1 | <?xml version="1.0"?> |
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2 | <!-- $id$ --> |
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3 | |
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4 | <!-- |
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5 | ============================================================================================================ |
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6 | = definition of all existing variables = |
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7 | = DO NOT CHANGE = |
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8 | ============================================================================================================ |
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9 | --> |
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10 | <field_definition level="1" prec="4" operation="average" enabled=".TRUE." default_value="1.e20" > <!-- time step automaticaly defined --> |
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11 | |
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12 | <!-- |
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13 | ============================================================================================================ |
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14 | Biogeochemistry model variables |
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15 | ============================================================================================================ |
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16 | --> |
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17 | |
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18 | <!-- ptrc on T grid --> |
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19 | |
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20 | <field_group id="ptrc_T" grid_ref="grid_T_3D"> |
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21 | <field id="DIC" long_name="Dissolved inorganic Concentration" unit="mmol/m3" /> |
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22 | <field id="DIC_E3T" long_name="DIC * E3T" unit="mmol/m2" > DIC * e3t </field > |
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23 | <field id="Alkalini" long_name="Total Alkalinity Concentration" unit="mmol/m3" /> |
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24 | <field id="Alkalini_E3T" long_name="Alkalini * E3T" unit="mmol/m2" > Alkalini * e3t </field > |
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25 | <field id="O2" long_name="Oxygen Concentration" unit="mmol/m3" /> |
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26 | <field id="O2_E3T" long_name="O2 * E3T" unit="mmol/m2" > O2 * e3t </field > |
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27 | <field id="CaCO3" long_name="Calcite Concentration" unit="mmol/m3" /> |
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28 | <field id="CaCO3_E3T" long_name="CaCO3 * E3T" unit="mmol/m2" > CaCO3 * e3t </field > |
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29 | <field id="PO4" long_name="Phosphate Concentration" unit="mmol/m3" /> |
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30 | <field id="PO4_E3T" long_name="PO4 * E3T" unit="mmol/m2" > PO4 * e3t </field > |
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31 | <field id="POC" long_name="Small organic carbon Concentration" unit="mmol/m3" /> |
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32 | <field id="POC_E3T" long_name="POC * E3T" unit="mmol/m2" > POC * e3t </field > |
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33 | <field id="Si" long_name="Silicate Concentration" unit="mmol/m3" /> |
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34 | <field id="Si_E3T" long_name="Si * E3T" unit="mmol/m2" > Si * e3t </field > |
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35 | <field id="PHY" long_name="(Nano)Phytoplankton Concentration" unit="mmol/m3" /> |
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36 | <field id="PHY_E3T" long_name="PHY * E3T" unit="mmol/m2" > PHY * e3t </field > |
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37 | <field id="ZOO" long_name="(Micro)Zooplankton Concentration" unit="mmol/m3" /> |
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38 | <field id="ZOO_E3T" long_name="ZOO2 * E3T" unit="mmol/m2" > ZOO * e3t </field > |
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39 | <field id="DOC" long_name="Dissolved organic Concentration" unit="mmol/m3" /> |
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40 | <field id="DOC_E3T" long_name="DOC * E3T" unit="mmol/m2" > DOC * e3t </field > |
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41 | <field id="PHY2" long_name="Diatoms Concentration" unit="mmol/m3" /> |
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42 | <field id="PHY2_E3T" long_name="PHY2 * E3T" unit="mmol/m2" > PHY2 * e3t </field > |
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43 | <field id="ZOO2" long_name="Mesozooplankton Concentration" unit="mmol/m3" /> |
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44 | <field id="ZOO2_E3T" long_name="ZOO2 * E3T" unit="mmol/m2" > ZOO2 * e3t </field > |
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45 | <field id="DSi" long_name="Diatoms Silicate Concentration" unit="mmol/m3" /> |
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46 | <field id="DSi_E3T" long_name="Dsi * E3T" unit="mmol/m2" > DSi * e3t </field > |
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47 | <field id="Fer" long_name="Dissolved Iron Concentration" unit="mmol/m3" /> |
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48 | <field id="Fer_E3T" long_name="Fer * E3T" unit="mmol/m2" > Fer * e3t </field > |
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49 | <field id="BFe" long_name="Big iron particles Concentration" unit="mmol/m3" /> |
