Index: CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/inca.card
===================================================================
--- CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/inca.card	(revision 2391)
+++ CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/inca.card	(revision 2391)
@@ -0,0 +1,71 @@
+#- $Id: inca.card 70 2007-06-21 14:20:42Z acosce $
+[Compatibility]
+libIGCM=1.0
+
+[UserChoices]
+# Set climatological to choose if the simulation will use online 10m wind (=y) or offline (=n)
+climatological=n
+# Set climatological to choose the write_frequency for inca output (inca_avgr, forcage, inca_inst)
+# 86400 = daily output
+freq_write_chem=86400
+# heat fluxes computed with feedback corresponding to 0 --> no aerosol effects, 1--> aerosol effects selected by ok_ade, ok_aie
+feedb=0
+
+# Use XIOS as output library
+XIOS=y
+
+[InitialStateFiles]
+List= ()
+	
+[BoundaryFiles]
+List=	    (/ccc/work/cont003/subipsl/subipsl/ECMWF320x160/AN${year}/165_${year}${month}.nc      , u10mec.nc)\
+	    (/ccc/work/cont003/subipsl/subipsl/ECMWF320x160/AN${year}/166_${year}${month}.nc      , v10mec.nc)\
+	    (/ccc/work/cont003/subipsl/subipsl/ECMWF${RESOL_ATM_XY}/AN${year}/u10m_ecmwf_${year}${month}.nc , u10m.nc  )\
+	    (/ccc/work/cont003/subipsl/subipsl/ECMWF${RESOL_ATM_XY}/AN${year}/v10m_ecmwf_${year}${month}.nc , v10m.nc  )
+
+ListNonDel= (${R_INIT}/CHM/LMDZORINCA/INCA${RESOL_CHM}/npp.nc		,   npp.nc		)\
+            (${R_INIT}/CHM/LMDZORINCA/INCA${RESOL_CHM}/oxydants.nc	,   oxydants.nc		)\
+            (/ccc/work/cont003/dsm/p86cozic/INPUT_NITRATE/aircraft_ar5_2000.nc		,   aircraft.nc    )\
+            (/ccc/work/cont003/dsm/p86cozic/INPUT_NITRATE/sflx_ar5_2000.nc		,   sflx.nc        )\
+	    (${R_INIT}/CHM/LMDZORINCA/INCA${RESOL_CHM}/landuse.nc	,   landuse.nc		)\
+            (${R_INIT}/CHM/LMDZORINCA/INCA${RESOL_CHM}/rhvEC.txt	,   rhvEC.txt		)\
+            (${R_INIT}/CHM/LMDZORINCA/INCA${RESOL_CHM}/wthEC.txt	,   wthEC.txt		)\
+            (${R_INIT}/CHM/LMDZORINCA/INCA${RESOL_CHM}/clyEC.txt	,   clyEC.txt		)\
+            (${R_INIT}/CHM/LMDZORINCA/INCA${RESOL_CHM}/wth.dat		,   wth.dat		)\
+            (${R_INIT}/CHM/LMDZORINCA/INCA${RESOL_CHM}/cly.dat		,   cly.dat		)\
+ 	    (${R_INIT}/CHM/LMDZORINCA/INCA${RESOL_CHM}/rhv.dat		,   rhv.dat		)\
+	    (${R_INIT}/CHM/LMDZORINCA/INCA${RESOL_CHM}/phototable_glo.dat   ,   phototable.dat	)
+
+
+[ParametersFiles]
+List= (${SUBMIT_DIR}/PARAM/inca.def, .),\
+	(${MODIPSL}/modeles/INCA/src/INCA_XML/context_inca.xml, .)   ,\
+	(${MODIPSL}/modeles/INCA/src/INCA_XML/field_def_inca.xml, .) ,\
+	(${MODIPSL}/modeles/INCA/src/INCA_XML/file_def_inca.xml, .)
