Changeset 777 for CONFIG/IPSLCM/IPSLCM5/branches/IPSLCM5_v2/EXP00

Timestamp:

11/04/09 11:32:11 (15 years ago)

Author:

mafoipsl

Message:

iomput added in NEMO. First guess for larger tests.

Location:

CONFIG/IPSLCM/IPSLCM5/branches/IPSLCM5_v2/EXP00

Files:

• COMP/lim2.card (modified) (1 diff)
• COMP/lim2.card.noiomput (copied) (copied from CONFIG/IPSLCM/IPSLCM5/branches/IPSLCM5_v2/EXP00/COMP/lim2.card)
• COMP/opa9.card (modified) (4 diffs)
• COMP/opa9.card.noiomput (copied) (copied from CONFIG/IPSLCM/IPSLCM5/branches/IPSLCM5_v2/EXP00/COMP/opa9.card)
• COMP/opa9.driver (modified) (5 diffs)
• COMP/opa9.driver.noiomput (copied) (copied from CONFIG/IPSLCM/IPSLCM5/branches/IPSLCM5_v2/EXP00/COMP/opa9.driver)
• PARAM/iodef.xml (added)
• PARAM/xmlio_server.def (added)
• POST (added)
• POST/monitoring01_lim2.cfg (added)
• README (added)
• config.card (modified) (3 diffs)

CONFIG/IPSLCM/IPSLCM5/branches/IPSLCM5_v2/EXP00/COMP/lim2.card

@@ -18 +18 @@
 
 [OutputText]
-List=   (ice_evolu, ice_mouchard)
+List=   (ice_evolu)
 
 [OutputFiles]
-List=   (${PREFIX_NWRITE}_${DATE_OPA}_icemod.nc, ${R_OUT_ICE_NWRITE}/${PREFIX}_${WF1}_icemod.nc, Post_1M_icemod)
+List=   (ORCA2_1m_icemod.nc, ${R_OUT_ICE_O_M}/${PREFIX}_1M_icemod.nc, Post_1M_icemod),\
+        (ORCA2_5d_icemod.nc, ${R_OUT_ICE_O_D}/${PREFIX}_5D_icemod.nc, Post_time),\
+        (ORCA2_1d_icemod.nc, ${R_OUT_ICE_O_D}/${PREFIX}_1D_icemod.nc, Post_time)
 
 [Post_1M_icemod]
-Patches = ()
-GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter)
-TimeSeriesVars = (iicethic, ileadfra, isnowthi, iicevelu, iicevelv)
+Patches = (Patch_20091030_histcom_time_axis)
+GatherWithInternal = (nav_lon, nav_lat, time_counter)
+TimeSeriesVars = (iicethic, isnowthi, iicevelu, iicevelv)
+
+[Post_time]
+Patches = (Patch_20091030_histcom_time_axis)
+GatherWithInternal =
+TimeSeriesVars =
+

CONFIG/IPSLCM/IPSLCM5/branches/IPSLCM5_v2/EXP00/COMP/opa9.card

@@ -5 +5 @@
 OPA_NPDT_JOURS=15
 ORCA_version=ORCA2.2
+io_xml=y
+io_server=n
 
 [InitialStateFiles]
@@ -27 +29 @@
 
 [ParametersFiles]
-List=   (${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE}, namelist)
+List=   (${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE}, namelist),       \
+        (${SUBMIT_DIR}/PARAM/iodef.xml,             iodef.xml),      \
+        (${SUBMIT_DIR}/PARAM/xmlio_server.def,      xmlio_server.def)
 
