| 1 | #!/bin/ksh |
|---|
| 2 | #************************************************************** |
|---|
| 3 | # Author: Martial Mancip |
|---|
| 4 | # Contact: Martial.Mancip__at__ipsl.jussieu.fr |
|---|
| 5 | # $Revision:: 1525 $ Revision of last commit |
|---|
| 6 | # $Author:: cetlod $ Author of last commit |
|---|
| 7 | # $Date:: 2020-04-27 10:39:22 +0200 (Mon, 27 Apr 2020) $ Date of last commit |
|---|
| 8 | # IPSL (2006) |
|---|
| 9 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
|---|
| 10 | # |
|---|
| 11 | #************************************************************** |
|---|
| 12 | # ID of your genci project. Curie only : post-processing jobs need it to run properly |
|---|
| 13 | #-Q- curie export BRIDGE_MSUB_PROJECT=::default_project:: |
|---|
| 14 | #-Q- irene export BRIDGE_MSUB_PROJECT=::default_project:: |
|---|
| 15 | #-Q- irene-amd export BRIDGE_MSUB_PROJECT=::default_project:: |
|---|
| 16 | |
|---|
| 17 | #set -eu |
|---|
| 18 | #set -vx |
|---|
| 19 | |
|---|
| 20 | libIGCM=::modipsl::/libIGCM |
|---|
| 21 | |
|---|
| 22 | #D- Task type DO NOT CHANGE (computing, post-processing or checking) |
|---|
| 23 | TaskType=post-processing |
|---|
| 24 | |
|---|
| 25 | #D--------------------------------------------------------------------== |
|---|
| 26 | #D- -1. User modification place |
|---|
| 27 | #D--------------------------------------------------------------------== |
|---|
| 28 | |
|---|
| 29 | #D- Increased verbosity (1, 2, 3) |
|---|
| 30 | Verbosity=3 |
|---|
| 31 | |
|---|
| 32 | #D- Low level debug : to bypass lib test checks and stack construction |
|---|
| 33 | #D- Default=true |
|---|
| 34 | DEBUG_debug=false |
|---|
| 35 | |
|---|
| 36 | #D--------------------------------------------------------------------== |
|---|
| 37 | |
|---|
| 38 | echo "clean latest PackPeriod script :" |
|---|
| 39 | echo "Script used to clean a Pack Period from the IGCM_OUT directory !" |
|---|
| 40 | echo "This script will erase files !!! Be careful and read all informations !" |
|---|
| 41 | echo "----" |
|---|
| 42 | echo "It must be called in Experience directory (so-called SUBMIT_DIR)." |
|---|
| 43 | echo "----" |
|---|
| 44 | |
|---|
| 45 | #D--------------------------------------------------------------------== |
|---|
| 46 | |
|---|
| 47 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
|---|
| 48 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
|---|
| 49 | . ${libIGCM}/libIGCM_date/libIGCM_date.ksh |
|---|
| 50 | #------- |
|---|
| 51 | SUBMIT_DIR=$( pwd ) |
|---|
| 52 | . ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh |
|---|
| 53 | . ${libIGCM}/libIGCM_config/libIGCM_config.ksh |
|---|
| 54 | #------- |
|---|
| 55 | ( ${DEBUG_debug} ) && IGCM_debug_Check |
|---|
| 56 | ( ${DEBUG_debug} ) && IGCM_card_Check |
|---|
| 57 | ( ${DEBUG_debug} ) && IGCM_date_Check |
|---|
| 58 | |
|---|
| 59 | #================================== |
|---|
| 60 | # First of all |
