| 1 | #!/bin/bash |
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| 2 | #------------------------------------------------------ |
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| 3 | switchtotar=0 |
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| 4 | maxtries=3 |
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| 5 | #--------------------------------------------- |
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| 6 | while [ $# -ne 0 ] |
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| 7 | do |
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| 8 | case $1 in |
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| 9 | --switchtotar) |
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| 10 | switchtotar=1 |
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| 11 | shift 1 ;; |
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| 12 | --maxtries) |
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| 13 | maxtries=$2 |
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| 14 | shift 2 ;; |
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| 15 | -h|--help|-help) |
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| 16 | echo "----------------------------------------------------------------------------" |
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| 17 | echo "Usage: enlarge_my_files.sh [--switchtotar] [--maxtries N] dirin dirout" |
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| 18 | echo |
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| 19 | echo "Description:" |
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| 20 | echo " Pass a ncrcat, tar or cp command on files from prepared sets of files." |
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| 21 | echo " For ncrcat command 2 shots will be done at each try". |
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| 22 | echo |
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| 23 | echo " A status file and a log file will be created in output_ncrcat directory." |
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| 24 | echo " Copy a set to output_tar directory for later processing after N tries." |
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| 25 | echo |
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| 26 | echo "Arguments:" |
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| 27 | echo " dirin is the input directory where files to concatenate will be read" |
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| 28 | echo " dirout is the output directory where concatenated files will be written" |
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| 29 | echo |
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| 30 | echo " The following directory must exist where the command enlarge_my_files is run:" |
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| 31 | echo " enlarge_my_files" |
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| 32 | echo " |-- output_ncrcat" |
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| 33 | echo " | |-- set_000001.list" |
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| 34 | echo " | |-- set_000002.list" |
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| 35 | echo " | |-- set_000003.list" |
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| 36 | echo " | |-- set_000004.list" |
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| 37 | echo " | \`-- set_000005.list" |
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| 38 | echo " \`-- output_tar" |
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| 39 | echo |
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| 40 | echo "Options:" |
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| 41 | echo " -h, --help, -help" |
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| 42 | echo " Print this manual." |
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| 43 | echo " --switchtotar" |
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| 44 | echo " Abort ncrcat operation and switch to tar command" |
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| 45 | echo " --maxtries N" |
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| 46 | echo " Maximum number of tries before switching to tar command" |
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| 47 | echo " Default is 3" |
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| 48 | echo |
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| 49 | echo "----------------------------------------------------------------------------" |
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| 50 | exit ;; |
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| 51 | -*) |
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| 52 | `dirname $0`/enlarge_my_files.sh -h |
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| 53 | exit ;; |
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| 54 | *) |
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| 55 | break ;; |
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| 56 | esac |
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| 57 | done |
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| 58 | |
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| 59 | if [ $# -lt 2 ] ; then |
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| 60 | `dirname $0`/enlarge_my_files.sh -h |
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| 61 | exit |
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| 62 | fi |
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| 63 | |
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| 64 | if [[ ! -d $PATH_SIMU/output_ncrcat || ! -d $PATH_SIMU/output_tar || ! -d $PATH_SIMU/restart_tar || ! -d $PATH_SIMU/store_cp || ! -d $PATH_SIMU/work_cp || ! -d $PATH_SIMU/debug_tar || ! -d $PATH_SIMU/other_tar ]] ; then |
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| 65 | `dirname $0`/enlarge_my_files.sh -h |
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| 66 | exit |
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| 67 | fi |
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| 68 | |
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| 69 | #------------------------------------------------------ |
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| 70 | dirin=$1 |
