1 | #!/bin/bash |
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2 | set -e |
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3 | set -x |
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4 | |
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5 | |
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6 | InDir=. |
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7 | |
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8 | ncks -h -O -4 ${InDir}/cerfacs_grids.nc cerfacs_grids_netcdf4.nc |
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9 | ncks -4 -h -O -v nogh.lon,nogh.lat,nogh.clo,nogh.cla cerfacs_grids_netcdf4.nc ORCA025_coordinates_mask.nc |
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10 | ncrename -h -v nogh.lon,nav_lon_grid_T ORCA025_coordinates_mask.nc |
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11 | ncrename -h -v nogh.lat,nav_lat_grid_T ORCA025_coordinates_mask.nc |
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12 | ncrename -h -v nogh.clo,bounds_lon_grid_T ORCA025_coordinates_mask.nc |
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13 | ncrename -h -v nogh.cla,bounds_lat_grid_T ORCA025_coordinates_mask.nc |
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14 | |
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15 | ncks -h -O -4 ${InDir}/cerfacs_masks.nc cerfacs_masks_netcdf4.nc |
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16 | ncks -4 -h -A -v nogh.msk cerfacs_masks_netcdf4.nc ORCA025_coordinates_mask.nc |
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17 | ncrename -h -v nogh.msk,mask_T ORCA025_coordinates_mask.nc |
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18 | |
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19 | ncks -h -O -4 ${InDir}/cerfacs_areas.nc cerfacs_areas_netcdf4.nc |
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20 | ncks -4 -h -A -v nogh.srf cerfacs_areas_netcdf4.nc ORCA025_coordinates_mask.nc |
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21 | ncrename -h -v nogh.srf,area ORCA025_coordinates_mask.nc |
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22 | |
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23 | ncatted -h \ |
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24 | -a history,global,d,c,"" \ |
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25 | -a history_of_appended_files,global,d,c,"" \ |
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26 | ORCA025_coordinates_mask.nc |
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27 | |
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28 | ncpdq -O -h --permute nj,ni,jpcr ORCA025_coordinates_mask.nc tmp_ORCA025_coordinates_mask.nc ; mv tmp_ORCA025_coordinates_mask.nc ORCA025_coordinates_mask.nc |
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29 | |
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30 | ncrename -d jpcr,nvertex_grid_T ORCA025_coordinates_mask.nc |
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31 | ncrename -d ni,x_grid_T ORCA025_coordinates_mask.nc |
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32 | ncrename -d nj,y_grid_T ORCA025_coordinates_mask.nc |
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33 | |
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34 | #ncks -4 -O -h ORCA025_coordinates_mask.nc tmp_ORCA025_coordinates_mask.nc ; mv tmp_ORCA025_coordinates_mask.nc ORCA025_coordinates_mask.nc |
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35 | |
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36 | ncatted -h \ |
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37 | -a bounds,nav_lon_grid_T,c,c,"bounds_lon_grid_T" \ |
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38 | -a bounds,nav_lat_grid_T,c,c,"bounds_lat_grid_T" \ |
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39 | -a units,nav_lon_grid_T,c,c,"degrees_east" \ |
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40 | -a standard_name,nav_lon_grid_T,c,c,"Longitude" \ |
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41 | -a long_name,nav_lon_grid_T,c,c,"Longitude" \ |
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42 | -a units,nav_lat_grid_T,c,c,"degrees_north" \ |
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43 | -a standard_name,nav_lat_grid_T,c,c,"Latitude" \ |
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44 | -a long_name,nav_lat_grid_T,c,c,"Latitude" \ |
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45 | -a long_name,area,c,c,"Grid area" \ |
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46 | -a units,area,c,c,"m^2" \ |
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47 | -a online_operation,area,c,c,"once" \ |
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48 | -a coordinates,area,c,c,"nav_lat_grid_T nav_lon_grid_T" \ |
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49 | ORCA025_coordinates_mask.nc |
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50 | |
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51 | cat <<EOF > add_mask.nco |
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52 | mask_T = 1.0d - mask_T ; |
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53 | maskutil_T [y_grid_T,x_grid_T] = mask_T(:,:) ; |
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54 | maskutil_T ( : , 0) = 0.0d ; |
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55 | maskutil_T ( : , 1441) = 0.0d ; |
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56 | maskutil_T ( 1049, : ) = 0.0d ; |
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57 | maskutil_T ( 1048, 740:1441) = 0.0d ; |
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58 | EOF |
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59 | |
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60 | ncap2 -O -h -S add_mask.nco ORCA025_coordinates_mask.nc tmp_ORCA025_coordinates_mask.nc ; mv tmp_ORCA025_coordinates_mask.nc ORCA025_coordinates_mask.nc |
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61 | ncatted -h \ |
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62 | -a coordinates,mask_T,c,c,"nav_lat_grid_T nav_lon_grid_T" \ |
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63 | -a coordinates,maskutil_T,c,c,"nav_lat_grid_T nav_lon_grid_T" \ |
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64 | ORCA025_coordinates_mask.nc |
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65 | |
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66 | |
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67 | |
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68 | |
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