1 | [Compatibility] |
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2 | libIGCM=1.0 |
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3 | |
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4 | [UserChoices] |
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5 | # The variable DefSuffix gives the suffix of the orchidee.def file to be used. |
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6 | # By default the file orchidee.def_Choi will be selected. |
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7 | # Sef DefSuffix=Choi (default) to activate default 2-layer Choisnel hydrology |
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8 | # Set DefSuffix=CWRR to activate 11-layer CWRR hydrology |
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9 | DefSuffix=CWRR |
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10 | |
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11 | VEGET_UPDATE=1Y |
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12 | |
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13 | |
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14 | # Specify output level for output files |
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15 | # Only the files sechiba_history.nc, sechiba_out_2.nc and sechiba_history_4dim.nc can be set here. |
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16 | # output_level_filename=0 : lowest level writing only variables needed for the monitoring |
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17 | # output_level_filename=12 : highest level which will output all variables |
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18 | # output_level_filename=NONE : deactivate the file |
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19 | output_level_sechiba_history = 11 |
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20 | output_level_sechiba_out_2 = NONE |
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21 | output_level_sechiba_history_4dim = 11 |
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22 | |
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23 | # Specify output frequency for each file [1y, 1mo, 1d, 10800s, 1ts] |
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24 | # Settings using WriteFrequency in config.card is not longer used |
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25 | output_freq_sechiba_history = 1mo |
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26 | output_freq_sechiba_out_2 = 10800s |
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27 | output_freq_sechiba_history_4dim = 1mo |
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28 | |
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29 | # put to y if we want to calcul bvoc |
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30 | CHEMISTRY_BVOC=n |
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31 | |
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32 | [InitialStateFiles] |
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33 | List= (${R_IN}/SRF/soils_param.nc, . ), \ |
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34 | (${R_IN}/SRF/reftemp.nc, . ), \ |
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35 | (${R_IN}/SRF/routing.nc, . ), \ |
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36 | (${R_IN}/SRF/SOIL/soil_bulk_and_ph.nc, .), \ |
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37 | (${R_IN}/SRF/albedo/alb_bg_modisopt_2D_ESA_v2.nc, alb_bg.nc ), \ |
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38 | (${R_IN}/SRF/cartepente2d_15min.nc, .) |
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39 | |
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40 | [BoundaryFiles] |
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41 | List= (${R_IN}/SRF/PFTMAPS/CMIP6/ESA-LUH2v2/historical/15PFT.v1/PFTmap_${year}.nc , PFTmap.nc) ,\ |
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42 | (${R_IN}/SRF/WOODHARVEST/LUH2v2/historical/woodharvest_${year}.nc , woodharvest.nc),\ |
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43 | (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/synthetic/historical/Nfer_pasture_${year}.nc , nfert_pasture.nc) ,\ |
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44 | (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/synthetic/historical/Nfer_cropland_${year}.nc , nfert_cropland.nc) ,\ |
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45 | (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/manure/historical/Nmanure_pasture_${year}.nc , nmanure_pasture.nc) ,\ |
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46 | (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/manure/historical/Nmanure_cropland_${year}.nc , nmanure_cropland.nc) ,\ |
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47 | (/ccc/work/cont003/gen6328/p529vui/NDEP_MAUREEN/CCMI_ndep_nhx_${year}.nc , ndep_nhx.nc), \ |
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48 | (/ccc/work/cont003/gen6328/p529vui/NDEP_MAUREEN/CCMI_ndep_noy_${year}.nc , ndep_noy.nc), \ |
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49 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/data_remap_cons/Glb_nonDairy_Cattle_CC2006_AD_grd_05NA.nc , nonDairy_Cattle_distr.nc), \ |
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50 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/data_remap_cons/Glb_Dairy_Cattle_CC2006_AD_grd_05NA.nc , Dairy_Cattle_distr.nc), \ |
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51 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/data_remap_cons/Glb_Pigs_CC2006_AD_grd_05NA.nc , Pig_distr.nc), \ |
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52 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/data_remap_cons/Glb_Small_ruminants_CC2006_AD_grd_05NA.nc , Small_ruminant_distr.nc), \ |
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53 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/data_remap_cons/Glb_Chicken_CC2006_AD_grd_05NA.nc , Chicken_distr.nc), \ |
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54 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/map_param_reg/non_dairy_weight.nc , nonDairy_Cattle_weight.nc), \ |
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55 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/map_param_reg/dairy_weight.nc , Dairy_Cattle_weight.nc), \ |
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56 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/map_param_reg/pig_weight.nc , Pig_weight.nc), \ |
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57 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/map_param_reg/small_rum_weight.nc , Small_ruminant_weight.nc), \ |
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58 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/map_param_reg/chicken_weight.nc , Chicken_weight.nc), \ |
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59 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/map_param_reg/non_dairy_man_prop.nc , nonDairy_Cattle_man_prop.nc), \ |