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| 71 | dirout=$2 |
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| 72 | dirout_work=$3 |
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| 73 | |
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| 74 | #------------------------------------------------------ |
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| 75 | function find_varstoexclude { |
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| 76 | nbfile=0 |
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| 77 | for file in `cat $1` ; do |
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| 78 | # ncdump -h ${file} | gawk '{if (match($0, /(byte|char|short|int|float|double) (.*)\(/, arr)) print arr[2] }' >> tmp_$$.txt |
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| 79 | ncdump -h ${file} | grep -Ew "byte|char|short|int|float|double" | awk -F\( '{split($1,a," ") ; split($2,b,")") ; if (a[2] != b[1]) print a[2]}' >> tmp_$$.txt |
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| 80 | let nbfile=nbfile+1 |
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| 81 | done |
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| 82 | |
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| 83 | varstoexclude=`cat tmp_$$.txt | sort | uniq -c | awk -v nbfile=$nbfile '{if ($1 != nbfile) {print $2}}' | paste -s -d','` |
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| 84 | varstoexcludefiltered=`cat tmp_$$.txt | sort | uniq -c | awk -v nbfile=$nbfile '{if (($1 != nbfile) && !(match($2, /t_inst_(.*)/))) {print $2}}' | paste -s -d','` |
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| 85 | nbvars=`echo $varstoexcludefiltered | gawk -F',' '{print NF}'` |
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| 86 | |
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| 87 | rm -f tmp_$$.txt |
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| 88 | |
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| 89 | return 0 |
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| 90 | } |
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| 91 | |
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| 92 | # gpdebug : pour test showPackProgress.sh ************************* |
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| 93 | export RANDOM=$$ |
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| 94 | |
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| 95 | function gives_0_or_1 |
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| 96 | { |
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| 97 | bit=-1 |
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| 98 | let "bit = RANDOM % 2" |
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| 99 | echo $bit |
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| 100 | } |
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| 101 | |
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| 102 | resultCmd= |
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| 103 | # gpdebug : ****************************** fin ******************** |
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| 104 | |
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| 105 | |
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| 106 | #********** gpdebug : mesure d'intervalles de temps *************** |
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| 107 | function getDateMilliSeconds |
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| 108 | { |
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| 109 | test=`date +%s%N` |
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| 110 | testnum=${#test} |
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| 111 | millisec=${test:0:$testnum-6} |
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| 112 | echo "$millisec" |
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| 113 | } |
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| 114 | |
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| 115 | function getTimeDiffSeconds |
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| 116 | { |
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| 117 | startTimeMilliSec=$1 |
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| 118 | endTimeMilliSec=$( getDateMilliSeconds ) |
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| 119 | |
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| 120 | diffMilliSec=$(( $endTimeMilliSec - $startTimeMilliSec )) |
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| 121 | |
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| 122 | diffSeconds=$(awk 'BEGIN { print '$diffMilliSec'/'1000' }') |
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| 123 | echo "$diffSeconds" |
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| 124 | |
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| 125 | } |
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| 126 | # gpdebug : ****************************** fin ******************** |
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| 127 | #------------------------------------------------------ |
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| 128 | for set in $( ls $PATH_SIMU/output_ncrcat/*list ) ; do |
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| 129 | |
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| 130 | #----------------------------------- |
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| 131 | echo "#-------------------" |
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| 132 | echo "Set: $set" |
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| 133 | datestr=`LC_ALL=C date +"%Y%m%dT%H%M%S"` |
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| 134 | datestr1=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
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| 135 | statusfile=${set%%.list}.status |
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| 136 | logfile=${set%%.list}_${datestr}.log |
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| 137 | |
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| 138 | #----------------------------------- |
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| 139 | # Create status file if not exists |
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| 140 | if [ ! -e $statusfile ] ; then |
