Index: CONFIG/UNIFORM/v6/NEMO_v6/GENERAL/PARAM/namelist_ref
===================================================================
--- CONFIG/UNIFORM/v6/NEMO_v6/GENERAL/PARAM/namelist_ref	(revision 2639)
+++ CONFIG/UNIFORM/v6/NEMO_v6/GENERAL/PARAM/namelist_ref	(revision 2737)
@@ -5,9 +5,9 @@
 !!                                    namsbc_cpl, namtra_qsr, namsbc_rnf,
 !!                                    namsbc_apr, namsbc_ssr, namsbc_alb)
-!!              4 - lateral boundary (namlbc, namcla, namobc, namagrif, nambdy, nambdy_tide)
+!!              4 - lateral boundary (namlbc, namcla, namagrif, nambdy, nambdy_tide)
 !!              5 - bottom  boundary (nambfr, nambbc, nambbl)
 !!              6 - Tracer           (nameos, namtra_adv, namtra_ldf, namtra_dmp)
 !!              7 - dynamics         (namdyn_adv, namdyn_vor, namdyn_hpg, namdyn_spg, namdyn_ldf)
-!!              8 - Verical physics  (namzdf, namzdf_ric, namzdf_tke, namzdf_kpp, namzdf_ddm, namzdf_tmx)
+!!              8 - Verical physics  (namzdf, namzdf_ric, namzdf_tke, namzdf_kpp, namzdf_ddm, namzdf_tmx, namzdf_tmx_new)
 !!              9 - diagnostics      (namnc4, namtrd, namspr, namflo, namhsb, namsto)
 !!             10 - miscellaneous    (namsol, nammpp, namctl)
@@ -408,5 +408,5 @@
    ln_qsr_2bd  = .false.   !  2 bands              light penetration
    ln_qsr_bio  = .false.   !  bio-model light penetration
-   nn_chldta   =      1    !  RGB : Chl data (=1) or cst value (=0)
+   nn_chldta   =      1    !  RGB : 2D Chl data (=1), 3D Chl data (=2) or cst value (=0)
    rn_abs      =   0.58    !  RGB & 2 bands: fraction of light (rn_si1)
    rn_si0      =   0.35    !  RGB & 2 bands: shortess depth of extinction
@@ -476,5 +476,5 @@
 
    cn_dir      = './'       !  root directory for the location of the bulk files
-   rn_pref     = 101000._wp !  reference atmospheric pressure   [N/m2]/
+   rn_pref     = 101000.    !  reference atmospheric pressure   [N/m2]/
    ln_ref_apr  = .false.    !  ref. pressure: global mean Patm (T) or a constant (F)
    ln_apr_obc  = .false.    !  inverse barometer added to OBC ssh data
@@ -500,9 +500,11 @@
 &namsbc_alb    !   albedo parameters
 !-----------------------------------------------------------------------
-   rn_cloud    =    0.06   !  cloud correction to snow and ice albedo
-   rn_albice   =    0.53   !  albedo of melting ice in the arctic and antarctic
-   rn_alphd    =    0.80   !  coefficients for linear interpolation used to
-   rn_alphc    =    0.65   !  compute albedo between two extremes values
-   rn_alphdi   =    0.72   !  (Pyane, 1972)
+   nn_ice_alb  =    0   !  parameterization of ice/snow albedo
+                        !     0: Shine & Henderson-Sellers (JGR 1985)
+                        !     1: "home made" based on Brandt et al. (J. Climate 2005)
+                        !                         and Grenfell & Perovich (JGR 2004)
+   rn_albice   =  0.53  !  albedo of bare puddled ice (values from 0.49 to 0.58)
+                        !     0.53 (default) => if nn_ice_alb=0
+                        !     0.50 (default) => if nn_ice_alb=1
 /
 !-----------------------------------------------------------------------
@@ -546,5 +548,4 @@
 !!   namlbc        lateral momentum boundary condition
 !!   namcla        cross land advection
-!!   namobc        open boundaries parameters                           ("key_obc")
 !!   namagrif      agrif nested grid ( read by child model only )       ("key_agrif")
 !!   nambdy        Unstructured open boundaries                         ("key_bdy")
@@ -563,25 +564,4 @@
 !-----------------------------------------------------------------------
    nn_cla      =    0      !  advection between 2 ocean pts separates by land
-/
-!-----------------------------------------------------------------------
-&namobc        !   open boundaries parameters                           ("key_obc")
-!-----------------------------------------------------------------------
-   ln_obc_clim = .false.   !  climatological obc data files (T) or not (F)
-   ln_vol_cst  = .true.    !  impose the total volume conservation (T) or not (F)
-   ln_obc_fla  = .false.   !  Flather open boundary condition
-   nn_obcdta   =    1      !  = 0 the obc data are equal to the initial state
-                           !  = 1 the obc data are read in 'obc.dta' files
-   cn_obcdta   = 'annual'  !  set to annual if obc datafile hold 1 year of data
-                           !  set to monthly if obc datafile hold 1 month of data
-   rn_dpein    =    1.     !  damping time scale for inflow at east  open boundary
