[396] | 1 | #!/bin/ksh |
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| 2 | #----------------------------------------------------------------- |
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| 3 | function ATM_Initialize |
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| 4 | { |
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| 5 | IGCM_debug_PushStack "ATM_Initialize" |
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| 6 | |
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[671] | 7 | RESOL_ATM=$( echo $RESOL | awk "-Fx" '{print $2}' | awk "-F-" '{print $1}') |
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[396] | 8 | |
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[2275] | 9 | [ -f ${SUBMIT_DIR}/../.resol ] && eval $(grep RESOL_ATM_3D ${SUBMIT_DIR}/../.resol) || RESOL_ATM_3D=96x95x39 |
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[396] | 10 | |
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[659] | 11 | RESOL_ATM_Z=$( echo ${RESOL_ATM_3D} | awk "-Fx" '{print $3}' ) |
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[1802] | 12 | RESOL_ATM_X=$( echo ${RESOL_ATM_3D} | awk "-Fx" '{print $1}' ) |
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| 13 | RESOL_ATM_Y=$( echo ${RESOL_ATM_3D} | awk "-Fx" '{print $2}' ) |
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| 14 | RESOL_ATM_XY="${RESOL_ATM_X}x${RESOL_ATM_Y}" |
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[649] | 15 | |
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[1923] | 16 | ##-- Calendar type for LMDZ and create_etat0_limit |
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[697] | 17 | case ${config_UserChoices_CalendarType} in |
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| 18 | leap|gregorian) |
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[1923] | 19 | CalendarTypeForLmdz=earth_366d |
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| 20 | CalendarTypeForCreate=gregorian;; |
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[697] | 21 | noleap) |
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[1923] | 22 | CalendarTypeForLmdz=earth_365d |
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| 23 | CalendarTypeForCreate=${CalendarTypeForLmdz};; |
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[697] | 24 | 360d) |
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[1923] | 25 | CalendarTypeForLmdz=earth_360d |
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| 26 | CalendarTypeForCreate=${CalendarTypeForLmdz};; |
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[697] | 27 | *) |
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| 28 | CalendarTypeForLmdz=earth_360d |
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[1923] | 29 | CalendarTypeForCreate=${CalendarTypeForLmdz} |
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[697] | 30 | esac |
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| 31 | |
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[1541] | 32 | ##- LMDZ physics version |
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| 33 | ## Read LMDZ_Physics option in lmdz.card, if not present take default value AP (old physics) |
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| 34 | if [ ! X${lmdz_UserChoices_LMDZ_Physics} = X ] ; then |
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| 35 | LMDZ_Physics=${lmdz_UserChoices_LMDZ_Physics} |
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| 36 | else |
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| 37 | LMDZ_Physics=AP |
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| 38 | fi |
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| 39 | echo LMDZ physics version : ${LMDZ_Physics} |
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| 40 | |
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[1643] | 41 | ##- Create_etat0_limit version |
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[1782] | 42 | ## Define variable CREATE only if it is set in lmdz.card section UserChoices. |
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| 43 | ## This variable is only used in lmdz.card to choose input files. |
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| 44 | if [ ! X${lmdz_UserChoices_CREATE} = X ] ; then |
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| 45 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/COMP/lmdz.card UserChoices CREATE |
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| 46 | CREATE=${lmdz_UserChoices_CREATE} |
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| 47 | echo create_etat0_limit version : ${CREATE} |
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| 48 | fi |
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[1643] | 49 | |
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[1782] | 50 | |
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[1550] | 51 | ## - LMDZ choice of config.def file |
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| 52 | ## ConfType must be set in lmdz.card |
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| 53 | ConfType=${lmdz_UserChoices_ConfType} |
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[1541] | 54 | |
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[1550] | 55 | ##- LMDZ output level, to be set in lmdz.card |
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| 56 | if [ X${lmdz_UserChoices_OutLevel} = X ] ; then |
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| 57 | # OutLevel is not set. Take default value low. |
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| 58 | OutLevel=low |
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| 59 | else |
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| 60 | OutLevel=${lmdz_UserChoices_OutLevel} |
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| 61 | fi |
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| 62 | |
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[1539] | 63 | ##-- Output frequency purpose .... |
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[396] | 64 | ##-- Initialisation .... |
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[1539] | 65 | ok_mensuel=n |
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| 66 | ok_journe=n |
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[396] | 67 | ok_hf=n |
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[1539] | 68 | ok_hf3h=n |
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| 69 | ok_hf3hm=n |