|---|
| 61 | # |
|---|
| 62 | # Read libIGCM compatibility version in config.card |
|---|
| 63 | # Read UserChoices section |
|---|
| 64 | # Read Ensemble section |
|---|
| 65 | # Read Post section |
|---|
| 66 | # Define all netcdf output directories |
|---|
| 67 | #================================== |
|---|
| 68 | IGCM_config_CommonConfiguration ${SUBMIT_DIR}/config.card |
|---|
| 69 | |
|---|
| 70 | #================================== |
|---|
| 71 | # Define default value to keep compatibility with previous card: means before changes due to TGCC |
|---|
| 72 | if [ X${PackDefault} = Xtrue ] ; then |
|---|
| 73 | [ X${config_Post_PackFrequency} = X ] && config_Post_PackFrequency=${config_Post_RebuildFrequency} |
|---|
| 74 | else |
|---|
| 75 | config_Post_PackFrequency=NONE |
|---|
| 76 | fi |
|---|
| 77 | |
|---|
| 78 | #================================== |
|---|
| 79 | # Is the pack active |
|---|
| 80 | if ( [ ! X${config_Post_PackFrequency} = X${NULL_STR} ] && \ |
|---|
| 81 | [ ! X${config_Post_PackFrequency} = XNONE ] ) ; then |
|---|
| 82 | Pack=true |
|---|
| 83 | fi |
|---|
| 84 | |
|---|
| 85 | IGCM_sys_TestDirArchive ${R_SAVE} |
|---|
| 86 | [ $? != 0 ] && IGCM_debug_Exit "IGCM_sys_TestDirArchive" |
|---|
| 87 | |
|---|
| 88 | if [ ! -f ${SUBMIT_DIR}/run.card ]; then |
|---|
| 89 | echo "You seem NOT to have a run.card in this directory !!" |
|---|
| 90 | echo "This script will fail because it doesn't know what to do without run.card available." |
|---|
| 91 | exit 1 |
|---|
| 92 | fi |
|---|
| 93 | |
|---|
| 94 | #===================================# |
|---|
| 95 | # Read updated run.card # |
|---|
| 96 | #===================================# |
|---|
| 97 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration PeriodState |
|---|
| 98 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration PeriodDateBegin |
|---|
| 99 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration PeriodDateEnd |
|---|
| 100 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration CumulPeriod |
|---|
| 101 | if [ X${run_Configuration_CumulPeriod} == X ] ; then |
|---|
| 102 | ${run_Configuration_CumulPeriod} = 0 |
|---|
| 103 | fi |
|---|
| 104 | |
|---|
| 105 | PreviousPeriodDateBegin=$( IGCM_date_ConvertFormatToGregorian ${run_Configuration_PeriodDateBegin} ) |
|---|
| 106 | PreviousPeriodDateEnd=$( IGCM_date_ConvertFormatToGregorian ${run_Configuration_PeriodDateEnd} ) |
|---|
| 107 | |
|---|
| 108 | IGCM_date_GetYearMonth ${PreviousPeriodDateEnd} PreviousPeriodYear PreviousPeriodMonth |
|---|
| 109 | |
|---|
| 110 | if [ $# == 1 ] ; then |
|---|
| 111 | if [ ${#1} != 4 ] ; then |
|---|
| 112 | echo "You must give a year (SSAA) as argument." |
|---|
| 113 | exit 1 |
|---|
| 114 | fi |
|---|
| 115 | ReferenceYear=$1 |
|---|
| 116 | else |
|---|
| 117 | ReferenceYear=${PreviousPeriodYear} |
|---|
| 118 | fi |
|---|
| 119 | RemovedPeriods=0 |
|---|
| 120 | |
|---|