+
+[RestartFiles]
+# List restart that have to be saved/restored each loop (file out, saved, and in) :
+List= (precipinsoil.dat, precipinsoil.dat, precipinsoil.dat) 
+
+
+[OutputText]
+List=(inca.out, inca.def,iodef.xml,context_inca.xml,field_def_inca.xml,file_def_inca.xml)
+
+[OutputFiles]
+List=	(inca_avgr.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_inca_avgr.nc,    Post_1M_inca_avgr  ),\
+	(inca_emi_xios.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_inca_emi_xios.nc,    NONE  ),\
+	(inca_species_xios.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_inca_species_xios.nc,    NONE  ),\
+	(inca_dvel_xios.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_inca_dvel_xios.nc,    NONE  ),\
+	(inca_aero_xios.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_inca_aero_xios.nc,    NONE  ),\
+	(inca_common_xios.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_inca_common_xios.nc,    NONE  ),\
+	(inca_washrate_xios.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_inca_washrate_xios.nc,    NONE  ),\
+	(forcage.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_forcage.nc,      NONE)
+
+
+[Post_1M_inca_avgr]
+Patches= ()
+GatherWithInternal = (lon, lat, presnivs, time_counter)
+TimeSeriesVars2D = (OD550_ASBCM, OD550_ASPOMM, OD550_ASSO4M, OD550_CSSO4M, OD550_SSSSM, OD550_ASSSM, OD550_CSSSM, OD550_CIDUSTM, OD550_AIBCM, OD550_AIPOMM)
+ChunckJob2D = NONE
+TimeSeriesVars3D = (CH4,NO,NO2,CO,O3,HNO3)
+ChunckJob3D = NONE
Index: CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/lmdz.card
===================================================================
--- CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/lmdz.card	(revision 2391)
+++ CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/lmdz.card	(revision 2391)
@@ -0,0 +1,122 @@
+#- $Id: lmdz.card 70 2007-06-21 14:20:42Z acosce $
+[Compatibility]
+libIGCM=1.0
+
+[UserChoices]
+# Physics package to use : 
+# AP for standard/old physics(defalut), can be used with LMDZ4_AR5 or LMDZ5/trunk sources 
+# NPv3.1 for new physics, to be used with LMDZ5/trunk revision 1554 or later
+LMDZ_Physics=AP
+#LMDZ_Physics=NPv3.1
+#LMDZ_Physics=NPv3.2
+
+# Use XIOS as output library
+XIOS=y
+
+# Set the variable CREATE needed further below to find the initial and boundary condition files.
+CREATE=ELC-${RESOL_ATM_3D}
+
+# ByPass_hgardfou_teta=y : modify teta_ parameters for following CumulPeriod only
+ByPass_hgardfou_teta=n
+
+# ByPass_hgardfou_mats=y : set parameter purmats=y for following CumulPeriod only
+ByPass_hgardfou_mats=n
+
+# Number of periods where to set parameter adjust=y before switching to adjust=n
+# For adjust=n, set LMDZ_NbPeriod_ajust=0. 
+LMDZ_NbPeriod_adjust=0
+# LMDZ_NbPeriod_adjust=0
+# To force usage of this Bands file, put LMDZ_NbPeriod_adjust=0 and replace XXXXXXX by Restart Job Name
+#LMDZ_Bands_file_name=/ccc/store/cont003/dsm/p86cozic/IGCM_OUT/LMDZORINCA/NMHC_AER/L4OI3NA_39_Bands/ATM/Debug/L4OI3NA_39_Bands_Bands_96x95x39_32prc.dat_1
+
+# Set ConfType to choose parameters for aerosols, solar and green house gazes. 
+# The parameter file PARAM/config.def_$ConfType will be used.
+# ConfType=preind/actuel/annuel
+ConfType=actuel
+
+# manage radiative aerosol effect and ozone 
+flag_aerosol=6
+ok_ade=y
+ok_aie=n
+aerosol_couple=y
+read_climoz=0
+ok_cdnc=y
+
+# Set OutLevel to choose the level of output files from LMDZ. The file PARAM/output.def_$OutLevel will be used.
+# OutLevel=low/medium/high
+OutLevel=low
+
+# Set COSP activation and Outputs frequency (monthly, daily, HF) = y/n
+LMDZ_COSP_OK=n
+LMDZ_COSP_monthly=n
+LMDZ_COSP_daily=n
+LMDZ_COSP_hf=n
+
+# Set NMC Outputs frequency (monthly, daily, HF) = y/n
+LMDZ_NMC_monthly=n
+LMDZ_NMC_daily=n
+LMDZ_NMC_hf=n
+
+
+# Nugding : ok_guide=y/n
+# If ok_guide=y, add nudging files(u.nc, v.nc, hur.nc,...) in BoundaryFiles section below.