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| 70 | ok_stn=n |
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[396] | 71 | |
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| 72 | case ${config_UserChoices_PeriodLength} in |
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[1539] | 73 | 1Y|1y|1M|1m) ok_mensuel=y ;; |
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| 74 | 5D|5d|1D|1d) ok_journe=y ;; |
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[396] | 75 | esac |
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| 76 | |
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| 77 | for frequency in ${config_ATM_WriteFrequency} ; do |
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| 78 | case ${frequency} in |
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[1539] | 79 | 1M|1m) ok_mensuel=y ;; |
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[396] | 80 | esac |
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| 81 | case ${frequency} in |
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[1539] | 82 | 5D|5d|1D|1d) ok_journe=y ;; |
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| 83 | esac |
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| 84 | case ${frequency} in |
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[396] | 85 | HF|hf) ok_hf=y ;; |
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| 86 | esac |
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[1539] | 87 | case ${frequency} in |
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| 88 | HF3h|hf3h) ok_hf3h=y ;; |
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| 89 | esac |
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| 90 | case ${frequency} in |
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| 91 | HF3hm|hf3hm) ok_hf3hm=y ;; |
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| 92 | esac |
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| 93 | case ${frequency} in |
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| 94 | STN|stn) ok_stn=y ;; |
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| 95 | esac |
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[396] | 96 | done |
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| 97 | |
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[902] | 98 | ## Read LMDZ_NbPeriod_adjust option in lmdz.card |
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[1688] | 99 | if [ X"${lmdz_UserChoices_LMDZ_NbPeriod_adjust}" = X"" ] ; then |
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| 100 | # The variable is not in lmdz.card, set default value |
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| 101 | LMDZ_NbPeriod_adjust=0 |
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| 102 | else |
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| 103 | LMDZ_NbPeriod_adjust=${lmdz_UserChoices_LMDZ_NbPeriod_adjust} |
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| 104 | fi |
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[396] | 105 | |
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[815] | 106 | if [ ${LMDZ_NbPeriod_adjust} -eq 0 ] ; then |
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[1688] | 107 | LMDZ_Bands_file_name=${lmdz_UserChoices_LMDZ_Bands_file_name} |
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[815] | 108 | fi |
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| 109 | |
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[912] | 110 | |
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[1783] | 111 | ## Read LMDZ_COSP_OK in lmdz.card |
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| 112 | if [ ! X${lmdz_UserChoices_LMDZ_COSP_OK} = X ] ; then |
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| 113 | LMDZ_COSP_OK=${lmdz_UserChoices_LMDZ_COSP_OK} |
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| 114 | else |
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| 115 | LMDZ_COSP_OK=n |
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| 116 | fi |
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| 117 | ## Read LMDZ_COSP_monthly in lmdz.card |
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| 118 | if [ ! X${lmdz_UserChoices_LMDZ_COSP_monthly} = X ] ; then |
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| 119 | LMDZ_COSP_monthly=${lmdz_UserChoices_LMDZ_COSP_monthly} |
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| 120 | else |
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| 121 | LMDZ_COSP_monthly=n |
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| 122 | fi |
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| 123 | ## Read LMDZ_COSP_daily in lmdz.card |
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| 124 | if [ ! X${lmdz_UserChoices_LMDZ_COSP_daily} = X ] ; then |
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| 125 | LMDZ_COSP_daily=${lmdz_UserChoices_LMDZ_COSP_daily} |
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| 126 | else |
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| 127 | LMDZ_COSP_daily=n |
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| 128 | fi |
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| 129 | ## Read LMDZ_COSP_hf in lmdz.card |
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| 130 | if [ ! X${lmdz_UserChoices_LMDZ_COSP_hf} = X ] ; then |
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| 131 | LMDZ_COSP_hf=${lmdz_UserChoices_LMDZ_COSP_hf} |
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| 132 | else |
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| 133 | LMDZ_COSP_hf=n |
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| 134 | fi |
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[1000] | 135 | |
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[1783] | 136 | ## Read LMDZ_NMC_monthly in lmdz.card |
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| 137 | if [ ! X${lmdz_UserChoices_LMDZ_NMC_monthly} = X ] ; then |
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| 138 | LMDZ_NMC_monthly=${lmdz_UserChoices_LMDZ_NMC_monthly} |
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| 139 | else |
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| 140 | LMDZ_NMC_monthly=n |
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| 141 | fi |
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[1000] | 142 | |
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[1783] | 143 | ## Read LMDZ_NMC_daily in lmdz.card |
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| 144 | if [ ! X${lmdz_UserChoices_LMDZ_NMC_daily} = X ] ; then |