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| 141 | echo "# Status ; DateStart ; DateEnd ; Command ; TarFileExists" > $statusfile |
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| 142 | fi |
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| 143 | |
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| 144 | #----------------------------------- |
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| 145 | # Switch to tar command |
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| 146 | if [ $switchtotar -eq 1 ] ; then |
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| 147 | echo "====> DELEGATE to tar command with option --switchtotar" |
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| 148 | echo "DELEGATE to tar command with option --switchtotar" >> $statusfile |
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| 149 | mv $set $PATH_SIMU/output_tar |
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| 150 | continue |
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| 151 | fi |
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| 152 | |
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| 153 | #----------------------------------- |
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| 154 | # Skip the set if last line of the status file is "COMPLETED" or "DELEGATE" |
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| 155 | if tail -1 $statusfile | grep -q -E '(COMPLETED|DELEGATE)' ; then |
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| 156 | printf "====> " |
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| 157 | tail -1 $statusfile |
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| 158 | continue |
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| 159 | fi |
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| 160 | |
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| 161 | #----------------------------------- |
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| 162 | # nbtries = number of lines from status file (first comment line gives 1 for the first try) |
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| 163 | nbtries=`wc -l $statusfile | cut -d' ' -f1` |
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| 164 | echo "Nb of tries: $nbtries" |
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| 165 | |
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| 166 | #----------------------------------- |
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| 167 | # Set output file name from list name |
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| 168 | |
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| 169 | fileout1=$( basename $set ) |
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| 170 | fileout=${fileout1%.list} |
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| 171 | |
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| 172 | filefirst=`head -n 1 $set` |
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| 173 | diroutputfile=`dirname $filefirst | sed -e "s%$dirin%$dirout%"` |
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| 174 | |
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| 175 | outputfile=$diroutputfile/${fileout} |
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| 176 | mkdir -p $diroutputfile |
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| 177 | echo "Output file to write: $outputfile" |
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| 178 | |
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| 179 | #----------------------------------- |
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| 180 | # Find variables to exclude to have homogeneous files (always exclude 't_inst_.*') |
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| 181 | extratar=0 |
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| 182 | find_varstoexclude $set |
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| 183 | if [ $nbvars -eq 0 ] ; then |
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| 184 | varstoexclude="t_inst_.*" |
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| 185 | else |
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| 186 | # There are others variables than 't_inst_.*' so an extra tar file will be created |
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| 187 | varstoexclude="t_inst_.*,$varstoexcludefiltered" |
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| 188 | extratar=1 |
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| 189 | # Copy to output_tar directory |
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| 190 | echo "====> COPY to tar command because find other variables ($varstoexcludefiltered) than t_inst_*" |
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| 191 | echo "COPY to tar command because find other variables ($varstoexcludefiltered) than t_inst_*" >> $statusfile |
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| 192 | cp $set $PATH_SIMU/output_tar |
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| 193 | fi |
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| 194 | |
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| 195 | #----------------------------------- |
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| 196 | # Try 2 times before fire "FAILED" |
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| 197 | ncrcatcmd=ncrcat |
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| 198 | ncrcatoptions="--md5_digest" |
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| 199 | # ncrcatoptions="" |
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| 200 | |
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| 201 | startTime=$( getDateMilliSeconds ) # gpdebug : time |
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| 202 | cat $set | $ncrcatcmd $ncrcatoptions -O -x -v $varstoexclude -o $outputfile > $logfile 2>&1 # gpdebug : a retablir |
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| 203 | meantime=$( getTimeDiffSeconds $startTime ) # gpdebug : time |
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| 204 | |
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| 205 | # resultCmd=$( gives_0_or_1 ) |
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| 206 | # resultCmd=1 |
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| 207 | # if [ $resultCmd -eq 0 ] ; then |