+ok_guide=n
+
+
+[InitialStateFiles]
+# start and startphy are the clim files computed with CLIM_CREATE (create_etat0_limit) job
+List= 	(${R_INIT}/CHM/LMDZORINCA/INCA${RESOL_CHM}/start.nc	, start.nc	) \
+	(${R_INIT}/CHM/LMDZORINCA/INCA${RESOL_CHM}/startphy.nc	, startphy.nc	)
+
+
+[BoundaryFiles]
+List=   (${R_BC}/CHM/LMDZORINCA/${RESOL_ATM}_leap/EL-${RESOL_ATM}_${year}1231_limit.nc , limit.nc)
+
+#	(/ccc/work/cont003/subipsl/subipsl/ECMWF${RESOL_ATM_XY}/AN${year}/u_ecmwf_${year}${month}.nc 	, u.nc		),\
+#	(/ccc/work/cont003/subipsl/subipsl/ECMWF${RESOL_ATM_XY}/AN${year}/v_ecmwf_${year}${month}.nc 	, v.nc		)
+ 
+ListNonDel= ()
+
+[ParametersFiles]
+List=	(${SUBMIT_DIR}/PARAM/physiq.def_L${RESOL_ATM_Z}_${LMDZ_Physics}, physiq.def), \
+	(${SUBMIT_DIR}/PARAM/gcm.def_${RESOL_ATM_3D},    gcm.def),    \
+	(${SUBMIT_DIR}/PARAM/cosp_input_nl.txt,                .),    \
+	(${SUBMIT_DIR}/PARAM/cosp_output_nl.txt,               .),    \
+	(${SUBMIT_DIR}/PARAM/output.def_${OutLevel},  output.def),    \
+	(${SUBMIT_DIR}/PARAM/config.def_${ConfType},  config.def),    \
+	(${SUBMIT_DIR}/PARAM/guide.def, .), \
+	(${SUBMIT_DIR}/PARAM/run.def, .), \
+	(${SUBMIT_DIR}/PARAM/traceur.def, .), \
+	(${SUBMIT_DIR}/PARAM/iodef.xml, . ),\
+	(${MODIPSL}/modeles/LMDZ/DefLists/context_lmdz.xml, . )            ,\
+	(${MODIPSL}/modeles/LMDZ/DefLists/field_def_lmdz.xml, . )          ,\
+	(${MODIPSL}/modeles/LMDZ/DefLists/file_def_histday_lmdz.xml, . )   ,\
+	(${MODIPSL}/modeles/LMDZ/DefLists/file_def_histhf_lmdz.xml, . )    ,\
+	(${MODIPSL}/modeles/LMDZ/DefLists/file_def_histins_lmdz.xml, . )   ,\
+	(${MODIPSL}/modeles/LMDZ/DefLists/file_def_histLES_lmdz.xml, . )   ,\
+	(${MODIPSL}/modeles/LMDZ/DefLists/file_def_histmth_lmdz.xml, . )   ,\
+	(${MODIPSL}/modeles/LMDZ/DefLists/file_def_histstn_lmdz.xml, . )   ,\
+	(${MODIPSL}/modeles/LMDZ/DefLists/file_def_histmthNMC_lmdz.xml, . ),\
+	(${MODIPSL}/modeles/LMDZ/DefLists/file_def_histdayNMC_lmdz.xml, . ),\
+ 	(${MODIPSL}/modeles/LMDZ/DefLists/file_def_histhfNMC_lmdz.xml, . ),\
+ 	(${MODIPSL}/modeles/LMDZ/DefLists/file_def_histmthCOSP_lmdz.xml, . ),\
+ 	(${MODIPSL}/modeles/LMDZ/DefLists/file_def_histdayCOSP_lmdz.xml, . ),\
+ 	(${MODIPSL}/modeles/LMDZ/DefLists/file_def_histhfCOSP_lmdz.xml, . )
+
+[RestartFiles]
+List=	(restart.nc, restart.nc, start.nc), \
+	(restartphy.nc, restartphy.nc,  startphy.nc) 
+
+[OutputText]
+List=   (physiq.def, gcm.def, run.def, traceur.def, guide.def, config.def, used_run.def, iodef.xml, context_lmdz.xml,field_def_lmdz.xml)
+
+[OutputFiles]
+List=	(histmth.nc,      ${R_OUT_ATM_O_M}/${PREFIX}_1M_histmth.nc,   Post_1M_histmth   )	
+
+[Post_1M_histmth]
+Patches= ()
+GatherWithInternal = (lon, lat, presnivs, time_counter, time_counter_bnds, aire)