| 121 | # Colors |
|---|
| 122 | Red="\033[1;31m" |
|---|
| 123 | Green="\033[1;32m" |
|---|
| 124 | NoColor="\033[0m" |
|---|
| 125 | |
|---|
| 126 | while [ ${PreviousPeriodYear} -ge ${ReferenceYear} ] ; do |
|---|
| 127 | |
|---|
| 128 | PeriodDateEnd=${PreviousPeriodDateEnd} |
|---|
| 129 | PeriodDateBegin=${PreviousPeriodDateBegin} |
|---|
| 130 | PeriodYear=${PreviousPeriodYear} |
|---|
| 131 | PeriodMonth=${PreviousPeriodMonth} |
|---|
| 132 | |
|---|
| 133 | echo "Search files with ${PeriodDateEnd} in ${R_SAVE}" |
|---|
| 134 | unset ListFiles |
|---|
| 135 | set +A ListFiles -- $( IGCM_sys_RshArchive "find ${R_SAVE} -name \"*${PeriodDateEnd}*\" " ) |
|---|
| 136 | CountListFiles=${#ListFiles[@]} |
|---|
| 137 | |
|---|
| 138 | if [ X${Pack} = Xtrue ] ; then |
|---|
| 139 | echo "Search files with ${PeriodDateEnd} in ${R_BUFR}" |
|---|
| 140 | unset ListFilesBuf |
|---|
| 141 | set +A ListFilesBuf -- $( IGCM_sys_RshMaster "find ${R_BUFR} -name \"*${PeriodDateEnd}*\" " ) |
|---|
| 142 | CountListFilesBuf=${#ListFilesBuf[@]} |
|---|
| 143 | else |
|---|
| 144 | CountListFilesBuf=0 |
|---|
| 145 | fi |
|---|
| 146 | |
|---|
| 147 | # If exist, erase REBUILD DIR |
|---|
| 148 | CountRebuildDir=0 |
|---|
| 149 | if [ X${config_Post_RebuildFrequency} != X ] ; then |
|---|
| 150 | echo "Search directories with ${PeriodDateBegin} in REBUILD_DIR" |
|---|
| 151 | unset RebuildDir |
|---|
| 152 | set +A RebuildDir -- $( find ${REBUILD_DIR} -type d -name "*${PeriodDateBegin}*" ) |
|---|
| 153 | CountRebuildDir=${#RebuildDir[@]} |
|---|
| 154 | fi |
|---|
| 155 | |
|---|
| 156 | |
|---|
| 157 | if ( [ ${CountListFiles} -gt 0 ] || [ ${CountListFilesBuf} -gt 0 ] ) ; then |
|---|
| 158 | IGCM_debug_Print 1 "Number of files to be erased from ${R_SAVE} : ${CountListFiles}." |
|---|
| 159 | for file in ${ListFiles[@]} ; do |
|---|
| 160 | IGCM_debug_Print 2 -e "${Red} ${file}${NoColor}" |
|---|
| 161 | done |
|---|
| 162 | if [ X${Pack} = Xtrue ] ; then |
|---|
| 163 | IGCM_debug_Print 1 "Number of files to be erased from ${R_BUFR} : ${CountListFilesBuf}." |
|---|
| 164 | for file in ${ListFilesBuf[@]} ; do |
|---|
| 165 | IGCM_debug_Print 2 -e "${Red} ${file}${NoColor}" |
|---|
| 166 | done |
|---|
| 167 | fi |
|---|
| 168 | |
|---|
| 169 | echo -e "${Green}Do you REALLY want to erase all those files ?" |
|---|
| 170 | echo -n -e " Your answer (y/n) : ${NoColor}" |
|---|
| 171 | |
|---|
| 172 | read reponse |
|---|
| 173 | case ${reponse} in |
|---|
| 174 | oui|OUI|o|y|yes|YES) |
|---|
| 175 | echo "OK. It will be erased." |
|---|
| 176 | IGCM_sys_RshArchive "find ${R_SAVE} -name \"*${PeriodDateEnd}*\" -exec rm -f '{}' \;" |
|---|
| 177 | if [ X${Pack} = Xtrue ] ; then |
|---|
| 178 | IGCM_sys_RshMaster "find ${R_BUFR} -name \"*${PeriodDateEnd}*\" -exec rm -f '{}' \;" |
|---|
| 179 | fi |
|---|
| 180 | echo "done." |
|---|
| 181 | ;; |
|---|
| 182 | non|NON|n|no|NO) |
|---|
| 183 | echo "Nothing to do !" |
