1 | #!/bin/bash |
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2 | #set -vx |
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3 | # Default options |
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4 | # |
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5 | # |
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6 | # |
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7 | #### 1 Set up the compiling options |
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8 | #### Define some directories |
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9 | submitdir=$( pwd ) |
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10 | modipsl=$submitdir/../.. |
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11 | echo modipsl=$modipsl |
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12 | echo submitdir=$submitdir |
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13 | arch_path=$submitdir/ARCH |
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14 | export ROOT=$modipsl/modeles/DYNAMICO |
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15 | |
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16 | #### Set default options |
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17 | # Optimization mode |
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18 | # optmode=prod/dev/debug |
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19 | optmode=prod |
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20 | # Resolution if compiling LMDZ in regular mode without DYNAMICO |
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21 | # Use for example following "./compile_icolmdzor.sh -regular_lonlat 144x142x79" |
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22 | regular_latlon=no |
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23 | # fcm_arch |
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24 | fcm_arch=default |
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25 | # Default values to be overritten |
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26 | parallel=mpi |
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27 | export fcm_arch parallel xios |
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28 | full_flag="" |
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29 | |
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30 | #### Read arguments |
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31 | # Loop over all arguments to modify default set up |
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32 | while (($# > 0)) ; do |
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33 | case $1 in |
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34 | "-h") cat <<fin |
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35 | |
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36 | ######################################################################## |
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37 | # Usage of the script compile_icolmdzor.sh |
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38 | # |
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39 | ######################################################################## |
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40 | |
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41 | ./compile_config [Options] |
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42 | |
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43 | Options: -full, -regular_latlon |
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44 | |
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45 | Example 1: Default compilation of DYNAMICO-LMDZ-ORCHIDEE with XIOS and IOIPSL |
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46 | ./compile_icolmdzor.sh |
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47 | |
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48 | Example 2: Default compilation with full recompilation of all components |
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49 | ./compile_icolmdzor.sh -full |
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50 | |
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51 | Example 3: Compilation of LMDZ in regular lat-lon for dimension 144x142x79. |
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52 | The dimension can be changed to any other 3d dimension. DYNAMICO is also compiled as default. |
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53 | ./compile_icolmdzor.sh -regular_latlon 144x142x79 |
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54 | |
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55 | fin |
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56 | exit;; |
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57 | |
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58 | "-parallel") |
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59 | parallel=$2 ; shift ; shift ;; |
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60 | |
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61 | "-arch") |
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62 | fcm_arch="$2" ; shift ; shift ;; |
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63 | |
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64 | "-xios") |
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65 | xios="$2" ; shift ; shift ;; |
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66 | |
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67 | "-optmode") |
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68 | optmode=$2 ; shift ; shift ;; |
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69 | |
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70 | "-regular_latlon") |
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71 | regular_latlon=yes ; |
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72 | resol_atm_3d=$2 ; shift ; shift ;; |
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73 | |
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74 | "-full") |
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75 | full_flag="-full"; shift ;; |
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76 | |
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77 | *) |
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78 | echo "unknown option "$2" , exiting..." |
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79 | exit |
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80 | esac |
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81 | done |
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82 | |
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83 | |
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84 | ### Read host dependent default values |
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85 | ### These variables will not be changed if they were set as argument |
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86 | ###./host.sh $host |
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87 | # Later : Following lines should be set in host.sh file |
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88 | # begin host.sh |
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89 | if [ $fcm_arch == default ] ; then |
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90 | # Find out current host and source specific paths and commands for the host |