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50 | <field id="BFe_E3T" long_name="BFe * E3T" unit="mmol/m2" > BFe * e3t </field > |
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51 | <field id="GOC" long_name="Big organic carbon Concentration" unit="mmol/m3" /> |
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52 | <field id="GOC_E3T" long_name="GOC * E3T" unit="mmol/m2" > GOC * e3t </field > |
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53 | <field id="SFe" long_name="Small iron particles Concentration" unit="mmol/m3" /> |
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54 | <field id="SFe_E3T" long_name="SFe * E3T" unit="mmol/m2" > SFe * e3t </field > |
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55 | <field id="DFe" long_name="Diatoms iron Concentration" unit="mmol/m3" /> |
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56 | <field id="DFe_E3T" long_name="DFe * E3T" unit="mmol/m2" > DFe * e3t </field > |
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57 | <field id="GSi" long_name="Sinking biogenic Silicate Concentration" unit="mmol/m3" /> |
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58 | <field id="GSi_E3T" long_name="GSi * E3T" unit="mmol/m2" > GSi * e3t </field > |
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59 | <field id="NFe" long_name="Nano iron Concentration" unit="mmol/m3" /> |
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60 | <field id="NFe_E3T" long_name="NFe * E3T" unit="mmol/m2" > NFe * e3t </field > |
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61 | <field id="NCHL" long_name="Nano chlorophyl Concentration" unit="mg/m3" /> |
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62 | <field id="NCHL_E3T" long_name="NCHL * E3T" unit="mmol/m2" > NCHL * e3t </field > |
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63 | <field id="DCHL" long_name="Diatoms chlorophyl Concentration" unit="mg/m3" /> |
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64 | <field id="DCHL_E3T" long_name="DCHL * E3T" unit="mmol/m2" > DCHL * e3t </field > |
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65 | <field id="NO3" long_name="Nitrate Concentration" unit="mmol/m3" /> |
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66 | <field id="NO3_E3T" long_name="NO3 * E3T" unit="mmol/m2" > NO3 * e3t </field > |
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67 | <field id="NH4" long_name="Ammonium Concentration" unit="mmol/m3" /> |
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68 | <field id="NH4_E3T" long_name="NH4 * E3T" unit="mmol/m2" > NH4 * e3t </field > |
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69 | |
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70 | <!-- PISCES with Kriest parametisation : variables available with key_kriest --> |
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71 | <field id="Num" long_name="Number of organic particles" unit="1" /> |
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72 | <field id="Num_E3T" long_name="Num * E3T" unit="m" > Num * e3t </field > |
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73 | |
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74 | <!-- PISCES light : variables available with key_pisces_reduced --> |
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75 | <field id="DET" long_name="Detritus" unit="mmol-N/m3" /> |
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76 | <field id="DET_E3T" long_name="DET * E3T" unit="mmol-N/m2" > DET * e3t </field > |
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77 | <field id="DOM" long_name="Dissolved Organic Matter" unit="mmol-N/m3" /> |
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78 | <field id="DOM_E3T" long_name="DOM * E3T" unit="mmol-N/m2" > DOM * e3t </field > |
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79 | |
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80 | <!-- CFC11 : variables available with key_cfc --> |
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81 | <field id="CFC11" long_name="CFC-11 Concentration" unit="umol/m3" /> |
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82 | <field id="CFC11_E3T" long_name="CFC11 * E3T" unit="umol/m2" > CFC11 * e3t </field > |
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83 | <!-- Bomb C14 : variables available with key_c14b --> |
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84 | <field id="C14B" long_name="Bomb C14 Concentration" unit="1" /> |
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85 | <field id="C14B_E3T" long_name="C14B * E3T" unit="m" > C14B * e3t </field > |
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86 | </field_group> |
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87 | |
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88 | <!-- PISCES additional diagnostics on T grid --> |
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89 | |
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90 | <field_group id="diad_T" grid_ref="grid_T_2D"> |
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91 | <field id="PH" long_name="PH" unit="1" grid_ref="grid_T_3D" /> |
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92 | <field id="CO3" long_name="Bicarbonates" unit="mol/m3" grid_ref="grid_T_3D" /> |
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93 | <field id="CO3sat" long_name="CO3 saturation" unit="mol/m3" grid_ref="grid_T_3D" /> |
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94 | <field id="PAR" long_name="Photosynthetically Available Radiation" unit="W/m2" grid_ref="grid_T_3D" /> |
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95 | <field id="PARDM" long_name="Daily mean PAR" unit="W/m2" grid_ref="grid_T_3D" /> |