|---|
| 184 | ;; |
|---|
| 185 | esac |
|---|
| 186 | fi |
|---|
| 187 | |
|---|
| 188 | if [ ${CountRebuildDir} -gt 0 ] ; then |
|---|
| 189 | IGCM_debug_Print 1 "Number of REBUILD Dirs to be erased : ${CountRebuildDir}." |
|---|
| 190 | for Dir in ${RebuildDir[@]} ; do |
|---|
| 191 | IGCM_debug_Print 2 -e "${Red} ${Dir}${NoColor}" |
|---|
| 192 | done |
|---|
| 193 | |
|---|
| 194 | echo -e "${Green}Do you REALLY want to erase all those Directories ?" |
|---|
| 195 | echo -n -e " Your answer (y/n) : ${NoColor}" |
|---|
| 196 | |
|---|
| 197 | read reponse |
|---|
| 198 | case ${reponse} in |
|---|
| 199 | |
|---|
| 200 | oui|OUI|o|y|yes|YES) |
|---|
| 201 | echo "OK. It will be erased." |
|---|
| 202 | find ${REBUILD_DIR} -type d -name "*${PeriodDateBegin}*" -exec rm -Rf '{}' \; |
|---|
| 203 | echo "done." |
|---|
| 204 | ;; |
|---|
| 205 | non|NON|n|no|NO) |
|---|
| 206 | echo "Nothing to do !" |
|---|
| 207 | ;; |
|---|
| 208 | esac |
|---|
| 209 | fi |
|---|
| 210 | |
|---|
| 211 | (( RemovedPeriods = ${RemovedPeriods} + 1 )) |
|---|
| 212 | |
|---|
| 213 | # Get previous period begin and end dates |
|---|
| 214 | PreviousPeriodDateEnd=$( IGCM_date_AddDaysToGregorianDate ${PeriodDateBegin} -1 ) |
|---|
| 215 | Length=$( IGCM_date_DaysInPreviousPeriod ${PreviousPeriodDateEnd} ${config_UserChoices_PeriodLength} ) |
|---|
| 216 | echo "PreviousPeriodDateEnd, Length : $Length $PreviousPeriodDateEnd" |
|---|
| 217 | PreviousPeriodDateBegin=$( IGCM_date_AddDaysToGregorianDate ${PreviousPeriodDateEnd} -$(( Length - 1 )) ) |
|---|
| 218 | echo "PreviousPeriodDateBegin PreviousPeriodDateEnd :" $PreviousPeriodDateBegin $PreviousPeriodDateEnd |
|---|
| 219 | IGCM_date_GetYearMonth ${PreviousPeriodDateEnd} PreviousPeriodYear PreviousPeriodMonth |
|---|
| 220 | |
|---|
| 221 | done |
|---|
| 222 | |
|---|
| 223 | if [ ${RemovedPeriods} == 0 ] ; then |
|---|
| 224 | echo "Nothing done, exit" |
|---|
| 225 | exit 0 |
|---|
| 226 | fi |
|---|
| 227 | |
|---|
| 228 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card Configuration PeriodState |
|---|
| 229 | if ( [ ${run_Configuration_PeriodState} != "Running" ] && \ |
|---|
| 230 | [ ${run_Configuration_PeriodState} != "Continue" ] ) ; then |
|---|
| 231 | |
|---|
| 232 | (( NewCumulPeriod = ${run_Configuration_CumulPeriod} - ${RemovedPeriods} + 1 )) |
|---|
| 233 | |
|---|
| 234 | if [ ${NewCumulPeriod} -le 1 ] ; then |
|---|
| 235 | RemoveRunCard=true |
|---|
| 236 | else |
|---|
| 237 | RemoveRunCard=false |
|---|
| 238 | fi |
|---|
| 239 | |
|---|
| 240 | Suffix=$( printf '%06i' ${NewCumulPeriod} ) |
|---|
| 241 | |
|---|
| 242 | printf "${Green}Your run.card and Job_${config_UserChoices_JobName} will now be updated\n" |
|---|
| 243 | printf " - PeriodState = OnQueue ;\n" |
|---|
| 244 | printf " - PeriodDateBegin, PeriodDateEnd and CumulPeriod ;\n" |
|---|
| 245 | printf " %-10s %-10s %6i\n" \ |
|---|