+TimeSeriesVars2D = (bils, cldh, cldl, cldm, cldq, cldt, evap, iwp, lwp, LWdnSFC, LWdnSFCclr, LWupSFCclr, LWdn200, LWdn200clr, LWup200, LWup200clr, precip, prw, pluc, psol, q2m, sens, sicf, slp, snow, soll0, soll, sols0, sols, SWdnSFC, SWupSFC, SWup200, SWdnTOA, SWupTOA, SWdn200, SWdnSFCclr, SWupSFCclr, SWupTOAclr, t2m, t2m_max, t2m_min, taux_ter, taux_sic, taux_lic, taux_oce, tauy_ter, tauy_sic, tauy_lic, tauy_oce, lat_ter, lat_sic, lat_lic, lat_oce, topl0, topl, tops0, tops, topswad, topswai, tsol, tsol_ter, tsol_lic, tsol_oce, tsol_sic , u10m, u500, v10m, v500, w500, pourc_ter, pourc_oce, pourc_sic, pourc_lic)
+ChunckJob2D = NONE
+TimeSeriesVars3D = ()
+ChunckJob3D = NONE
Index: CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/orchidee.card
===================================================================
--- CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/orchidee.card	(revision 2391)
+++ CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/orchidee.card	(revision 2391)
@@ -0,0 +1,74 @@
+[Compatibility]
+libIGCM=1.0
+
+[UserChoices]
+# The variable DefSuffix gives the suffix of the orchidee.def file to be used.
+# By default the file orchidee.def_Choi will be selected.
+# Sef DefSuffix=Choi (default) to activate default 2-layer Choisnel hydrology
+# Set DefSuffix=CWRR to activate 11-layer CWRR hydrology
+DefSuffix=Choi
+
+sechiba_LEVEL=11
+VEGET_UPDATE=0Y
+LAND_COVER_CHANGE=n
+
+# Use XIOS as output library
+XIOS=y
+
+[InitialStateFiles]
+List=	(${R_INIT}/SRF/LMDZORINCA/soils_param.nc,      . ), \
+	(${R_INIT}/SRF/LMDZORINCA/routing.nc,          . ), \
+	(${R_BC}/SRF/LMDZORINCA/PFTmap_1850to2005_AR5_LUHa.rc2/PFTmap_IPCC_${year}.nc, PFTmap.nc)
+## Pour les annees 2006-2100 suivant le RCP 
+#(${R_BC}/SRF/LMDZORINCA/PFTmap_2006to2100_AR5_RCP8.5_MESSAGE/PFTmap_IPCC_${year}.nc, PFTmap.nc)
+#(${R_BC}/SRF/LMDZORINCA/PFTmap_2006to2100_AR5_RCP4.5_MiniCAM//PFTmap_IPCC_${year}.nc, PFTmap.nc)
+#(${R_BC}/SRF/LMDZORINCA/PFTmap_2006to2100_AR5_RCP6.0_AIM//PFTmap_IPCC_${year}.nc, PFTmap.nc)
+#(${R_BC}/SRF/LMDZORINCA/PFTmap_2006to2100_AR5_RCP3-PD_IMAGE//PFTmap_IPCC_${year}.nc, PFTmap.nc)
+
+[BoundaryFiles]
+List= ()
+ListNonDel= ()
+
+[SmoothFiles]
+List=(${R_BC}/SRF/LMDZORINCA/PFTmap_1850to2005_AR5_LUHa.rc2/PFTmap_IPCC_${year_p1}.nc, PFTmap.nc, 12:12:)
+## Pour les annees 2006-2100 suivant le RCP 
+#(${R_BC}/SRF/LMDZORINCA/PFTmap_2006to2100_AR5_RCP8.5_MESSAGE/PFTmap_IPCC_${year_p1}.nc, PFTmap.nc, 12:12:)
+#(${R_BC}/SRF/LMDZORINCA/PFTmap_2006to2100_AR5_RCP4.5_MiniCAM//PFTmap_IPCC_${year_p1}.nc, PFTmap.nc, 12:12:)
+#(${R_BC}/SRF/LMDZORINCA/PFTmap_2006to2100_AR5_RCP6.0_AIM//PFTmap_IPCC_${year_p1}.nc, PFTmap.nc, 12:12:)
+#(${R_BC}/SRF/LMDZORINCA/PFTmap_2006to2100_AR5_RCP3-PD_IMAGE//PFTmap_IPCC_${year_p1}.nc, PFTmap.nc, 12:12:)
+
+[ParametersFiles]
+List=	(${SUBMIT_DIR}/PARAM/orchidee.def_${DefSuffix}, orchidee.def)   ,\
+	(${MODIPSL}/modeles/ORCHIDEE/src_xml/context_orchidee.xml, .)   ,\
+	(${MODIPSL}/modeles/ORCHIDEE/src_xml/field_def_orchidee.xml, .) ,\
+	(${MODIPSL}/modeles/ORCHIDEE/src_xml/file_def_orchidee.xml, .)