-   rn_dpwin    =    1.     !     -           -         -       west    -      -
-   rn_dpnin    =    1.     !     -           -         -       north   -      -
-   rn_dpsin    =    1.     !     -           -         -       south   -      -
-   rn_dpeob    = 3000.     !  time relaxation (days) for the east  open boundary
-   rn_dpwob    =   15.     !     -           -         -     west    -      -
-   rn_dpnob    = 3000.     !     -           -         -     north   -      -
-   rn_dpsob    =   15.     !     -           -         -     south   -      -
-   rn_volemp   =    1.     !  = 0 the total volume change with the surface flux (E-P-R)
-                           !  = 1 the total volume remains constant
 /
 !-----------------------------------------------------------------------
@@ -898,10 +878,11 @@
 !!             Tracers & Dynamics vertical physics namelists
 !!======================================================================
-!!    namzdf        vertical physics
-!!    namzdf_ric    richardson number dependent vertical mixing         ("key_zdfric")
-!!    namzdf_tke    TKE dependent vertical mixing                       ("key_zdftke")
-!!    namzdf_kpp    KPP dependent vertical mixing                       ("key_zdfkpp")
-!!    namzdf_ddm    double diffusive mixing parameterization            ("key_zdfddm")
-!!    namzdf_tmx    tidal mixing parameterization                       ("key_zdftmx")
+!!    namzdf            vertical physics
+!!    namzdf_ric        richardson number dependent vertical mixing     ("key_zdfric")
+!!    namzdf_tke        TKE dependent vertical mixing                   ("key_zdftke")
+!!    namzdf_kpp        KPP dependent vertical mixing                   ("key_zdfkpp")
+!!    namzdf_ddm        double diffusive mixing parameterization        ("key_zdfddm")
+!!    namzdf_tmx        tidal mixing parameterization                   ("key_zdftmx")
+!!    namzdf_tmx_new    new tidal mixing parameterization               ("key_zdftmx_new")
 !!======================================================================
 !
@@ -1010,5 +991,11 @@
    rn_tfe_itf  = 1.        !  ITF tidal dissipation efficiency
 /
-
+!-----------------------------------------------------------------------
+&namzdf_tmx_new    !   new tidal mixing parameterization                ("key_zdftmx_new")
+!-----------------------------------------------------------------------
+   nn_zpyc     = 1         !  pycnocline-intensified dissipation scales as N (=1) or N^2 (=2)
+   ln_mevar    = .true.    !  variable (T) or constant (F) mixing efficiency
+   ln_tsdiff   = .true.    !  account for differential T/S mixing (T) or not (F)
+/
 !!======================================================================
 !!                  ***  Miscellaneous namelists  ***
@@ -1196,59 +1183,52 @@
    ln_s3d     = .false.    ! Logical switch for S profile observations
    ln_ena     = .false.    ! Logical switch for ENACT insitu data set
-   !                       !     ln_cor                  Logical switch for Coriolis insitu data set
+   ln_cor     = .false.    ! Logical switch for Coriolis insitu data set
    ln_profb   = .false.    ! Logical switch for feedback insitu data set
    ln_sla     = .false.    ! Logical switch for SLA observations
-
    ln_sladt   = .false.    ! Logical switch for AVISO SLA data
-
    ln_slafb   = .false.    ! Logical switch for feedback SLA data
-                           !     ln_ssh                  Logical switch for SSH observations
-
-   ln_sst     = .false.     ! Logical switch for SST observations
-   ln_reysst  = .false.     !     ln_reysst               Logical switch for Reynolds observations
-   ln_ghrsst  = .false.    !     ln_ghrsst               Logical switch for GHRSST observations
-
+   ln_ssh     = .false.    ! Logical switch for SSH observations
+   ln_sst     = .false.    ! Logical switch for SST observations
+   ln_reysst  = .false.    ! Logical switch for Reynolds observations
+   ln_ghrsst  = .false.    ! Logical switch for GHRSST observations
    ln_sstfb   = .false.    ! Logical switch for feedback SST data
-                           !     ln_sss                  Logical switch for SSS observations
+   ln_sss     = .false.    ! Logical switch for SSS observations
    ln_seaice  = .false.    ! Logical switch for Sea Ice observations
-                           !     ln_vel3d                Logical switch for velocity observations
-                           !     ln_velavcur             Logical switch for velocity daily av. cur.
-                           !     ln_velhrcur             Logical switch for velocity high freq. cur.
