source: CONFIG_DEVT/IPSLCM6.5_work_ENSEMBLES/RUN_DIR/Job

Last change on this file was 5869, checked in by ymipsl, 3 years ago

Create RUN_DIR ensemble

File size: 2.1 KB
Line 
1#!/bin/bash
2######################
3## IRENE-AMD   TGCC/CEA ##
4######################
5#MSUB -r IPSLCM6.5_ENSEMBLES        # Job Name
6#MSUB -o Script_Output_IPSLCM6.5_ENSEMBLES    # standard output
7#MSUB -e Script_Output_IPSLCM6.5_ENSEMBLES    # error output
8#MSUB -eo
9#MSUB -n 369  # Number of MPI tasks (SPMD case) or cores (MPMD case)
10#MSUB -x                    # exclusive node. To specify only for MPMD together with the one below
11#MSUB -T 1800              # Wall clock limit (seconds)
12#MSUB -Q test
13#MSUB -A gen0826
14#MSUB -q rome
15#MSUB -X
16#MSUB -m store,work,scratch
17
18cd ${BRIDGE_MSUB_PWD}
19
20
21module purge
22module load intel/19.0.5.281
23module load feature/openmpi/net/ib/ucx-verbs
24module load flavor/openmpi/vanilla mpi/openmpi/4.0.5
25module load flavor/hdf5/parallel
26module load netcdf-fortran/4.4.4
27module load hdf5/1.8.20
28module load feature/bridge/heterogenous_mpmd
29module load nco/4.9.1
30module load cdo/1.9.5
31module load c++/gnu/7.3.0
32module load c/gnu/7.3.0
33module load arm-forge/20.2.1
34
35
36pool_number=5
37pool_size=2
38
39whole_ensemble_size=$((${pool_number}*${pool_size}))
40
41rm -f xios.x ; cp ../bin/xios_server_prod.exe xios.x
42rm -f lmdz.x ; cp ../bin/gcm_96x95x59_prod.e lmdz.x
43rm -f opa.xx ; cp ../bin/opa_prod.exe opa.xx
44rm -rf XIOS
45mkdir XIOS
46
47for (( pool_rank=0 ; pool_rank < $(($pool_number)) ; pool_rank++ ))
48do
49  ./create_runfile.sh $pool_size $pool_rank
50
51  for (( pool_member_rank=0; pool_member_rank<$(($pool_size+1)); pool_member_rank++ ))
52  do
53
54    whole_ensemble_rank=$(($pool_size*$pool_rank+$pool_member_rank))
55    if (( pool_member_rank < $pool_size ))
56    then
57      rm -rf MEMBER_$whole_ensemble_rank
58      mkdir MEMBER_$whole_ensemble_rank
59      cd MEMBER_$whole_ensemble_rank
60    else
61      cd XIOS
62    fi
63   
64    ln -f -s ../ENSEMBLE_TEMPLATE/* .
65    cp ../oasis_namcouple_body ../oasis_namcouple_epilog ../oasis_namcouple_header .
66    ../create_ensemble_def $whole_ensemble_size $pool_size $pool_rank $pool_member_rank
67    ../create_oasis_namecoupl.sh $pool_size $pool_rank
68    ../create_oasis_restart.sh $pool_size $pool_rank 
69    ../create_iodef_xml.sh $pool_size 
70    cd ..
71  done 
72  #export DDT=TRUE
73  /usr/bin/time ccc_mprun -E-K1 -f ./run_file
74done
75
76
77exit
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