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| 208 | if [ $? -eq 0 ] ; then |
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| 209 | sed -i "1i\meantime:${meantime}" $statusfile # gpdebug : time |
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| 210 | datestr2=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
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| 211 | echo "DONE ; $datestr1 ; $datestr2 ; cat $set | $ncrcatcmd $ncrcatoptions -O -x -v '$varstoexclude' -o $outputfile ; $logfile ; $extratar" >> $statusfile |
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| 212 | echo "====> COMPLETED at try #$nbtries (at 1st shot on 2)" |
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| 213 | echo "COMPLETED at try #$nbtries (at 1st shot on 2)" >> $statusfile |
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| 214 | else |
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| 215 | # Add --md5_digest |
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| 216 | startTime=$( getDateMilliSeconds ) # gpdebug : time |
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| 217 | cat $set | $ncrcatcmd $ncrcatoptions -O -x -v $varstoexclude -o $outputfile > $logfile 2>&1 # gpdebug : a retablir |
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| 218 | meantime=$( getTimeDiffSeconds $startTime ) # gpdebug : time |
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| 219 | # resultCmd=$( gives_0_or_1 ) |
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| 220 | # resultCmd=1 |
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| 221 | # if [ $resultCmd -eq 0 ] ; then |
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| 222 | if [ $? -eq 0 ] ; then |
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| 223 | sed -i "1i\meantime:${meantime}" $statusfile # gpdebug : time |
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| 224 | datestr2=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
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| 225 | echo "DONE ; $datestr1 ; $datestr2 ; cat $set | $ncrcatcmd $ncrcatoptions -O -x -v '$varstoexclude' -o $outputfile ; $logfile ; $extratar" >> $statusfile |
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| 226 | echo "====> COMPLETED at try #$nbtries (at 2nd shot on 2)" |
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| 227 | echo "COMPLETED at try #$nbtries (at 2nd shot on 2)" >> $statusfile |
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| 228 | else |
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| 229 | datestr2=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
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| 230 | echo "====> FAILED at try #$nbtries" |
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| 231 | echo "FAILED at try #$nbtries ; $datestr1 ; $datestr2 ; cat $set | $ncrcatcmd $ncrcatoptions -O -x -v '$varstoexclude' -o $outputfile ; $logfile ; $extratar" >> $statusfile |
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| 232 | if [ $nbtries -ge $maxtries ] ; then |
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| 233 | echo "====> DELEGATE to tar command after $nbtries tries (maxtries=$maxtries)" |
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| 234 | echo "DELEGATE to tar command after $nbtries tries (maxtries=$maxtries)" >> $statusfile |
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| 235 | cp $set $PATH_SIMU/output_tar # gpdebug : a retablir |
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| 236 | fi |
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| 237 | fi |
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| 238 | fi |
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| 239 | |
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| 240 | done |
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| 241 | |
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| 242 | #------------------------------------------------------ |
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| 243 | |
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| 244 | for set in $( ls $PATH_SIMU/output_tar/*list ) ; do |
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| 245 | |
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| 246 | #----------------------------------- |
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| 247 | echo "#-------------------" |
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| 248 | echo "Set: $set" |
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| 249 | datestr=`LC_ALL=C date +"%Y%m%dT%H%M%S"` |
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| 250 | datestr1=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
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| 251 | statusfile=${set%%.list}.status |
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| 252 | logfile=${set%%.list}_${datestr}.log |
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| 253 | |
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| 254 | #----------------------------------- |
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| 255 | # Create status file if not exists |
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| 256 | if [ ! -e $statusfile ] ; then |
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| 257 | echo "# Status ; DateStart ; DateEnd ; Command ; TarFileExists" > $statusfile |
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| 258 | fi |
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| 259 | |
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| 260 | #----------------------------------- |
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| 261 | # Skip the set if last line of the status file is "COMPLETED" or "DELEGATE" |
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| 262 | if tail -1 $statusfile | grep -q -E '(COMPLETED|DELEGATE)' ; then |
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| 263 | printf "====> " |
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| 264 | tail -1 $statusfile |
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| 265 | continue |
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| 266 | fi |
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| 267 | |
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| 268 | #----------------------------------- |