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96 | <field id="PPPHY" long_name="Primary production of nanophyto" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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97 | <field id="PPPHY2" long_name="Primary production of diatoms" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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98 | <field id="PPNEWN" long_name="New Primary production of nanophyto" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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99 | <field id="PPNEWD" long_name="New Primary production of diatoms" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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100 | <field id="PBSi" long_name="Primary production of Si diatoms" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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101 | <field id="PFeN" long_name="Primary production of nano iron" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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102 | <field id="PFeD" long_name="Primary production of diatoms iron" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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103 | <field id="xfracal" long_name="Calcifying fraction" unit="1" grid_ref="grid_T_3D" /> |
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104 | <field id="PCAL" long_name="Calcite production" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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105 | <field id="DCAL" long_name="Calcite dissolution" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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106 | <field id="GRAZ1" long_name="Grazing by microzooplankton" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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107 | <field id="GRAZ2" long_name="Grazing by mesozooplankton" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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108 | <field id="REMIN" long_name="Oxic remineralization of OM" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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109 | <field id="DENIT" long_name="Anoxic remineralization of OM" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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110 | <field id="Nfix" long_name="Nitrogen fixation" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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111 | <field id="Mumax" long_name="Maximum growth rate" unit="s-1" grid_ref="grid_T_3D" /> |
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112 | <field id="MuN" long_name="Realized growth rate for nanophyto" unit="s-1" grid_ref="grid_T_3D" /> |
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113 | <field id="MuD" long_name="Realized growth rate for diatomes" unit="s-1" grid_ref="grid_T_3D" /> |
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114 | <field id="LNnut" long_name="Nutrient limitation term in Nanophyto" unit="" grid_ref="grid_T_3D" /> |
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115 | <field id="LDnut" long_name="Nutrient limitation term in Diatoms" unit="" grid_ref="grid_T_3D" /> |
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116 | <field id="LNFe" long_name="Iron limitation term in Nanophyto" unit="" grid_ref="grid_T_3D" /> |
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117 | <field id="LDFe" long_name="Iron limitation term in Diatoms" unit="" grid_ref="grid_T_3D" /> |
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118 | <field id="LNlight" long_name="Light limitation term in Nanophyto" unit="" grid_ref="grid_T_3D" /> |
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119 | <field id="LDlight" long_name="Light limitation term in Diatoms" unit="" grid_ref="grid_T_3D" /> |
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120 | <field id="Fe2" long_name="Iron II concentration" unit="nmol/m3" grid_ref="grid_T_3D" /> |
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121 | <field id="Fe3" long_name="Iron III concentration" unit="nmol/m3" grid_ref="grid_T_3D" /> |
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122 | <field id="FeL1" long_name="Complexed Iron concentration with L1" unit="nmol/m3" grid_ref="grid_T_3D" /> |
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123 | <field id="FeL2" long_name="Complexed Iron concentration with L2" unit="nmol/m3" grid_ref="grid_T_3D" /> |
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124 | <field id="FeP" long_name="Precipitated Iron III" unit="nmol/m3" grid_ref="grid_T_3D" /> |
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125 | <field id="TL1" long_name="Total L1 concentration" unit="nmol/m3" grid_ref="grid_T_3D" /> |
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126 | <field id="TL2" long_name="Total L2 concentration" unit="nmol/m3" grid_ref="grid_T_3D" /> |
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127 | <field id="pdust" long_name="dust concentration" unit="g/m3" /> |
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128 | <field id="Totlig" long_name="Total ligand concentation" unit="nmol/m3" grid_ref="grid_T_3D" /> |
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129 | <field id="Biron" long_name="Bioavailable iron" unit="nmol/m3" grid_ref="grid_T_3D" /> |
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130 | <field id="Sdenit" long_name="Nitrate reduction in the sediments" unit="molN/m2/s" /> |
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131 | <field id="SedCal" long_name="Calcite burial in the sediments" unit="molC/m2/s" /> |
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132 | <field id="SedSi" long_name="Silicon burial in the sediments" unit="molSi/m2/s" /> |
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133 | <field id="SedC" long_name="Organic C burial in the sediments" unit="molC/m2/s" /> |