+
+[RestartFiles]
+# List restart that have to be saved/restored each loop (file out, saved, and in) :
+List=	(sechiba_rest_out.nc, sechiba_rest.nc, sechiba_rest_in.nc)
+
+[OutputText]
+List=   (out_orchidee, orchidee.def, iodef.xml, context_orchidee.xml, field_def_orchidee.xml, file_def_orchidee.xml)
+
+[OutputFiles]
+List=	(sechiba_history.nc, ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history.nc, Post_1M_sechiba_history), \
+        (sechiba_out_2.nc, ${R_OUT_SRF_O_H}/${PREFIX}_HF_sechiba_out_2.nc, Post_HF_sechiba_out_2), \
+        (orchidee_watchout.nc, ${R_OUT_SRF_O_M}/${PREFIX}_1M_watchout.nc, NONE)
+
+[Post_1M_sechiba_history]
+Patches= ()
+GatherWithInternal= (lon, lat, veget, time_counter, time_counter_bnds, Areas, Contfrac)
+TimeSeriesVars2D= (nobiofrac, alb_nir, alb_vis, bqsb, evap, fluxlat, fluxsens, gqsb, netrad, qair, rain, runoff, snow, snownobio, snowf, subli, tair, temp_sol, tsol_max, tsol_min, drainage,mrsos, mrso, mrros, mrro, prveg, evspsblveg, evspsblsoi, tran, treeFrac, grassFrac, cropFrac, baresoilFrac, residualFrac)
+ChunckJob2D= NONE
+TimeSeriesVars3D= (lai, maxvegetfrac, vegetfrac, CO2FLUX, ptn, nee)
+ChunckJob3D= NONE
+Seasonal= ON
+
+[Post_HF_sechiba_out_2]
+Patches= ()
+GatherWithInternal= (lon, lat, veget, time_counter, time_counter_bnds, Areas, Contfrac)
+TimeSeriesVars2D= (mrsos, mrro)
+ChunckJob2D= 50Y
+TimeSeriesVars3D= (ptn)
+ChunckJob3D= 10Y
+Seasonal= OFF
Index: CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/stomate.card
===================================================================
--- CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/stomate.card	(revision 2391)
+++ CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/stomate.card	(revision 2391)
@@ -0,0 +1,47 @@
+[Compatibility]
+libIGCM=1.0
+
+[UserChoices]
+stomate_LEVEL=10
+
+[InitialStateFiles]
+List=   ()
+
+[BoundaryFiles]
+List=	()
+ListNonDel= (${R_BC}/SRF/LMDZORINCA/reftemp.nc, .)
