Changes between Version 26 and Version 27 of Doc/ComputingCenters/SharedFiles
- Timestamp:
- 10/10/19 15:17:26 (5 years ago)
Legend:
- Unmodified
- Added
- Removed
- Modified
-
Doc/ComputingCenters/SharedFiles
v26 v27 21 21 ## General environment ## 22 22 23 On the `$HOME` of each common account you will find an executable to properly setup the environment which will allow you to use the IPSL models and tools. Loading modules and specifying `${PATH}` for the basic softwares (compilers, libraries, post processing tools, etc...) The environment file has different versions. Its general name is `.atlas_env_[machine]_[bash|ksh|csh]`. 24 25 For example (note the period at the beginning of the name) : 26 {{{ 27 #!sh 28 .atlas_env_asterix_bash # To use if your connection shell is bash 29 .atlas_env_asterix_ksh # To use if your connection shell is ksh. 30 .atlas_env_asterix_csh # To use if your connection shell is csh or tcsh 31 }}} 32 33 If the file `_bash` does not exist, use the file `_ksh`. 34 23 On the `$WORK` of each common account you will find a directory !MachineEnvironment with one subdirectory by Computing Centers. In each of them there are files to help you to properly setup the environment which will allow you to use the IPSL models and tools on this specific Computing Center. 24 [[BR]] 25 Read the web page of a specific computing center to know how install your environment 26 * [wiki:Doc/ComputingCenters/TGCC TGCC] 27 * [wiki:Doc/ComputingCenters/IDRIS IDRIS] 28 * [wiki:Doc/ComputingCenters/LSCE LSCE] 29 * [wiki:Doc/ComputingCenters/IPSL IPSL(Ciclad)] 30 * 35 31 36 32 ## Rebuild ## 37 33 38 When the model is in parallel mode and the parallel I/O are not activated , the outputs are truncated into different files (one per MPI process), each of them only containing part of the computation domain. The rebuild phase allows to reconstruct the complete file covering the whole domain.34 When the model is in parallel mode and the parallel I/O are not activated (working without XIOS server), the outputs are truncated into different files (one per MPI process), each of them only containing part of the computation domain. The rebuild phase allows to reconstruct the complete file covering the whole domain. 39 35 40 36 The rebuild tools are used by the IPSL models in the post-processing phase. The rebuild can also be done interactively. 41 37 42 38 Tools are stored : 43 * at ada : /linkhome/rech/psl/rpsl035/bin44 * at curie : /ccc/cont003/home/dsm/p86ipsl/rebuild/src_X64_CURIE/modipsl_v2_2_2_netcdf4.2/bin45 * at obelix : /home/users/igcmg/rebuild/bin39 * at irene : 40 * at obelix : 41 * at jean zay : 46 42 47 43 … … 50 46 The fast and atlas tools used by the post processing are also stored on a shared space. Others files required by fast and atlas are stored in database directory. 51 47 52 * At TGCC: in `~p86ipsl/atlas`, `~p86ipsl/fast` and `ccc_home -W -u p86ipsl/database`53 * At IDRIS: in `~rpsl035/atlas`, `~rpsl035/fast` and `${WORKDIR_OF_RPSL035}/database`48 * At TGCC: 49 * At IDRIS: 54 50 55 51 # Repository for shared files #