 [RestartFiles]
@@ -36 +40 @@
 
 [OutputFiles]
-List=   (${PREFIX_NWRITE}_${DATE_OPA}_grid_T.nc, ${R_OUT_OCE_NWRITE}/${PREFIX}_${WF1}_grid_T.nc, Post_1M_grid_T),\
-        (${PREFIX_NWRITE}_${DATE_OPA}_grid_U.nc, ${R_OUT_OCE_NWRITE}/${PREFIX}_${WF1}_grid_U.nc, Post_1M_grid_U) ,\
-        (${PREFIX_NWRITE}_${DATE_OPA}_grid_V.nc, ${R_OUT_OCE_NWRITE}/${PREFIX}_${WF1}_grid_V.nc, Post_1M_grid_V),\
-        (${PREFIX_NWRITE}_${DATE_OPA}_grid_W.nc, ${R_OUT_OCE_NWRITE}/${PREFIX}_${WF1}_grid_W.nc, Post_1M_grid_W),\
+List=   (ORCA2_1m_grid_T.nc, ${R_OUT_OCE_O_M}/${PREFIX}_1M_grid_T.nc, Post_1M_grid_T),\
+        (ORCA2_1m_grid_U.nc, ${R_OUT_OCE_O_M}/${PREFIX}_1M_grid_U.nc, Post_1M_grid_U),\
+        (ORCA2_1m_grid_V.nc, ${R_OUT_OCE_O_M}/${PREFIX}_1M_grid_V.nc, Post_1M_grid_V),\
+        (ORCA2_1m_grid_W.nc, ${R_OUT_OCE_O_M}/${PREFIX}_1M_grid_W.nc, Post_1M_grid_W),\
+        (ORCA2_5d_grid_T.nc, ${R_OUT_OCE_O_D}/${PREFIX}_5D_grid_T.nc, Post_time),\
+        (ORCA2_5d_grid_U.nc, ${R_OUT_OCE_O_D}/${PREFIX}_5D_grid_U.nc, Post_time),\
+        (ORCA2_5d_grid_V.nc, ${R_OUT_OCE_O_D}/${PREFIX}_5D_grid_V.nc, Post_time),\
+        (ORCA2_5d_grid_W.nc, ${R_OUT_OCE_O_D}/${PREFIX}_5D_grid_W.nc, Post_time),\
+        (ORCA2_1d_grid_T.nc, ${R_OUT_OCE_O_D}/${PREFIX}_1D_grid_T.nc, Post_time),\
+        (ORCA2_1d_grid_U.nc, ${R_OUT_OCE_O_D}/${PREFIX}_1D_grid_U.nc, Post_time),\
+        (ORCA2_1d_grid_V.nc, ${R_OUT_OCE_O_D}/${PREFIX}_1D_grid_V.nc, Post_time),\
+        (ORCA2_1d_grid_W.nc, ${R_OUT_OCE_O_D}/${PREFIX}_1D_grid_W.nc, Post_time),\
         (${PREFIX_NWRITE}_${DATE_OPA}_diaptr.nc, ${R_OUT_OCE_NWRITE}/${PREFIX}_${WF1}_diaptr.nc, Post_1M_diaptr),\
-        (${PREFIX_NWRITE}_${DATE_OPA}_S_tren.nc, ${R_OUT_OCE_NWRITE}/${PREFIX}_${WF1}_S_tren.nc, NONE),\
-        (${PREFIX_NWRITE}_${DATE_OPA}_T_tren.nc, ${R_OUT_OCE_NWRITE}/${PREFIX}_${WF1}_T_tren.nc, NONE),\
         (${PREFIX_NWRITE}_${DATE_OPA}_trends.nc, ${R_OUT_OCE_NWRITE}/${PREFIX}_${WF1}_trends.nc, NONE),\
-        (${PREFIX_NWRITE}_${DATE_OPA}_diagap.nc, ${R_OUT_OCE_NWRITE}/${PREFIX}_${WF1}_diagap.nc, NONE),\
-        (${PREFIX_NWRIHF}_${DATE_OPA}_grid_T.nc, ${R_OUT_OCE_NWRIHF}/${PREFIX}_${WF2}_grid_T.nc, NONE),\
-        (${PREFIX_NWRIHF}_${DATE_OPA}_grid_U.nc, ${R_OUT_OCE_NWRIHF}/${PREFIX}_${WF2}_grid_U.nc, NONE),\
-        (${PREFIX_NWRIHF}_${DATE_OPA}_grid_V.nc, ${R_OUT_OCE_NWRIHF}/${PREFIX}_${WF2}_grid_V.nc, NONE),\
-        (mesh_mask.nc                          , ${R_OUT_OCE_O}/${config_UserChoices_JobName}_mesh_mask.nc, NONE)
+        (damping.coeff.nc , ${R_OUT_OCE_O_D}/${PREFIX}_damping.coeff.nc, NONE),\
+        (mesh_mask.nc     , ${R_OUT_OCE_O}/${config_UserChoices_JobName}_mesh_mask.nc, NONE),\
+        (output.abort.nc  , ${R_OUT_OCE_D}/${PREFIX}_output.abort.nc, NONE),\
+        (output.init.nc   , ${R_OUT_OCE_O_I}/${config_UserChoices_JobName}_${PeriodDateBegin}_output.init.nc, NONE)
+
 