+
+[SmoothFiles]
+List=	()
+
+[ParametersFiles]
+List=   ()
+
+[RestartFiles]
+# List restart that have to be saved/restored each loop (file out, saved, and in) :
+List=	(stomate_rest_out.nc, stomate_rest.nc, stomate_rest_in.nc)
+
+[OutputText]
+List=   ()
+
+[OutputFiles]
+List=	(stomate_history.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_history.nc, Post_1M_stomate_history) \
+    (stomate_ipcc_history.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_ipcc_history.nc, Post_1M_stomate_ipcc_history)
+
+[Post_1M_stomate_history]
+Patches= ()
+GatherWithInternal= (lon, lat, PFT, time_counter, time_counter_bnds, Areas)
+TimeSeriesVars2D= (T2M_MONTH,CONTFRAC,RESOLUTION_X,RESOLUTION_Y,CONVFLUX,CFLUX_PROD10,CFLUX_PROD100,HARVEST_ABOVE)
+ChunckJob2D = NONE
+TimeSeriesVars3D = (CO2FLUX_MONTHLY,LAI,VEGET,VEGET_MAX,NPP,GPP,HET_RESP,MAINT_RESP,GROWTH_RESP,AGE,HEIGHT,TOTAL_M,TOTAL_BM_LITTER,TOTAL_SOIL_CARB,CO2_FIRE)
+ChunckJob3D = NONE
+Seasonal=ON
+
+[Post_1M_stomate_ipcc_history]
+Patches= ()
+GatherWithInternal= (lon, lat, PFT, time_counter, time_counter_bnds, Areas, CONTFRAC)
+TimeSeriesVars2D=(cVeg, cLitter, cSoil, cProduct, lai, gpp, ra, npp, rh, fFire, fHarvest, fLuc, nbp, fVegLitter, fLitterSoil, cLeaf, cWood, cRoot, cMisc, cLitterAbove, cLitterBelow, cSoilFast, cSoilMedium, cSoilSlow, landCoverFrac, treeFracPrimDec, treeFracPrimEver, c3PftFrac, c4PftFrac, rGrowth, rMaint, nppLeaf, nppWood, nppRoot, nep)
+ChunckJob2D = NONE
+TimeSeriesVars3D=()
+ChunckJob3D = NONE
+Seasonal=ON
Index: CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/xios.card
===================================================================
--- CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/xios.card	(revision 2391)
+++ CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/COMP/xios.card	(revision 2391)
@@ -0,0 +1,29 @@
+[Compatibility]
+libIGCM=1.0
+
+[UserChoices]
+
+[InitialStateFiles]
+List=	()
+
+[BoundaryFiles]
+List=	()
+ListNonDel= ()
+
+[SmoothFiles]
+List=	()
+
+[ParametersFiles]
+List=	()
+
+[RestartFiles]
+List=	(NONE)
+
+[OutputText]
+List=   ()
+
+[OutputFiles]
+List=   ()
+
+
+
Index: CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/config.card
===================================================================
--- CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/config.card	(revision 2391)
+++ CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/AER/config.card	(revision 2391)
@@ -0,0 +1,166 @@
+#- $Id: config.card 69 2007-06-21 14:08:22Z acosce $
+#========================================================================
+#D-- Carte pour run AR5WERF -- 
+#D-- Les fichiers sflx - aircraft - start - startphy créés par S. Szopa
+#D--
+#========================================================================
+#D-- Compatibility -
+[Compatibility]
+libIGCM=1.0
+#========================================================================
+#D-- UserChoices -
+[UserChoices]
+#============================
+#D-- (<8 chars MAX for JobName)
+JobName=L5OI5run
+SpaceName=PROD
+ExperimentName=NP
+LongName='nouvelles configs + LMDZ5 INCA5 39 + Xios + possibilite nouvelle physique '
+TagName=LMDZORINCA/${CHEM}
+#D- Choice of experiment in EXPERIEMENTS directory
+ExpType=LMDZORINCA/NMHC_AER
+#============================
+#D-- leap, noleap, 360d
+CalendarType=leap
+#D-- Début et fin de Job
+#D-- "YYYY-MM-DD"
+DateBegin=2006-01-01
+DateEnd=2006-12-31
+#============================
+#D-- 1Y, 1M, 5D, 1D
+PeriodLength=1M
+#============================
+#-- PBS Class (required on brodie mono/multi)
+#JobClass=mono
+JobClass=multi
+#============================
+#-- Total Number of Processors (minimum is 2 for a coupled configuration)
+JobNumProcTot=32
+#============================
+#-- Run Options : here for oasis coupling
+#-- For Vargas
+#JobRunOptions=JobRunOptions=''
+#-- For Titane 
+JobRunOptions='"-np "${config_UserChoices_JobNumProcTot}'