| 246 | $( IGCM_date_HumanDigit ${PeriodDateBegin} ) \ |
|---|
| 247 | $( IGCM_date_HumanDigit ${PeriodDateEnd} ) \ |
|---|
| 248 | ${NewCumulPeriod} |
|---|
| 249 | printf " - ScriptOutput = %s" \ |
|---|
| 250 | "Script_Output_${config_UserChoices_JobName}.${Suffix}" |
|---|
| 251 | printf " Are you OK ? (y/n) ${NoColor}" |
|---|
| 252 | |
|---|
| 253 | read reponse |
|---|
| 254 | case ${reponse} in |
|---|
| 255 | oui|OUI|o|y|yes|YES) |
|---|
| 256 | if ( ${RemoveRunCard} ) ; then |
|---|
| 257 | echo "CumulPeriod=1 so we erase run.card to start properly." |
|---|
| 258 | IGCM_sys_Rm ${SUBMIT_DIR}/run.card |
|---|
| 259 | else |
|---|
| 260 | # Update run.card |
|---|
| 261 | cp ${SUBMIT_DIR}/run.card ${SUBMIT_DIR}/run.card.old |
|---|
| 262 | IGCM_card_WriteOption ${SUBMIT_DIR}/run.card Configuration PeriodState "OnQueue" |
|---|
| 263 | IGCM_card_WriteOption ${SUBMIT_DIR}/run.card Configuration CumulPeriod ${NewCumulPeriod} |
|---|
| 264 | IGCM_card_WriteOption ${SUBMIT_DIR}/run.card Configuration PeriodDateBegin \ |
|---|
| 265 | $( IGCM_date_HumanDigit ${PeriodDateBegin} ) |
|---|
| 266 | IGCM_card_WriteOption ${SUBMIT_DIR}/run.card Configuration PeriodDateEnd \ |
|---|
| 267 | $( IGCM_date_HumanDigit ${PeriodDateEnd} ) |
|---|
| 268 | # Update job |
|---|
| 269 | cp Job_${config_UserChoices_JobName} Job_${config_UserChoices_JobName}.old |
|---|
| 270 | sed -e "s/\(#.*Script_Output_${config_UserChoices_JobName}\.\)\([0-9]*\)\(.*\)/\1${Suffix}\3/" \ |
|---|
| 271 | Job_${config_UserChoices_JobName} > Job_${config_UserChoices_JobName}.tmp |
|---|
| 272 | mv Job_${config_UserChoices_JobName}.tmp Job_${config_UserChoices_JobName} |
|---|
| 273 | fi |
|---|
| 274 | echo "OK. Now you can submit the Job : ${SUBMIT_DIR}/Job_${config_UserChoices_JobName}." |
|---|
| 275 | ;; |
|---|
| 276 | non|NON|n|no|NO) |
|---|
| 277 | echo "Nothing to do !" |
|---|
| 278 | ;; |
|---|
| 279 | esac |
|---|
| 280 | |
|---|
| 281 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/run.card PostProcessing TimeSeriesCompleted |
|---|
| 282 | if [ ! X${run_PostProcessing_TimeSeriesCompleted} = X ] ; then |
|---|
| 283 | |
|---|
| 284 | printf "${Green}TimeSeriesCompleted in run.card : ${run_PostProcessing_TimeSeriesCompleted}. Do we need to initialize it? (y/n) ${NoColor}" |
|---|
| 285 | |
|---|
| 286 | read reponse |
|---|
| 287 | case ${reponse} in |
|---|
| 288 | oui|OUI|o|y|yes|YES) |
|---|
| 289 | #Update run.card |
|---|
| 290 | cp ${SUBMIT_DIR}/run.card ${SUBMIT_DIR}/run.card.old |
|---|
| 291 | IGCM_card_WriteOption ${SUBMIT_DIR}/run.card PostProcessing TimeSeriesCompleted "" |
|---|
| 292 | ;; |
|---|
| 293 | *) |
|---|
| 294 | echo "Nothing to do !" |
|---|
| 295 | ;; |
|---|
| 296 | esac |
|---|
| 297 | fi |
|---|
| 298 | |
|---|
| 299 | else |
|---|
| 300 | echo "You can submit the Job : ${SUBMIT_DIR}/Job_${config_UserChoices_JobName}." |
|---|
| 301 | fi |
|---|
| 302 | |
|---|
| 303 | exit 0 |
|---|