 [Post_1M_grid_T]
-Patches = ()
+Patches = (Patch_20091030_histcom_time_axis)
 GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter)
 TimeSeriesVars = (sohtc300, sohefldo, soicecov, somxl010, sosaline, sossheig, sosstsst, sowaflcd, sowaflup)
 
 [Post_1M_grid_U]
-Patches = ()
+Patches = (Patch_20091030_histcom_time_axis)
 GatherWithInternal = (nav_lon, nav_lat, depthu, time_counter)
 TimeSeriesVars = (sozotaux)
 
 [Post_1M_grid_V]
-Patches = ()
+Patches = (Patch_20091030_histcom_time_axis)
 GatherWithInternal = (nav_lon, nav_lat, depthv, time_counter)
 TimeSeriesVars = (sometauy)
 
 [Post_1M_grid_W]
-Patches = ()
+Patches = (Patch_20091030_histcom_time_axis)
 GatherWithInternal = (nav_lon, nav_lat, depthw, time_counter)
 TimeSeriesVars =
@@ -73 +83 @@
 Patches = ()
 GatherWithInternal = (lat, deptht, depthw, time_counter)
-TimeSeriesVars = (zotemglo, zosalglo, zomsfglo, zotematl, zosalatl, zomsfatl, zotempac, zosalpac, zomsfpac, zotemind, zosalind, zomsfind, zotemipc, zosalipc, zomsfipc, sohtatl, sostatl, sohtpac, sostpac, sohtind, sostind, sohtipc, sostipc, sophtadv, sophtldf, sophtove, sophtldf, sopstadv, sopstove, zomsfeiv, sophteiv, sopsteiv) 
+TimeSeriesVars = (zotemglo, zosalglo, zomsfglo, zotematl, zosalatl, zomsfatl, zotempac, zosalpac, zomsfpac, zotemind, zosalind, zomsfind, zotemipc, zosalipc, zomsfipc, sohtatl, sostatl, sohtpac, sostpac, sohtind, sostind, sohtipc, sostipc, sophtadv, sophtove, sophtldf, sopstadv, sopstove, zomsfeiv, sophteiv, sopsteiv)
+
+[Post_time]
+Patches = (Patch_20091030_histcom_time_axis)
+GatherWithInternal =
+TimeSeriesVars =

CONFIG/IPSLCM/IPSLCM5/branches/IPSLCM5_v2/EXP00/COMP/opa9.driver

@@ -43 +43 @@
     PAT_NRSTAR=$( supergrep nn_rstctl  ${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE} )
     PAT_NMSH=$(   supergrep nn_msh     ${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE} )
-    PAT_PRG=$(    supergrep nn_prg ${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE} )
+    PAT_PRG=$(    supergrep nn_prg     ${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE} )
     PAT_NF_PTR=$( supergrep nf_ptr_wri ${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE} )
 
-    ORCA_RDT=$( supergrep rn_rdt  ${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE} | sed 's/ *rn_rdt *=//' | sed 's/\. *//' )
+    ORCA_RDT=$(   supergrep rn_rdt     ${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE} | sed 's/ *rn_rdt *=//' | sed 's/\. *//' )
 
     # Period Length In Days between DateBegin and first day of calendar 0001 01 01
     # /!\ Needed by OPA namelist to compute file names /!\
     (( DaysSinceJC = $( IGCM_date_DaysSinceJC ${DateBegin} ) + 1 ))
+
+    ##--Variables used for XMLIO_SERVER configuration file
+    # using_server: .TRUE.(.FALSE.) to use(bypass) the io_server
+    PAT_SERVER=$( supergrep using_server ${SUBMIT_DIR}/PARAM/xmlio_server.def )
 
     IGCM_debug_PopStack "OCE_Initialize"
@@ -61 +65 @@
 
     NbFreq=$( echo ${config_OCE_WriteFrequency} | wc -w )
+
+    ## This informations are used for diaptr, trends and diagap files
+    ## only the first frequency is used for this files
 
     ##--Write Frequency Purpose ....
@@ -89 +96 @@
 
     ##--Write Frequency Purpose .... concerning the second opa file type.
-    if [ ${NbFreq} -eq 2 ] ; then
+    if [ ${NbFreq} -ge 2 ] ; then
         frequency=$( echo ${config_OCE_WriteFrequency} | awk "-F " '{print $2}' )
         factor=$( echo ${frequency} | sed -e "s/[yYmMdD]//" )
@@ -115 +122 @@
     fi
 