+#========================================================================
+#D-- ListOfComponents -
+[ListOfComponents]
+#D- For each component, Name of component, Tag of component
+ATM= (lmdz, LMDZ5)
+SRF= (orchidee, orchidee_1_9_5)
+SBG= (stomate, ORCHIDEE_1_9_5)
+CHM= (inca, INCA5) 
+IOS= (xios, XIOS)
+
+#========================================================================
+#D-- Executable -
+[Executable]
+Name=gcm.e
+#D- For each component, Real name of executable, Name of executable for oasis
+ATM= (gcm.e, gcm.e, 32MPI, 1OMP)
+SRF= ("", "")
+SBG= ("", "")
+CHM= (inca.dat, inca.dat)
+IOS= (xios_server.exe, xios.x, 1MPI)
+
+#========================================================================
+#D-- Restarts -
+[Restarts]
+#D- If you want a GENERAL RULE FOR RESTARTS, put this flag to 'y'
+OverRule=n
+#D- Last day of the experience used as restart
+RestartDate=2005-12-31
+#D- Define restart simulation name (=> JOB_OS)
+RestartJobName=LOI_AR5WERF_E0_2006
+#D- Path Server Group Login (=> PSGL)
+RestartPath=/ccc/work/cont003/dsm/p24cozic/INPUT_INCA/IGCM_OUT/LMDZORINCA/NMHC_AER
+# Attention login depend de la machine
+
+#========================================================================
+#D-- Post -
+[Post]
+#D- Do we rebuild parallel output, this flag determines
+#D- frequency of rebuild submission
+RebuildFrequency=1Y
+#D- Do we rebuild parallel output from archive
+RebuildFromArchive=NONE
+#D- If you want to produce time series, this flag determines
+#D- frequency of post-processing submission
+TimeSeriesFrequency=NONE
+#D- If you want to produce seasonal average, this flag determines
+#D- the period of this average
+SeasonalFrequency=NONE
+#D-
+PackFrequency=1Y
+
+#========================================================================
+#D-- ATM -
+[ATM]
+#
+WriteFrequency="1M 1D HF"
+# If config_Restarts_OverRule == 'n' all params are read
+Restart= n
+# Last day of the experience used as restart
+RestartDate=2000-01-01
+# Define restart simulation name
+RestartJobName=JobName
+RestartPath=${ARCHIVE}/IGCM_OUT/LMDZORINCA/NMHC_AER
+# Old component name for restart (if empty, use new name)
+OldName=""
+
+
+#========================================================================
+#D-- SRF -
+[SRF]
+WriteFrequency="1M"
+Restart=n
+##-- Last day of the experience used as restart
+RestartDate=1999-12-30
+# Define restart simulation name
+RestartJobName=JobName
+RestartPath=${ARCHIVE}/IGCM_OUT/LMDZORINCA/NMHC_AER
+#-- Old component name for restart (if empty, use new name)
+OldName=""
+
+#========================================================================
+#D-- SBG - STOMATE
+[SBG]
+WriteFrequency="1M"
+# If config_Restarts_OverRule == 'n' next 4 params are read
+Restart=n
+#-- Last day of the experience used as restart for this component if Restart=y
+RestartDate=2000-01-31
+# Define restart simulation name for this component
+RestartJobName=EXP00
+RestartPath=${ARCHIVE}/IGCM_OUT/LMDZOR/DEVT/amip
+#-- Old component name for restart (if empty, use new name)
+OldName=
+
+#========================================================================
+#D-- CHM -
+[CHM]
+WriteFrequency="1M"
+Restart=n
+#D-- Last day of the experience used as restart
+RestartDate=2000-01-01
+#D-- Define restart simulation name
+RestartJobName=JobName
+RestartPath=${ARCHIVE}/IGCM_OUT/LMDZORINCA/NMHC_AER
+#D-- Old component name for restart (if empty, use new name)
+OldName=""
+
+#========================================================================
+#D-- IOS -
+[IOS]
+WriteFrequency=""
+# If config_Restarts_OverRule == 'n' next 4 params are read
+Restart= n
+##-- Last day of the experience used as restart for this component if Restart=y
+RestartDate=
+# Define restart simulation name for this component
+RestartJobName=
+RestartPath=
+# Old component name for restart (if empty, use new name)
+OldName=
+
+#========================================================================