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134 | <field id="Ironice" long_name="Iron input/uptake due to sea ice" unit="mol/m2/s" /> |
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135 | <field id="HYDR" long_name="Iron input from hydrothemal vents" unit="mol/m2/s" grid_ref="grid_T_3D" /> |
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136 | <field id="EPC100" long_name="Export of carbon particles at 100 m" unit="mol/m2/s" /> |
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137 | <field id="EPFE100" long_name="Export of biogenic iron at 100 m" unit="mol/m2/s" /> |
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138 | <field id="EPSI100" long_name="Export of Silicate at 100 m" unit="mol/m2/s" /> |
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139 | <field id="EPCAL100" long_name="Export of Calcite at 100 m" unit="mol/m2/s" /> |
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140 | <field id="EXPC" long_name="Export of carbon" unit="mol/m2/s" grid_ref="grid_T_3D" /> |
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141 | <field id="EXPFE" long_name="Export of biogenic iron" unit="mol/m2/s" grid_ref="grid_T_3D" /> |
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142 | <field id="EXPSI" long_name="Export of Silicate" unit="mol/m2/s" grid_ref="grid_T_3D" /> |
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143 | <field id="EXPCAL" long_name="Export of Calcite" unit="mol/m2/s" grid_ref="grid_T_3D" /> |
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144 | <field id="Cflx" long_name="DIC flux" unit="mol/m2/s" /> |
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145 | <field id="Oflx" long_name="Oxygen flux" unit="mol/m2/s" /> |
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146 | <field id="Kg" long_name="Gas transfer" unit="mol/m2/s/uatm" /> |
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147 | <field id="Dpco2" long_name="Delta CO2" unit="uatm" /> |
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148 | <field id="Dpo2" long_name="Delta O2" unit="uatm" /> |
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149 | <field id="Heup" long_name="Euphotic layer depth" unit="m" /> |
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150 | <field id="Irondep" long_name="Iron deposition from dust" unit="mol/m2/s" /> |
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151 | <field id="Ironsed" long_name="Iron deposition from sediment" unit="mol/m2/s" grid_ref="grid_T_3D" /> |
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152 | |
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153 | |
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154 | <!-- PISCES with Kriest parametisation : variables available with key_kriest --> |
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155 | <field id="EPN100" long_name="Particulate number flux at 100 m" unit="mol/m2/s" /> |
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156 | <field id="EXPN" long_name="Particulate number flux" unit="mol/m2/s" grid_ref="grid_T_3D" /> |
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157 | <field id="XNUM" long_name="Number of particles in aggregats" unit="1" grid_ref="grid_T_3D" /> |
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158 | <field id="WSC" long_name="sinking speed of mass flux" unit="m2/s" grid_ref="grid_T_3D" /> |
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159 | <field id="WSN" long_name="sinking speed of number flux" unit="m2/s" grid_ref="grid_T_3D" /> |
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160 | |
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161 | <!-- dbio_T on T grid : variables available with key_diaar5 --> |
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162 | <field id="TPP" long_name="Total Primary production of phyto" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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163 | <field id="TPNEW" long_name="New Primary production of phyto" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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164 | <field id="TPBFE" long_name="Total biogenic iron production" unit="mol/m3/s" grid_ref="grid_T_3D" /> |
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165 | <field id="INTDIC" long_name="DIC content" unit="kg/m2" /> |
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166 | <field id="O2MIN" long_name="Oxygen minimum concentration" unit="mol/m3" /> |
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167 | <field id="ZO2MIN" long_name="Depth of oxygen minimum concentration" unit="m" /> |
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168 | <field id="INTNFIX" long_name="Nitrogen fixation rate : vert. integrated" unit="mol/m2/s" /> |
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169 | <field id="INTPPPHY" long_name="Vertically integrated primary production by nanophy" unit="mol/m2/s" /> |
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170 | <field id="INTPPPHY2" long_name="Vertically integrated primary production by diatom" unit="mol/m2/s" /> |
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171 | <field id="INTPP" long_name="Vertically integrated primary production by phyto" unit="mol/m2/s" /> |
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172 | <field id="INTPNEW" long_name="Vertically integrated new primary production" unit="mol/m2/s" /> |
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173 | <field id="INTPBFE" long_name="Vertically integrated of biogenic iron production" unit="mol/m2/s" /> |
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174 | <field id="INTPBSI" long_name="Vertically integrated of biogenic Si production" unit="mol/m2/s" /> |