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| 269 | # nbtries = number of lines from status file (first comment line gives 1 for the first try) |
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| 270 | # nbtries=`wc -l $statusfile | cut -d' ' -f1` |
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| 271 | # echo "Nb of tries: $nbtries" |
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| 272 | |
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| 273 | #----------------------------------- |
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| 274 | # Set output file name from list name |
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| 275 | |
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| 276 | fileout1=$( basename $set ) |
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| 277 | fileout=${fileout1%.list}.tar |
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| 278 | |
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| 279 | filefirst=`head -n 1 $set` |
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| 280 | dirinputfile=`dirname $filefirst` |
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| 281 | diroutputfile=`dirname $filefirst | sed -e "s%$dirin%$dirout%"` |
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| 282 | |
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| 283 | outputfile=$diroutputfile/${fileout} |
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| 284 | mkdir -p $diroutputfile |
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| 285 | echo "Output file to write: $outputfile" |
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| 286 | |
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| 287 | #----------------------------------- |
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| 288 | # Try 1 time before fire "FAILED" |
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| 289 | # Waiting for CCRT command |
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| 290 | tarcmd=tar |
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| 291 | taroptions="--format=posix -W -cf" |
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| 292 | #taroptions="--format=posix -cf" |
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| 293 | cd $dirinputfile |
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| 294 | |
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| 295 | set_local=$set".local" |
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| 296 | for file in $( cat $set) ; do |
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| 297 | basename $file >> $set".local" |
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| 298 | done |
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| 299 | |
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| 300 | # #----------------------------------- |
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| 301 | startTime=$( getDateMilliSeconds ) # gpdebug : time |
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| 302 | $tarcmd $taroptions $outputfile --dereference --files-from $set.local > $logfile 2>&1 # gpdebug : a retablir |
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| 303 | meantime=$( getTimeDiffSeconds $startTime ) # gpdebug : time |
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| 304 | |
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| 305 | # resultCmd=$( gives_0_or_1 ) |
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| 306 | # if [ $resultCmd -eq 0 ] ; then |
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| 307 | if [ $? -eq 0 ] ; then |
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| 308 | sed -i "1i\meantime:${meantime}" $statusfile # gpdebug : time |
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| 309 | datestr2=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
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| 310 | echo "DONE ; $datestr1 ; $datestr2 ; $tarcmd $taroptions $outputfile $(cat $set); $logfile" >> $statusfile |
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| 311 | echo "====> COMPLETED at try #$nbtries (at 1st shot on 1)" |
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| 312 | echo "COMPLETED at try #$nbtries (at 1st shot on 1)" >> $statusfile |
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| 313 | else |
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| 314 | datestr2=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
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| 315 | echo "====> FAILED at try #$nbtries" |
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| 316 | echo "FAILED at try #$nbtries ; $datestr1 ; $datestr2 ; $tarcmd $taroptions $outputfile $(cat $set) ; $logfile" >> $statusfile |
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| 317 | |
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| 318 | fi |
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| 319 | rm -f $set".local" |
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| 320 | #----------------------------------- |
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| 321 | |
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| 322 | done |
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| 323 | |
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| 324 | |
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| 325 | #------------------------------------------------------ |
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| 326 | |
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| 327 | for set in $( ls $PATH_SIMU/restart_tar/*list ) ; do |
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| 328 | |
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| 329 | #----------------------------------- |
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| 330 | echo "#-------------------" |
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| 331 | echo "Set: $set" |
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| 332 | datestr=`LC_ALL=C date +"%Y%m%dT%H%M%S"` |
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| 333 | datestr1=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
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| 334 | statusfile=${set%%.list}.status |
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| 335 | logfile=${set%%.list}_${datestr}.log |