+
+    ##--Write Frequency for iomput
+    ## Differents frequencies are allowed for grid_[TUVW] and icemod files
+
+    V1D_ENABLE=".FALSE."
+    V5D_ENABLE=".FALSE."
+    V1M_ENABLE=".FALSE."
+    V1Y_ENABLE=".FALSE."
+
+    for frequency in ${config_OCE_WriteFrequency} ; do
+        case ${frequency} in
+            1D|1d) V1D_ENABLE=".TRUE." ;;
+        esac
+        case ${frequency} in
+            5D|5d) V5D_ENABLE=".TRUE." ;;
+        esac
+        case ${frequency} in
+            1M|1m) V1M_ENABLE=".TRUE." ;;
+        esac
+        case ${frequency} in
+            *[yY]) V1Y_ENABLE=".TRUE." ;;
+        esac
+    done
+
     # Period Length In Days between DateBegin and first day of calendar 0001 01 01
     # Needed by OPA namelist to compute correct file names 
@@ -190 +221 @@
     grep AUTO namelist
 
+    ##--Variables used for iodef xml configuration file
+    # output_1m_frequency_oce : output frequency of ocean output files in seconds
+    #     - length of 1 month (in seconds) 
+    #     - -1 for monthly mean with 31-28-31-30 .... calendar if
+    #          simulation are done per year. ie PeriodLength=1Y in config.card
+    #     - n days (in seconds) for other Period Length
+    #                           
+
+    output_1m_frequency_oce=-1
+
+    case ${config_UserChoices_PeriodLength} in
+        *Y|*y)
+              (( output_1m_frequency_oce = 86400 * $( IGCM_date_DaysInMonth ${year} ${month} ) )) 
+              if [ "${config_UserChoices_CalendarType}" != "360d" ] ; then
+                 output_1m_frequency_oce=-1
+              fi
+              ;;
+        *M|*m)
+              (( output_1m_frequency_oce = 86400 * $( IGCM_date_DaysInMonth ${year} ${month} ) ))
+              if [ "${config_UserChoices_CalendarType}" != "360d" ] ; then
+                 output_1m_frequency_oce=-1
+              fi
+              ;;
+        *)
+              (( output_1m_frequency_oce = PeriodLengthInDays * 86400 )) ;;
+    esac
+
+    echo 1M_Frequency in iodef : ${output_1m_frequency_oce}
+
+    # update iodef.xml
+
+    sed -e "s/<1D_ENABLE>/${V1D_ENABLE}/" \
+        -e "s/<5D_ENABLE>/${V5D_ENABLE}/" \
+        -e "s/<1M_ENABLE>/${V1M_ENABLE}/" \
+        -e "s/<1Y_ENABLE>/${V1Y_ENABLE}/" \
+        -e "s/<1M_FREQUENCY>/${output_1m_frequency_oce}/g" \
+        iodef.xml > iodef.xml.tmp
+
+    IGCM_sys_Mv iodef.xml.tmp iodef.xml
+
+    # update xmlio_server.def
+
+    if [ X${opa9_UserChoices_io_server} = Xy ] ; then
+        sed -e "s/${PAT_SERVER}/  using_server = .TRUE./" \
+        xmlio_server.def > xmlio_server.def.tmp
+        IGCM_sys_Mv xmlio_server.def.tmp xmlio_server.def
+    fi
+
     IGCM_debug_PopStack "OCE_Update"
 }

CONFIG/IPSLCM/IPSLCM5/branches/IPSLCM5_v2/EXP00/config.card

@@ -11 +11 @@
 #-- (<8 chars MAX for JobName)
 JobName=CM5
-LongName="IPSLCM5_v2 configuration"
+LongName="IPSLCM5_v2 configuration with iomput"
 TagName=IPSLCM5
 #============================
@@ -113 +113 @@
 #D-- OCE -
 [OCE]
-WriteFrequency="1M"
+WriteFrequency="1M 1D"
 # If config_Restarts_OverRule == 'n' all params are read
 Restart= n
@@ -127 +127 @@
 #D-- ICE -
 [ICE]
-WriteFrequency="1M"
+WriteFrequency="1M 1D"
 # If config_Restarts_OverRule == 'n' all params are read
 Restart= n