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175 | <field id="INTPCAL" long_name="Vertically integrated of calcite production" unit="mol/m2/s" /> |
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176 | |
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177 | <!-- PISCES light : variables available with key_pisces_reduced --> |
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178 | <field id="FNO3PHY" long_name="FNO3PHY" unit="" grid_ref="grid_T_3D" /> |
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179 | <field id="FNH4PHY" long_name="FNH4PHY" unit="" grid_ref="grid_T_3D" /> |
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180 | <field id="FNH4NO3" long_name="FNH4NO3" unit="" grid_ref="grid_T_3D" /> |
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181 | <field id="TNO3PHY" long_name="TNO3PHY" unit="" /> |
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182 | <field id="TNH4PHY" long_name="TNH4PHY" unit="" /> |
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183 | <field id="TPHYDOM" long_name="TPHYDOM" unit="" /> |
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184 | <field id="TPHYNH4" long_name="TPHYNH4" unit="" /> |
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185 | <field id="TPHYZOO" long_name="TPHYZOO" unit="" /> |
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186 | <field id="TPHYDET" long_name="TPHYDET" unit="" /> |
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187 | <field id="TDETZOO" long_name="TDETZOO" unit="" /> |
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188 | <field id="TZOODET" long_name="TZOODET" unit="" /> |
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189 | <field id="TZOOBOD" long_name="TZOOBOD" unit="" /> |
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190 | <field id="TZOONH4" long_name="TZOONH4" unit="" /> |
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191 | <field id="TZOODOM" long_name="TZOODOM" unit="" /> |
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192 | <field id="TNH4NO3" long_name="TNH4NO3" unit="" /> |
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193 | <field id="TDOMNH4" long_name="TDOMNH4" unit="" /> |
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194 | <field id="TDETNH4" long_name="TDETNH4" unit="" /> |
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195 | <field id="TPHYTOT" long_name="TPHYTOT" unit="" /> |
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196 | <field id="TZOOTOT" long_name="TZOOTOT" unit="" /> |
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197 | <field id="SEDPOC" long_name="SEDPOC" unit="" /> |
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198 | <field id="TDETSED" long_name="TDETSED" unit="" /> |
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199 | |
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200 | <!-- CFC11 : variables available with key_cfc --> |
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201 | <field id="qtrCFC11" long_name="Air-sea flux of CFC-11" unit="mol/m2/s" /> |
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202 | <field id="qintCFC11" long_name="Cumulative air-sea flux of CFC-11" unit="mol/m2" /> |
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203 | |
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204 | <!-- Bomb C14 : variables available with key_c14b --> |
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205 | <field id="qtrC14b" long_name="Air-sea flux of Bomb C14" unit="mol/m2/s" /> |
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206 | <field id="qintC14b" long_name="Cumulative air-sea flux of Bomb C14" unit="mol/m2" /> |
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207 | <field id="fdecay" long_name="Radiactive decay of Bomb C14" unit="mol/m3" grid_ref="grid_T_3D" /> |
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208 | </field_group> |
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209 | |
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210 | <field_group id="PISCES_scalar" grid_ref="grid_T_2D" > |
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211 | <field id="pno3tot" long_name="global mean nitrate concentration" unit="mol/m3" /> |
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212 | <field id="ppo4tot" long_name="global mean phosphorus concentration" unit="mol/m3" /> |
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213 | <field id="psiltot" long_name="global mean silicate concentration" unit="mol/m3" /> |
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214 | <field id="palktot" long_name="global mean alkalinity concentration" unit="mol/m3" /> |
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215 | <field id="pfertot" long_name="global mean iron concentration" unit="mol/m3" /> |
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216 | <field id="tcflx" long_name="total Flux of Carbon out of the ocean" unit="mol/s" /> |
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217 | <field id="tcflxcum" long_name="cumulative total Flux of Carbon out of the ocean" unit="mol/s" /> |
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218 | <field id="tcexp" long_name="total Carbon export at 100m" unit="mol/s" /> |
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219 | <field id="tintpp" long_name="global total integrated primary production" unit="mol/s" /> |
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220 | <field id="tnfix" long_name="global total nitrogen fixation" unit="mol/s" /> |
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221 | <field id="tdenit" long_name="Total denitrification" unit="mol/s" /> |
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222 | </field_group> |
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223 | |
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224 | </field_definition> |
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