Index: CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/NMHC_AER/COMP/inca.card
===================================================================
--- CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/NMHC_AER/COMP/inca.card	(revision 2388)
+++ CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/NMHC_AER/COMP/inca.card	(revision 2391)
@@ -55,5 +55,10 @@
 [OutputFiles]
 List=	(inca_avgr.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_inca_avgr.nc,    Post_1M_inca_avgr  ),\
-	(inca_test_xios.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_inca_test_xios.nc,    NONE  ),\
+	(inca_emi_xios.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_inca_emi_xios.nc,    NONE  ),\
+	(inca_species_xios.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_inca_species_xios.nc,    NONE  ),\
+	(inca_dvel_xios.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_inca_dvel_xios.nc,    NONE  ),\
+	(inca_aero_xios.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_inca_aero_xios.nc,    NONE  ),\
+	(inca_common_xios.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_inca_common_xios.nc,    NONE  ),\
+	(inca_washrate_xios.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_inca_washrate_xios.nc,    NONE  ),\
 	(forcage.nc,      ${R_OUT_CHM_O_M}/${PREFIX}_1M_forcage.nc,      NONE)
 
Index: CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/NMHC_AER/COMP/xios.card
===================================================================
--- CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/NMHC_AER/COMP/xios.card	(revision 2391)
+++ CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/NMHC_AER/COMP/xios.card	(revision 2391)
@@ -0,0 +1,29 @@
+[Compatibility]
+libIGCM=1.0
+
+[UserChoices]
+
+[InitialStateFiles]
+List=	()
+
+[BoundaryFiles]
+List=	()
+ListNonDel= ()
+
+[SmoothFiles]
+List=	()
+
+[ParametersFiles]
+List=	()
+
+[RestartFiles]
+List=	(NONE)
+
+[OutputText]
+List=   ()
+
+[OutputFiles]
+List=   ()
+
+
+
Index: CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/NMHC_AER/config.card
===================================================================
--- CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/NMHC_AER/config.card	(revision 2388)
+++ CONFIG/UNIFORM/v6/LMDZORINCA_v6/EXPERIMENTS/LMDZORINCA/NMHC_AER/config.card	(revision 2391)
@@ -13,8 +13,8 @@
 #============================
 #D-- (<8 chars MAX for JobName)
-JobName=L5OI4run
-#SpaceName=TEST
-#ExperimentName=XXXX
-LongName='nouvelles configs + LMDZ5 INCA4 39 '
+JobName=L5OI5run
+SpaceName=PROD
+ExperimentName=NITRATE
+LongName='nouvelles configs + LMDZ5 INCA5 39 + Xios + possibilite nouvelle physique '
 TagName=LMDZORINCA/${CHEM}
 #D- Choice of experiment in EXPERIEMENTS directory
@@ -47,8 +47,9 @@
 [ListOfComponents]
 #D- For each component, Name of component, Tag of component
-ATM= (lmdz, LMDZ4)
+ATM= (lmdz, LMDZ5)
 SRF= (orchidee, orchidee_1_9_5)
 SBG= (stomate, ORCHIDEE_1_9_5)
-CHM= (inca, INCA3) 
+CHM= (inca, INCA5) 
+IOS= (xios, XIOS)
 
 #========================================================================
@@ -57,8 +58,9 @@
 Name=gcm.e
 #D- For each component, Real name of executable, Name of executable for oasis
-ATM= (gcm.e, gcm.e)
+ATM= (gcm.e, gcm.e, 32MPI, 1OMP)
 SRF= ("", "")
 SBG= ("", "")
-CHM= (inca.dat, inca.dat)
+CHM= (inca.dat, inca.dat, 1MPI)
+IOS= (xios_server.exe, xios.x, 1MPI)
 
 #========================================================================
@@ -149,2 +151,16 @@
 
 #========================================================================
+#D-- IOS -
+[IOS]
+WriteFrequency=""
+# If config_Restarts_OverRule == 'n' next 4 params are read
+Restart= n
+##-- Last day of the experience used as restart for this component if Restart=y
+RestartDate=
+# Define restart simulation name for this component
+RestartJobName=
+RestartPath=
+# Old component name for restart (if empty, use new name)
+OldName=
+
+#========================================================================