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60 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/map_param_reg/dairy_man_prop.nc , Dairy_Cattle_man_prop.nc), \ |
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61 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/map_param_reg/pig_man_prop.nc , Pig_man_prop.nc), \ |
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62 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/map_param_reg/small_rum_man_prop.nc , Small_ruminant_man_prop.nc), \ |
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63 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/map_param_reg/chicken_man_prop.nc , Chicken_man_prop.nc), \ |
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64 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/map_param_reg/non_dairy_diet_prop_adjusted_preci.nc , nonDairy_Cattle_diet_prop.nc), \ |
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65 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/map_param_reg/dairy_diet_prop_adjusted_preci.nc , Dairy_Cattle_diet_prop.nc), \ |
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66 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/map_param_reg/pig_diet_prop.nc , Pig_diet_prop.nc), \ |
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67 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/map_param_reg/small_rum_diet_prop_adjusted_preci.nc , Small_ruminant_diet_prop.nc), \ |
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68 | (/ccc/store/cont003/gen6328/beaudorm/Livestock_data/map_param_reg/chicken_diet_prop.nc , Chicken_diet_prop.nc),\ |
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69 | (/ccc/store/cont003/gen2201/beaudorm/HCAERS14414239ANT2-2005_2015_1M_inca_col_nh3_forORCH_0.5.nc , Concatm_monthly.nc), \ |
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70 | (/ccc/store/cont003/gen2201/beaudorm/HCAERS14414239ANT2-2005_2015_1Y_inca_col_nh3_forORCH_0.5.nc , Concatm_yearly.nc) |
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71 | |
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72 | |
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73 | ListNonDel= (${R_IN}/SRF/NITROGEN/BNF/bnf_1850.nc, bnf.nc) ,\ |
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74 | (${R_IN}/SRF/CO2/CO2_1700_2019_TRENDYv2020.txt, CO2.txt) |
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75 | |
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76 | # to decomment if we want to calcul bvoc - for this we need to activate CHEMISTRY_BVOC in orchidee.def |
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77 | #ListNonDel= (${R_IN}/SRF/chemistry/orchidee_fertilizer_1995.nc, .), \ |
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78 | # (${R_IN}/SRF/chemistry/orchidee_bbg_clim.nc, .) |
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79 | |
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80 | [SmoothFiles] |
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81 | List= () |
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82 | |
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83 | [ParametersFiles] |
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84 | List= (${SUBMIT_DIR}/PARAM/orchidee.def_${DefSuffix}, orchidee.def) ,\ |
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85 | (${MODIPSL}/modeles/ORCHIDEE/src_xml/file_def_orchidee.xml, .) ,\ |
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86 | (${MODIPSL}/modeles/ORCHIDEE/src_xml/context_input_orchidee.xml, .) ,\ |
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87 | (${MODIPSL}/modeles/ORCHIDEE/src_xml/context_orchidee.xml, .) ,\ |
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88 | (${MODIPSL}/modeles/ORCHIDEE/src_xml/field_def_orchidee.xml, .) |
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89 | |
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90 | [RestartFiles] |
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91 | List= (sechiba_rest_out.nc, sechiba_rest.nc, sechiba_rest_in.nc) |
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92 | |
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93 | [OutputText] |
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94 | List= (out_orchidee, orchidee.def, used_orchidee.def, iodef.xml, context_orchidee.xml, field_def_orchidee.xml, file_def_orchidee.xml, river_desc.nc, file_def_input_orchidee.xml) |
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95 | |
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96 | [OutputFiles] |
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97 | List= (sechiba_history.nc, ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history.nc, Post_1M_sechiba_history), \ |
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98 | (sechiba_history_4dim.nc,${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history_4dim.nc, NONE), \ |
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99 | (sechiba_out_2.nc, ${R_OUT_SRF_O_H}/${PREFIX}_HF_sechiba_out_2.nc, NONE) |
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100 | |
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101 | [Post_1M_sechiba_history] |
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102 | Patches = () |
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103 | GatherWithInternal = (lon, lat, time_counter, Areas, Contfrac, time_centered, time_centered_bounds) |
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104 | TimeSeriesVars2D = (nobiofrac, alb_nir, alb_vis, evap, fluxlat, fluxsens, netrad, qair, rain, runoff, snow, snownobio, snowf, frac_snow, subli, tair, temp_sol, tsol_max, tsol_min, drainage,mrsos, mrso, mrros, mrro, prveg, evspsblveg, evspsblsoi, tran, treeFrac, grassFrac, cropFrac, baresoilFrac, residualFrac, TWBR, riverflow, coastalflow, DelSoilMoist_daily, DelIntercept_daily, DelSWE_daily, delstock_routing, snowmelt, LAImean, transpir, evapnu) |
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105 | ChunckJob2D = NONE |
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106 | TimeSeriesVars3D = (lai, maxvegetfrac, vegetfrac, ptn, nee) |
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107 | ChunckJob3D = NONE |
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108 | Seasonal = ON |
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109 | |
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110 | [Post_HF_sechiba_out_2] |
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111 | Patches = () |
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112 | GatherWithInternal = (lon, lat, time_counter, Areas, Contfrac, time_centered, time_centered_bounds) |
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113 | TimeSeriesVars2D = (mrsos, mrro) |
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114 | ChunckJob2D = 50Y |
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115 | TimeSeriesVars3D = (ptn) |
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116 | ChunckJob3D = 10Y |
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117 | Seasonal = OFF |
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