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| 336 | |
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| 337 | #----------------------------------- |
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| 338 | # Create status file if not exists |
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| 339 | if [ ! -e $statusfile ] ; then |
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| 340 | echo "# Status ; DateStart ; DateEnd ; Command ; TarFileExists" > $statusfile |
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| 341 | fi |
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| 342 | |
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| 343 | #----------------------------------- |
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| 344 | # Skip the set if last line of the status file is "COMPLETED" or "DELEGATE" |
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| 345 | if tail -1 $statusfile | grep -q -E '(COMPLETED|DELEGATE)' ; then |
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| 346 | printf "====> " |
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| 347 | tail -1 $statusfile |
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| 348 | continue |
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| 349 | fi |
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| 350 | |
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| 351 | #----------------------------------- |
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| 352 | # nbtries = number of lines from status file (first comment line gives 1 for the first try) |
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| 353 | # nbtries=`wc -l $statusfile | cut -d' ' -f1` |
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| 354 | # echo "Nb of tries: $nbtries" |
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| 355 | |
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| 356 | #----------------------------------- |
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| 357 | # Set output file name from list name |
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| 358 | dirin1=$PATH_SIMU/RESTART |
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| 359 | dirin2=${dirin1##${IGCM_DEM}} |
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| 360 | dirin3=${dirin2##/$( basename ${INPUT_DMF_DATA} )} |
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| 361 | diroutputfile=${OUTPUT_STORE}${dirin3} |
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| 362 | fileout1=$( basename $set ) |
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| 363 | fileout=${fileout1%.list}.tar |
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| 364 | outputfile=$diroutputfile/${fileout} |
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| 365 | mkdir -p $diroutputfile |
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| 366 | echo "Output file to write: $outputfile" |
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| 367 | |
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| 368 | #----------------------------------- |
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| 369 | # Try 1 time before fire "FAILED" |
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| 370 | # Waiting for CCRT command |
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| 371 | tarcmd=tar |
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| 372 | taroptions="--format=posix -W -cf" |
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| 373 | # taroptions="--format=posix -cf" |
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| 374 | cd $dirin1 |
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| 375 | # ls |
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| 376 | |
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| 377 | startTime=$( getDateMilliSeconds ) # gpdebug : time |
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| 378 | $tarcmd $taroptions $outputfile --dereference --files-from $set > $logfile 2>&1 # gpdebug : a retablir |
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| 379 | meantime=$( getTimeDiffSeconds $startTime ) # gpdebug : time |
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| 380 | |
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| 381 | # resultCmd=$( gives_0_or_1 ) |
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| 382 | # if [ $resultCmd -eq 0 ] ; then |
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| 383 | if [ $? -eq 0 ] ; then |
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| 384 | sed -i "1i\meantime:${meantime}" $statusfile # gpdebug : time |
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| 385 | datestr2=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
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| 386 | echo "DONE ; $datestr1 ; $datestr2 ; $tarcmd $taroptions $outputfile $(cat $set); $logfile" >> $statusfile |
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| 387 | echo "====> COMPLETED at try #$nbtries (at 1st shot on 1)" |
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| 388 | echo "COMPLETED at try #$nbtries (at 1st shot on 1)" >> $statusfile |
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| 389 | else |
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| 390 | datestr2=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
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| 391 | echo "====> FAILED at try #$nbtries" |
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| 392 | echo "FAILED at try #$nbtries ; $datestr1 ; $datestr2 ; $tarcmd $taroptions $outputfile $(cat $set) ; $logfile" >> $statusfile |
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| 393 | |
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| 394 | fi |
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| 395 | |
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| 396 | #----------------------------------- |
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| 397 | |
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| 398 | done |
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| 399 | |
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| 400 | #------------------------------------------------------ |
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| 401 | for set in $( ls $PATH_SIMU/debug_tar/*list ) ; do |
