#!/bin/bash #on veut archiver les fichiers restart #Dans le cadre du demenagement ils seront renommes #ATM/Restart/****.nc #OCE/Restart/****.nc #... #sous la forme #RESTART/ATM_****.nc #RESTART/OCE_****.nc #Attention de bien conserver les dates d'origines # #Dans le cadre de la production nouvelle chaine #ils auront directement le bon nom # #On veut egalement que l'archive soit par periode de temps # cette periode est definie par la taille du pack donc connue # en entree du script (1M, 1Y, 5Y, 10Y etc...) # # $1= PATH/config_card d'une simulation avec # TagName/JobName/ExperimentName/SpaceName/DateBegin/DateEnd/PATH_SIMUL # $2=period_pack en M/m ou Y/y config_card=${1} LISTE_DMNFS=${2} export JOB_DIR=${JOB_DIR:-${PWD}} export IGCM_DEM=${IGCM_DEM:-${SCRATCHDIR}/IGCM_DEM} export IGCM_TMP=${IGCM_TMP:-${IGCM_DEM}/tmp} mkdir -p ${IGCM_DEM} mkdir -p ${IGCM_TMP} clean_tmp=${clean_tmp:-yes} EXE_DIR=$(dirname ${0}) SCRIPT_NAME=$(basename ${0} ) source ${EXE_DIR}/DEM_utilities.sh DEM_log -0 "Demarrage de ${SCRIPT_NAME}" #### 0- lecture de config.card #### on veut les renseignements suivants : #### JobName, PATH_SIMUL, DateBegin et DateEnd eval $(grep JobName ${config_card}) eval $(grep PATH_SIMUL_FULL ${config_card}) eval $(grep DateBegin ${config_card}) eval $(grep DateEnd ${config_card}) eval $(grep IGCM_DEM_SIMU ${config_card}) #### Preparation de l'environnement # repertoire dans lequel seront crees les archives STORE_RESTART=$IGCM_DEM_SIMU/Restart mkdir -p ${STORE_RESTART} # lecture de periodpack dans ${IGCM_DEM_SIMU}/period_pack.txt period_pack=`awk '{print $0} ' ${IGCM_DEM_SIMU}/period_pack.txt` #### 1- renommer les fichiers ###### DEM_log -1 "Renommer les fichiers de Restart" cd ${STORE_RESTART} rm -rf * # On les copie sur le scratchdir en changeant le nom et conservant la date grep ${PATH_SIMUL_FULL} ${LISTE_DMNFS} | grep Restart | awk '{print $3}' | sed '/^.*Restart$/d' >> ${IGCM_DEM_SIMU}/liste_restart_files.txt #awk -F/ '{dest_name=$(NF-2)("_") $(NF); # system("cp --preserve " $0 " "dest_name)}' ${IGCM_DEM_SIMU}/liste_restart_files.txt gawk -F/ '{dest_name=$(NF-2)("_") $(NF); system("ln -s " $0 " "dest_name)}' ${IGCM_DEM_SIMU}/liste_restart_files.txt ls -l ${STORE_RESTART} > ${IGCM_DEM_SIMU}/new_liste_restart_files.txt ### 2- creer les listes de fichiers par periode #### DEM_log -1 "Creation des listes de fichiers par periode" ### 2.1- extraire l'annee et le mois de DateBegin ### date_begin=${DateBegin} date_end=${DateEnd} year_begin=$(echo ${date_begin} | cut -c 1-4 ) month_begin=$(echo ${date_begin} | cut -c 5-6 ) year_end=$(echo ${date_end} | cut -c 1-4 ) month_end=$(echo ${date_end} | cut -c 5-6 ) ### 2.2- creation des listes ### date_begin_pack=${date_begin} date_end_simulation=${date_end} month_begin_pack=${month_begin} year_begin_pack=${year_begin} number_pack=1 while [ ${date_begin_pack} -le ${date_end_simulation} ] do DEM_log -1 "On calcule la date de fin du pack " month_end_pack=${month_begin_pack} year_end_pack=`expr ${year_begin_pack} + ${period_pack}` if [ ${month_end_pack} -le 9 ] then date_end_pack=${year_end_pack}0${month_end_pack}01 fi if [ ${month_end_pack} -gt 9 ] then date_end_pack=${year_end_pack}${month_end_pack}01 fi for file in `awk '{print $9}' ${IGCM_DEM_SIMU}/new_liste_restart_files.txt`; do extract_date_file=`echo ${file} | sed -e "s/.*\${JobName}_//"` date_file=`echo ${extract_date_file}| sed 's/\([0-9]\{8\}\)_.*$/\1/g'` echo pack n°${number_pack} ${date_file} ${date_begin_pack} ${date_end_pack} if [ ${date_file} -lt ${date_end_pack} ] then if [ ${date_file} -ge ${date_begin_pack} ] then echo ${file} >> ${IGCM_TMP}/${$}.liste_pack_restart_${number_pack}.txt fi fi done #on archive les restart - le nom de l'archive contiendra ${yearbegin}${monthbegin}_${yearend}${monthend} # end etant la date du dernier fichier contenu et non pas la premiere date suivant DEM_log -1 "Recherche de la date de fin reel pour nommer l'archive " #On classe par ordre alphabetique les fichiers contenus dans liste_pack_restart #la date du dernier fichier donnera la date de fin du pack sort ${IGCM_TMP}/${$}.liste_pack_restart_${number_pack}.txt > ${IGCM_TMP}/${$}.liste_pack_restart_${number_pack}.txt.tmp last_file=$(tail -n 1 ${IGCM_TMP}/${$}.liste_pack_restart_${number_pack}.txt.tmp ) extract_date_file=$( echo ${last_file} | sed -e "s/.*${JobName}_//" ) echo ${extract_date_file} DateEnd_Restart=$( echo ${extract_date_file}| sed 's/\([0-9]\{8\}\)_.*$/\1/g' ) echo ${DateEnd_Restart} mv ${IGCM_TMP}/${$}.liste_pack_restart_${number_pack}.txt.tmp ${IGCM_DEM_SIMU}/liste_pack_restart_${date_begin_pack}_${DateEnd_Restart}.txt DEM_log -1 "Passage de la commande Tar pour archiver la liste creee" tar -cf ${JobName}_${date_begin_pack}_${DateEnd_Restart}_restart.tar --dereference --files-from ${IGCM_DEM_SIMU}/liste_pack_restart_${date_begin_pack}_${DateEnd_Restart}.txt # cat ${IGCM_DEM_SIMU}/liste_pack_restart_${number_pack}.txt | xargs rm DEM_log -1 "On defini le datebegin de la prochaine periode pack" #on defini la periode pack suivante month_begin_pack=${month_end_pack} year_begin_pack=${year_end_pack} if [ ${month_begin_pack} -le 9 ] then date_begin_pack=${year_begin_pack}0${month_begin_pack}01 fi if [ ${month_begin_pack} -gt 9 ] then date_begin_pack=${year_begin_pack}${month_begin_pack}01 fi number_pack=`expr ${number_pack} + 1` done