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91 | case $( hostname -s ) in |
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92 | ada*) |
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93 | fcm_arch=X64_ADA;; |
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94 | irene*) |
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95 | fcm_arch=X64_IRENE; |
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96 | source /ccc/cont003/home/igcmg/igcmg/MachineEnvironment/irene/env_irene ;; |
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97 | asterix*|obelix*) |
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98 | fcm_arch=ifort_LSCE;; |
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99 | *) |
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100 | echo Current host is not known. You must use option -fcm_arch to specify which architecuture files to use. |
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101 | echo Exit now. |
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102 | exit |
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103 | esac |
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104 | fi |
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105 | |
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106 | ##### End host.sh |
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107 | echo |
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108 | echo "Following arguments are set in current compiling:" |
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109 | echo " optmode = $optmode, parallel = $parallel, fcm_arch = $fcm_arch, full_flag=$full regular_latlon=$regular_latlon" |
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110 | |
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111 | #### 2 Do the compilation |
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112 | ## 2.1 Compile ioipsl |
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113 | cd $modipsl/modeles/IOIPSL |
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114 | echo; echo "NOW COMPILE IOIPSL" |
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115 | echo ./makeioipsl_fcm -$optmode -parallel -arch ${fcm_arch} -arch_path $arch_path -j 8 $full_flag |
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116 | ./makeioipsl_fcm -$optmode -parallel -arch ${fcm_arch} -arch_path $arch_path -j 8 $full_flag |
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117 | # Test if compiling succeded |
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118 | if [[ $? != 0 ]] ; then |
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119 | echo "THERE IS A PROBLEM IN IOIPSL COMPILATION - STOP" |
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120 | exit |
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121 | fi |
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122 | |
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123 | ## 2.2 Compile xios |
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124 | cd $modipsl/modeles/XIOS |
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125 | echo; echo "NOW COMPILE XIOS" |
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126 | echo ./make_xios --$optmode --arch $fcm_arch --arch_path $arch_path --job 8 $full_flag |
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127 | ./make_xios --$optmode --arch $fcm_arch --arch_path $arch_path --job 8 $full_flag |
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128 | # Test if compiling succeded |
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129 | if [[ $? != 0 ]] ; then |
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130 | echo "THERE IS A PROBLEM IN XIOS COMPILATION - STOP" |
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131 | exit |
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132 | fi |
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133 | |
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134 | ## 2.3 Compile orchidee |
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135 | cd $modipsl/modeles/ORCHIDEE |
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136 | echo; echo "NOW COMPILE ORCHIDEE" |
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137 | echo ./makeorchidee_fcm -j 8 -parallel $parallel -$optmode -arch ${fcm_arch} $full_flag -driver |
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138 | ./makeorchidee_fcm -j 8 -parallel $parallel -$optmode -arch ${fcm_arch} $full_flag -driver |
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139 | # Test if compiling finished |
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140 | if [[ $? != 0 ]] ; then |
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141 | echo "THERE IS A PROBLEM IN ORCHIDEE COMPILATION - STOP" |
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142 | exit |
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143 | fi |
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144 | |
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145 | ## 2.4 Compile lmdz |
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146 | cd $modipsl/modeles/LMDZ |
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147 | # Compile LMDZ as library to couple to DYNAMICO |
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148 | echo; echo "NOW COMPILE LMDZ FOR COUPLING TO DYNAMICO" |
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149 | echo ./makelmdz_fcm -p lmd -rrtm true -$optmode -mem -parallel $parallel -libphy -v orchidee2.1 -io xios -arch $fcm_arch -j 8 $full_flag |
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150 | ./makelmdz_fcm -p lmd -rrtm true -$optmode -mem -parallel $parallel -libphy -v orchidee2.1 -io xios -arch $fcm_arch -j 8 $full_flag |
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151 | # Test if compiling finished |
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152 | if [[ $? != 0 ]] ; then |
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153 | echo "THERE IS A PROBLEM IN LMDZ PHYSICS COMPILATION - STOP" |
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154 | exit |
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155 | fi |
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156 | |
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157 | |
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158 | ## 2.5 Compile DYNAMICO |
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159 | echo; echo "NOW COMPILE DYNAMICO " |
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160 | cd $modipsl/modeles/DYNAMICO |
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161 | echo ./make_icosa -$optmode -parallel $parallel -external_ioipsl -with_xios -arch $fcm_arch -arch_path $arch_path -job 8 $full_flag |
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162 | ./make_icosa -$optmode -parallel $parallel -external_ioipsl -with_xios -arch $fcm_arch -arch_path $arch_path -job 8 $full_flag |
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163 | # Test if compiling finished |
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164 | if [[ $? != 0 ]] ; then |
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165 | echo "THERE IS A PROBLEM IN DYNAMICO COMPILATION - STOP" |
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166 | exit |
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167 | fi |