-                           !     ln_velavadcp            Logical switch for velocity daily av. ADCP
-                           !     ln_velhradcp            Logical switch for velocity high freq. ADCP
-                           !     ln_velfb                Logical switch for feedback velocity data
-                           !     ln_grid_global          Global distribtion of observations
-                           !     ln_grid_search_lookup   Logical switch for obs grid search w/lookup table
-                           !     grid_search_file        Grid search lookup file header
-                           !     enactfiles              ENACT input observation file names
-                           !     coriofiles              Coriolis input observation file name
-   !                       ! profbfiles: Profile feedback input observation file name
-   profbfiles = 'profiles_01.nc'
-                           !     ln_profb_enatim         Enact feedback input time setting switch
-                           !     slafilesact             Active SLA input observation file name
-                           !     slafilespas             Passive SLA input observation file name
-   !                       ! slafbfiles: Feedback SLA input observation file name
-   slafbfiles = 'sla_01.nc'
-                           !     sstfiles                GHRSST input observation file name
-   !                       ! sstfbfiles: Feedback SST input observation file name
-   sstfbfiles = 'sst_01.nc'
-                           !     seaicefiles             Sea Ice input observation file names
-   seaicefiles = 'seaice_01.nc'
-                           !     velavcurfiles           Vel. cur. daily av. input file name
-                           !     velhvcurfiles           Vel. cur. high freq. input file name
-                           !     velavadcpfiles          Vel. ADCP daily av. input file name
-                           !     velhvadcpfiles          Vel. ADCP high freq. input file name
-                           !     velfbfiles              Vel. feedback input observation file name
-                           !     dobsini                 Initial date in window YYYYMMDD.HHMMSS
-                           !     dobsend                 Final date in window YYYYMMDD.HHMMSS
-                           !     n1dint                  Type of vertical interpolation method
-                           !     n2dint                  Type of horizontal interpolation method
-                           !     ln_nea                  Rejection of observations near land switch
-   nmsshc     = 0          ! MSSH correction scheme
-                           !     mdtcorr                 MDT  correction
-                           !     mdtcutoff               MDT cutoff for computed correction
+   ln_vel3d   = .false.    ! Logical switch for velocity observations
+   ln_velavcur= .false     ! Logical switch for velocity daily av. cur.
+   ln_velhrcur= .false     ! Logical switch for velocity high freq. cur.
+   ln_velavadcp = .false.  ! Logical switch for velocity daily av. ADCP
+   ln_velhradcp = .false.  ! Logical switch for velocity high freq. ADCP
+   ln_velfb   = .false.    ! Logical switch for feedback velocity data
+   ln_grid_global = .false. ! Global distribtion of observations
+   ln_grid_search_lookup = .false. !  Logical switch for obs grid search w/lookup table
+   grid_search_file = 'grid_search'  !  Grid search lookup file header
+! All of the *files* variables below are arrays. Use namelist_cfg to add more files
+   enactfiles = 'enact.nc' !  ENACT input observation file names (specify full array in namelist_cfg)
+   coriofiles = 'corio.nc' !  Coriolis input observation file name
+   profbfiles = 'profiles_01.nc' ! Profile feedback input observation file name
+   ln_profb_enatim = .false !        Enact feedback input time setting switch
+   slafilesact = 'sla_act.nc' !  Active SLA input observation file names
+   slafilespas = 'sla_pass.nc' ! Passive SLA input observation file names
+   slafbfiles = 'sla_01.nc' ! slafbfiles: Feedback SLA input observation file names
+   sstfiles = 'ghrsst.nc'   ! GHRSST input observation file names
+   sstfbfiles = 'sst_01.nc' ! Feedback SST input observation file names
+   seaicefiles = 'seaice_01.nc' ! Sea Ice input observation file names
+   velavcurfiles = 'velavcurfile.nc'  ! Vel. cur. daily av. input file name
+   velhrcurfiles = 'velhrcurfile.nc'  ! Vel. cur. high freq. input file name
+   velavadcpfiles = 'velavadcpfile.nc' ! Vel. ADCP daily av. input file name
+   velhradcpfiles = 'velhradcpfile.nc' ! Vel. ADCP high freq. input file name
+   velfbfiles = 'velfbfile.nc' ! Vel. feedback input observation file name
+   dobsini = 20000101.000000  !  Initial date in window YYYYMMDD.HHMMSS
+   dobsend = 20010101.000000  !  Final date in window YYYYMMDD.HHMMSS
+   n1dint = 0  !               Type of vertical interpolation method
+   n2dint = 0  !               Type of horizontal interpolation method
+   ln_nea = .false.   !        Rejection of observations near land switch
+   nmsshc     = 0     !        MSSH correction scheme
+   mdtcorr = 1.61     !        MDT  correction
+   mdtcutoff = 65.0   !        MDT cutoff for computed correction
    ln_altbias = .false.    ! Logical switch for alt bias
    ln_ignmis  = .true.     ! Logical switch for ignoring missing files
-                           !     endailyavtypes   ENACT daily average types
+   endailyavtypes = 820    ! ENACT daily average types - array (use namelist_cfg to set more values)
    ln_grid_global = .true.
    ln_grid_search_lookup = .false.