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| 402 | |
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| 403 | #----------------------------------- |
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| 404 | echo "#-------------------" |
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| 405 | echo "Set: $set" |
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| 406 | datestr=`LC_ALL=C date +"%Y%m%dT%H%M%S"` |
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| 407 | datestr1=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
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| 408 | statusfile=${set%%.list}.status |
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| 409 | logfile=${set%%.list}_${datestr}.log |
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| 410 | |
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| 411 | #----------------------------------- |
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| 412 | # Create status file if not exists |
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| 413 | if [ ! -e $statusfile ] ; then |
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| 414 | echo "# Status ; DateStart ; DateEnd ; Command ; TarFileExists" > $statusfile |
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| 415 | fi |
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| 416 | |
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| 417 | #----------------------------------- |
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| 418 | # Skip the set if last line of the status file is "COMPLETED" or "DELEGATE" |
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| 419 | if tail -1 $statusfile | grep -q -E '(COMPLETED|DELEGATE)' ; then |
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| 420 | printf "====> " |
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| 421 | tail -1 $statusfile |
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| 422 | continue |
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| 423 | fi |
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| 424 | |
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| 425 | #----------------------------------- |
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| 426 | # nbtries = number of lines from status file (first comment line gives 1 for the first try) |
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| 427 | # nbtries=`wc -l $statusfile | cut -d' ' -f1` |
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| 428 | # echo "Nb of tries: $nbtries" |
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| 429 | |
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| 430 | #----------------------------------- |
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| 431 | # Set output file name from list name |
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| 432 | dirin1=$PATH_SIMU/DEBUG |
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| 433 | dirin2=${dirin1##${IGCM_DEM}} |
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| 434 | dirin3=${dirin2##/$( basename ${INPUT_DMF_DATA} )} |
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| 435 | diroutputfile=${OUTPUT_STORE}${dirin3} |
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| 436 | fileout1=$( basename $set ) |
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| 437 | fileout=${fileout1%.list}.tar |
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| 438 | outputfile=$diroutputfile/${fileout} |
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| 439 | mkdir -p $diroutputfile |
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| 440 | echo "Output file to write: $outputfile" |
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| 441 | |
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| 442 | #----------------------------------- |
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| 443 | # Try 1 time before fire "FAILED" |
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| 444 | # Waiting for CCRT command |
|---|
| 445 | tarcmd=tar |
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| 446 | taroptions="--format=posix -W -cf" |
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| 447 | # taroptions="--format=posix -cf" |
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| 448 | cd $dirin1 |
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| 449 | # ls |
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| 450 | |
|---|
| 451 | startTime=$( getDateMilliSeconds ) # gpdebug : time |
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| 452 | $tarcmd $taroptions $outputfile --dereference --files-from $set > $logfile 2>&1 # gpdebug : a retablir |
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| 453 | meantime=$( getTimeDiffSeconds $startTime ) # gpdebug : time |
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| 454 | |
|---|
| 455 | # resultCmd=$( gives_0_or_1 ) |
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| 456 | # if [ $resultCmd -eq 0 ] ; then |
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| 457 | if [ $? -eq 0 ] ; then |
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| 458 | sed -i "1i\meantime:${meantime}" $statusfile # gpdebug : time |
|---|
| 459 | datestr2=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
|---|
| 460 | echo "DONE ; $datestr1 ; $datestr2 ; $tarcmd $taroptions $outputfile $(cat $set); $logfile" >> $statusfile |
|---|
| 461 | echo "====> COMPLETED at try #$nbtries (at 1st shot on 1)" |
|---|
| 462 | echo "COMPLETED at try #$nbtries (at 1st shot on 1)" >> $statusfile |
|---|
| 463 | else |
|---|
| 464 | datestr2=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
|---|
| 465 | echo "====> FAILED at try #$nbtries" |
|---|
| 466 | echo "FAILED at try #$nbtries ; $datestr1 ; $datestr2 ; $tarcmd $taroptions $outputfile $(cat $set) ; $logfile" >> $statusfile |
|---|
| 467 | |
|---|
| 468 | fi |
|---|
| 469 | |
|---|
| 470 | #----------------------------------- |
|---|
| 471 | |
|---|
| 472 | done |
|---|
| 473 | |
|---|
| 474 | #------------------------------------------------------ |
|---|
| 475 | for set in $( ls $PATH_SIMU/store_cp/*list ) ; do |
|---|
| 476 | |
|---|
| 477 | #----------------------------------- |
|---|
| 478 | echo "#-------------------" |
|---|
| 479 | echo "Set: $set" |
|---|
| 480 | datestr=`LC_ALL=C date +"%Y%m%dT%H%M%S"` |