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168 | |
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169 | ## 2.6 Compile interface ICOSA_LMDZ |
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170 | echo; echo "NOW COMPILE ICOSA_LMDZ " |
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171 | cd $modipsl/modeles/ICOSA_LMDZ |
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172 | echo ./make_icosa_lmdz -nodeps -p lmd -$optmode -parallel $parallel -with_orchidee -arch ${fcm_arch} -arch_path ${arch_path} -job 8 $full_flag |
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173 | |
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174 | ./make_icosa_lmdz -nodeps -p lmd -$optmode -parallel $parallel -with_orchidee -arch ${fcm_arch} -arch_path ${arch_path} -job 8 $full_flag |
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175 | # Test if compiling finished |
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176 | if [[ $? != 0 ]] ; then |
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177 | echo "THERE IS A PROBLEM IN ICOSA_LMDZ COMPILATION - STOP" |
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178 | exit |
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179 | fi |
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180 | |
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181 | |
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182 | ## 2.7 Compile LMDZ for regular latlon configuration |
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183 | if [ $regular_latlon = yes ] ; then |
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184 | |
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185 | cd $modipsl/modeles/LMDZ |
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186 | # Compile LMDZ regular lat-lon exectuable |
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187 | echo; echo "NOW COMPILE LMDZ REGULAR LAT-LON MODE. Resolution = ${resol_atm_3d}" |
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188 | echo ./makelmdz_fcm -d ${resol_atm_3d} -p lmd -rrtm true -$optmode -mem -parallel $parallel -io xios -v orchidee2.1 -arch $fcm_arch -j 8 $full_flag gcm |
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189 | ./makelmdz_fcm -d ${resol_atm_3d} -p lmd -rrtm true -$optmode -mem -parallel $parallel -io xios -v orchidee2.1 -arch $fcm_arch -j 8 $full_flag gcm |
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190 | # Test if compiling finished |
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191 | if [[ $? != 0 ]] ; then |
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192 | echo "THERE IS A PROBLEM IN LMDZ REGULAR LATLON COMPILATION - STOP" |
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193 | exit |
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194 | fi |
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195 | |
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196 | # Compile ce0l initialization program for LMDZ regular lat-lon exectuable |
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197 | echo; echo "NOW COMPILE CE0L OF LMDZ. Resolution = ${resol_atm_3d}" |
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198 | echo ./makelmdz_fcm -d ${resol_atm_3d} -p lmd -rrtm true -$optmode -mem -parallel $parallel -io xios -v orchidee2.1 -arch $fcm_arch -j 8 $full_flag ce0l |
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199 | ./makelmdz_fcm -d ${resol_atm_3d} -p lmd -rrtm true -$optmode -mem -parallel $parallel -io xios -v orchidee2.1 -arch $fcm_arch -j 8 $full_flag ce0l |
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200 | # Test if compiling finished |
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201 | if [[ $? != 0 ]] ; then |
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202 | echo "THERE IS A PROBLEM IN CE0L (LMDZ) REGULAR LATLON COMPILATION - STOP" |
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203 | exit |
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204 | fi |
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205 | |
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206 | # Find executable suffix |
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207 | if [ $parallel == seq ] || [ $parallel == none ] ; then |
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208 | suffix=_${resol_atm_3d}_phylmd_seq_orch |
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209 | else |
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210 | suffix=_${resol_atm_3d}_phylmd_para_mem_orch |
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211 | fi |
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212 | echo suffix = $suffix |
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213 | |
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214 | # Move executables to modipsl/bin folder |
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215 | echo "Move gcm.e and ce0l executable to modipsl/bin" |
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216 | if [ $modipsl/modeles/LMDZ/bin/gcm${suffix}.e ] ; then mv $modipsl/modeles/LMDZ/bin/gcm${suffix}.e $modipsl/bin/gcm_${resol_atm_3d}.e ; fi |
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217 | if [ $modipsl/modeles/LMDZ/bin/ce0l${suffix}.e ] ; then mv $modipsl/modeles/LMDZ/bin/ce0l${suffix}.e $modipsl/bin/ce0l_${resol_atm_3d}.e ; fi |
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218 | |
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219 | # Write .resol file |
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220 | cd $submitdir |
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221 | resol2D=$( echo ${resol_atm_3d} | awk '-Fx' '{print $1}' )$( echo ${resol_atm_3d} | awk '-Fx' '{print $2}' ) |
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222 | echo "noORCAxLMD$resol2D" >.resol |
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223 | echo "RESOL_ATM_3D=${resol_atm_3d}" >>.resol |
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224 | fi |
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225 | |
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226 | |
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227 | ## Move executables to modipsl/bin folder |
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228 | echo "Move executables to modipsl/bin" |
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229 | if [ $modipsl/modeles/ICOSA_LMDZ/bin/icosa_lmdz.exe ] ; then mv $modipsl/modeles/ICOSA_LMDZ/bin/icosa_lmdz.exe $modipsl/bin/. ; fi |
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230 | if [ $modipsl/modeles/XIOS/bin/xios_server.exe ] ; then mv $modipsl/modeles/XIOS/bin/xios_server.exe $modipsl/bin/. ; fi |
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231 | |
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232 | |
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233 | echo |
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234 | echo "ALL COMPILING FINISHED" |
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235 | echo |
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236 | |
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237 | exit |
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238 | |
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239 | |
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