 695 | until [ $i -ge $NbFiles ]; do |
---|
| 696 | eval file_in_=\${${ListFilesName}[$i]} > /dev/null 2>&1 |
---|
| 697 | eval file_in=${file_in_} |
---|
| 698 | (( i_ = i+1 )) |
---|
| 699 | eval file_out_=\${${ListFilesName}[$i_]} > /dev/null 2>&1 |
---|
| 700 | eval file_out=${file_out_} |
---|
| 701 | |
---|
| 702 | generic_file_name=$( basename ${file_in} .nc ) |
---|
| 703 | nb_rebuild_file=$( ls | grep "${generic_file_name}[_0-9]*.nc" | wc -l ) |
---|
| 704 | if [ ${nb_rebuild_file} -gt 1 ] ; then |
---|
| 705 | IGCM_debug_Print 2 "Rebuilding ${file_in}" |
---|
| 706 | IGCM_sys_rebuild ${file_in} ${generic_file_name}_*.nc |
---|
| 707 | # DEBUG Rebuild : |
---|
| 708 | #eval IGCM_sys_Cp ${generic_file_name}_*.nc \${R_OUT_${comp}_O_M}/ |
---|
| 709 | elif [ -f ${generic_file_name}_0000.nc ] ; then |
---|
| 710 | IGCM_sys_Mv ${generic_file_name}_0000.nc ${file_in} |
---|
| 711 | fi |
---|
| 712 | |
---|
| 713 | IGCM_sys_Put_Out ${file_in} ${file_out} |
---|
| 714 | if [ $? -eq 0 ] ; then |
---|
| 715 | eval FileToBeDeleted[${#FileToBeDeleted[@]}]="${file_in}" > /dev/null 2>&1 |
---|
| 716 | if [ ${nb_rebuild_file} -gt 1 ] ; then |
---|
| 717 | eval FileToBeDeleted[${#FileToBeDeleted[@]}]=$( ls | grep "${generic_file_name}_[0-9]*.nc" ) > /dev/null 2>&1 |
---|
| 718 | fi |
---|
| 719 | fi |
---|
| 720 | (( i=i+3 )) |
---|
| 721 | done |
---|
| 722 | fi |
---|
| 723 | |
---|
| 724 | # Save Output Text files of models |
---|
| 725 | #--------------------------------- |
---|
| 726 | |
---|
| 727 | IGCM_card_DefineArrayFromOption ${card} OutputText List |
---|
| 728 | ListTextName=${compname}_OutputText_List |
---|
| 729 | |
---|
| 730 | eval TextName0=\${${ListTextName}[0]} > /dev/null 2>&1 |
---|
| 731 | if [ X${TextName0} != X${NULL_STR} ] ; then |
---|
| 732 | eval NbFiles=\${#${ListTextName}[@]} > /dev/null 2>&1 |
---|
| 733 | |
---|
| 734 | (( i=0 )) |
---|
| 735 | until [ $i -eq $NbFiles ]; do |
---|
| 736 | eval file_in=\${${ListTextName}[$i]} > /dev/null 2>&1 |
---|
| 737 | (( i=i+1 )) |
---|
| 738 | |
---|
| 739 | nb_text_file=$( ls ${file_in}* 2>/dev/null | wc -l ) |
---|
| 740 | if [ ${nb_text_file} -gt 1 ] ; then |
---|
| 741 | list_file=$( ls ${file_in}* ) |
---|
| 742 | for file in ${list_file} |
---|
| 743 | do |
---|
| 744 | eval IGCM_sys_Put_Out ${file} \${R_OUT_${comp}_D}/${PREFIX}_${file} |
---|
| 745 | eval FileToBeDeleted[${#FileToBeDeleted[@]}]="${file}" > /dev/null 2>&1 |
---|
| 746 | done |
---|
| 747 | else |
---|
| 748 | if ( [ -f ${file_in}_0000 ] || [ -f ${file_in}0 ] ) ; then |
---|
| 749 | eval IGCM_sys_Mv ${file_in}* ${file_in} |
---|
| 750 | fi |
---|
| 751 | eval IGCM_sys_Put_Out ${file_in} \${R_OUT_${comp}_D}/${PREFIX}_${file_in} |
---|
| 752 | eval FileToBeDeleted[${#FileToBeDeleted[@]}]="${file_in}" > /dev/null 2>&1 |
---|
| 753 | fi |
---|
| 754 | done |
---|
| 755 | fi |
---|
| 756 | done |
---|
| 757 | |
---|
| 758 | IGCM_debug_PopStack "IGCM_comp_Finalize" |
---|
| 759 | } |
---|