|---|
| 481 | datestr1=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
|---|
| 482 | statusfile=${set%%.list}.status |
|---|
| 483 | logfile=${set%%.list}_${datestr}.log |
|---|
| 484 | |
|---|
| 485 | #----------------------------------- |
|---|
| 486 | # Create status file if not exists |
|---|
| 487 | if [ ! -e $statusfile ] ; then |
|---|
| 488 | echo "# Status ; DateStart ; DateEnd ; Command ; TarFileExists" > $statusfile |
|---|
| 489 | fi |
|---|
| 490 | |
|---|
| 491 | #----------------------------------- |
|---|
| 492 | # Skip the set if last line of the status file is "COMPLETED" or "DELEGATE" |
|---|
| 493 | if tail -1 $statusfile | grep -q -E '(COMPLETED|DELEGATE)' ; then |
|---|
| 494 | printf "====> " |
|---|
| 495 | tail -1 $statusfile |
|---|
| 496 | continue |
|---|
| 497 | fi |
|---|
| 498 | |
|---|
| 499 | #----------------------------------- |
|---|
| 500 | # nbtries = number of lines from status file (first comment line gives 1 for the first try) |
|---|
| 501 | # nbtries=`wc -l $statusfile | cut -d' ' -f1` |
|---|
| 502 | # echo "Nb of tries: $nbtries" |
|---|
| 503 | |
|---|
| 504 | #----------------------------------- |
|---|
| 505 | # Set output file name from first and last files from the current set |
|---|
| 506 | for file in $( cat $set) ; do |
|---|
| 507 | |
|---|
| 508 | diroutputfile=`dirname $file | sed -e "s%$dirin%$dirout%"` |
|---|
| 509 | mkdir -p $diroutputfile |
|---|
| 510 | echo "Output file to write: $diroutputfile/$( basename $file )" |
|---|
| 511 | |
|---|
| 512 | #----------------------------------- |
|---|
| 513 | # Try 1 time before fire "FAILED" |
|---|
| 514 | # Waiting for CCRT command |
|---|
| 515 | cpcmd="cp " |
|---|
| 516 | cpoptions="-rf" |
|---|
| 517 | startTime=$( getDateMilliSeconds ) # gpdebug : time |
|---|
| 518 | $cpcmd $cpoptions $file $diroutputfile > $logfile 2>&1 # gpdebug : a retablir |
|---|
| 519 | meantime=$( getTimeDiffSeconds $startTime ) # gpdebug : time |
|---|
| 520 | done |
|---|
| 521 | |
|---|
| 522 | # resultCmd=$( gives_0_or_1 ) |
|---|
| 523 | # if [ $resultCmd -eq 0 ] ; then |
|---|
| 524 | if [ $? -eq 0 ] ; then |
|---|
| 525 | sed -i "1i\meantime:${meantime}" $statusfile # gpdebug : time |
|---|
| 526 | datestr2=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
|---|
| 527 | echo "DONE ; $datestr1 ; $datestr2 ; $cpcmd $cpoptions $file $diroutputfile ; $logfile" >> $statusfile |
|---|
| 528 | echo "====> COMPLETED at try #$nbtries (at 1st shot on 1)" |
|---|
| 529 | echo "COMPLETED at try #$nbtries (at 1st shot on 1)" >> $statusfile |
|---|
| 530 | else |
|---|
| 531 | datestr2=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
|---|
| 532 | echo "====> FAILED at try #$nbtries" |
|---|
| 533 | echo "FAILED at try #$nbtries ; $datestr1 ; $datestr2 ; $cpcmd $cpoptions $file $diroutputfile ; $logfile" >> $statusfile |
|---|
| 534 | |
|---|
| 535 | fi |
|---|
| 536 | |
|---|
| 537 | #----------------------------------- |
|---|
| 538 | |
|---|
| 539 | done |
|---|
| 540 | |
|---|
| 541 | #------------------------------------------------------ |
|---|
| 542 | for set in $( ls $PATH_SIMU/work_cp/*list ) ; do |
|---|
| 543 | |
|---|
| 544 | #----------------------------------- |
|---|
| 545 | echo "#-------------------" |
|---|
| 546 | echo "Set: $set" |
|---|
| 547 | datestr=`LC_ALL=C date +"%Y%m%dT%H%M%S"` |
|---|
| 548 | datestr1=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
|---|
| 549 | statusfile=${set%%.list}.status |
|---|
| 550 | logfile=${set%%.list}_${datestr}.log |
|---|
| 551 | |
|---|
| 552 | #----------------------------------- |
|---|
| 553 | # Create status file if not exists |
|---|
| 554 | if [ ! -e $statusfile ] ; then |
|---|
| 555 | echo "# Status ; DateStart ; DateEnd ; Command ; TarFileExists" > $statusfile |
|---|
| 556 | fi |
|---|
| 557 | |
|---|
| 558 | #----------------------------------- |
|---|
| 559 | # Skip the set if last line of the status file is "COMPLETED" or "DELEGATE" |
|---|
| 560 | if tail -1 $statusfile | grep -q -E '(COMPLETED|DELEGATE)' ; then |
|---|
| 561 | printf "====> " |
|---|
| 562 | tail -1 $statusfile |
|---|
| 563 | continue |
|---|
| 564 | fi |
|---|
| 565 | |
|---|
| 566 | #----------------------------------- |
|---|
| 567 | # nbtries = number of lines from status file (first comment line gives 1 for the first try) |
|---|
| 568 | # nbtries=`wc -l $statusfile | cut -d' ' -f1` |
|---|
| 569 | # echo "Nb of tries: $nbtries" |
|---|
| 570 | |
|---|
| 571 | #----------------------------------- |
|---|
| 572 | # Set output file name from first and last files from the current set |
|---|
| 573 | for file in $( cat $set) ; do |
|---|
| 574 | |
|---|
| 575 | diroutputfile=`dirname $file | sed -e "s%$dirin%$dirout_work%"` |
|---|
| 576 | mkdir -p $diroutputfile |
|---|
| 577 | echo "Output file to write: $diroutputfile/$( basename $file )" |
|---|
| 578 | |
|---|
| 579 | #----------------------------------- |
|---|
| 580 | # Try 1 time before fire "FAILED" |
|---|
| 581 | # Waiting for CCRT command |
|---|
| 582 | cpcmd="cp " |
|---|
| 583 | cpoptions="-rf" |
|---|
| 584 | startTime=$( getDateMilliSeconds ) # gpdebug : time |
|---|
| 585 | $cpcmd $cpoptions $file $diroutputfile > $logfile 2>&1 # gpdebug : a retablir |
|---|
| 586 | meantime=$( getTimeDiffSeconds $startTime ) # gpdebug : timeS |
|---|
| 587 | done |
|---|
| 588 | |
|---|
| 589 | # resultCmd=$( gives_0_or_1 ) |
|---|
| 590 | # if [ $resultCmd -eq 0 ] ; then |
|---|
| 591 | if [ $? -eq 0 ] ; then |
|---|
| 592 | sed -i "1i\meantime:${meantime}" $statusfile # gpdebug : time |
|---|
| 593 | datestr2=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
|---|
| 594 | echo "DONE ; $datestr1 ; $datestr2 ; $cpcmd $cpoptions $file $diroutputfile ; $logfile" >> $statusfile |
|---|
| 595 | echo "====> COMPLETED at try #$nbtries (at 1st shot on 1)" |
|---|
| 596 | echo "COMPLETED at try #$nbtries (at 1st shot on 1)" >> $statusfile |
|---|
| 597 | else |
|---|
| 598 | datestr2=`LC_ALL=C date +"%Y-%m-%dT%H:%M:%S"` |
|---|
| 599 | echo "====> FAILED at try #$nbtries" |
|---|
| 600 | echo "FAILED at try #$nbtries ; $datestr1 ; $datestr2 ; $cpcmd $cpoptions $file $diroutputfile ; $logfile" >> $statusfile |
|---|
| 601 | |
|---|
| 602 | fi |
|---|
| 603 | |
|---|
| 604 | #----------------------------------- |
|---|
| 605 | |
|---|
| 606 | done |
|---|