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| 145 | LMDZ_NMC_daily=${lmdz_UserChoices_LMDZ_NMC_daily} |
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| 146 | else |
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| 147 | LMDZ_NMC_daily=n |
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| 148 | fi |
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| 149 | |
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| 150 | ## Read LMDZ_NMC_hf in lmdz.card |
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| 151 | if [ ! X${lmdz_UserChoices_LMDZ_NMC_hf} = X ] ; then |
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| 152 | LMDZ_NMC_hf=${lmdz_UserChoices_LMDZ_NMC_hf} |
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| 153 | else |
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| 154 | LMDZ_NMC_hf=n |
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| 155 | fi |
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| 156 | |
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| 157 | |
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[396] | 158 | IGCM_debug_PopStack "ATM_Initialize" |
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| 159 | } |
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| 160 | |
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| 161 | #----------------------------------------------------------------- |
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| 162 | function ATM_Update |
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| 163 | { |
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| 164 | IGCM_debug_PushStack "ATM_Update" |
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| 165 | |
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[1537] | 166 | |
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[749] | 167 | case ${config_UserChoices_PeriodLength} in |
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| 168 | *Y|*y) |
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| 169 | LMDZ_ecrit_ISCCP=30. |
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| 170 | LMDZ_periodav=30. |
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[755] | 171 | if [ "${config_UserChoices_CalendarType}" != "360d" ] ; then |
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[1649] | 172 | echo Do not consider following warning if your running create_etat0_limit : |
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[1650] | 173 | echo WARNING !!! For lmdz : calendartype in config.card. PeriodLength=1Y allowed only for CalendarType=360d |
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[1649] | 174 | fi |
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[749] | 175 | ;; |
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| 176 | *) |
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| 177 | LMDZ_ecrit_ISCCP=${PeriodLengthInDays}. |
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| 178 | LMDZ_periodav=${PeriodLengthInDays}. |
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| 179 | ;; |
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| 180 | esac |
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[1546] | 181 | |
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[396] | 182 | ##-- Remise ou non a zero de la date initiale de LMDZ pour le fichier run.def |
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| 183 | if [ ${CumulPeriod} -eq 1 ] ; then |
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| 184 | RAZ_DATE=1 |
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| 185 | else |
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| 186 | RAZ_DATE=0 |
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| 187 | fi |
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| 188 | |
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[1892] | 189 | ## Algorithme for special treatment for Bands_xxx file |
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| 190 | ## For CumulPeriod=1 ; |
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| 191 | ## IF NbPeriod_Adjust = 0 ; set LMDZ_adjust=n |
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| 192 | ## IF LMDZ_Bands_file_name was given in lmdz.card THEN Get Bands file directly from server. Store it later with _0 suffix. |
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| 193 | ## IF no LMDZ_Bands_file_name was given, start without Bands file. Store it later with _0 suffix. |
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| 194 | ## ELSE set LMDZ_adjust=y ; start without Bands file ; Store it later in PARAM/ directory in submit directory with suffix _1 ; |
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| 195 | ## |
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| 196 | ## For CumulPeriod=2 to LMDZ_NbPeriod_adjust ; |
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| 197 | ## Get Bands file from PARAM/ in submit directory (CumulPeriod-1) ; set LMDZ_adjust=y ; Store Bands file in PARAM/ ; |
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| 198 | ## |
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| 199 | ## For CumulPeriod > LMDZ_NbPeriod_adjust ; LMDZ_adjust=n ; Get Bands file from PARAM/ ; Do not store ; |
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[815] | 200 | |
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| 201 | if [ ${CumulPeriod} -eq 1 ] ; then |
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| 202 | if [ ${LMDZ_NbPeriod_adjust} -eq 0 ] ; then |
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[1778] | 203 | if [ ! X${LMDZ_Bands_file_name} = X ] ; then |
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[1688] | 204 | IGCM_sys_Get ${LMDZ_Bands_file_name} Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat |
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| 205 | IGCM_sys_Chmod u+w Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat |
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| 206 | IGCM_debug_Print 1 "Bands file forced to ${LMDZ_Bands_file_name} and stored in ${config_UserChoices_JobName}_Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat_0" |
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| 207 | fi |
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[815] | 208 | fi |
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| 209 | fi |
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| 210 | |
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[743] | 211 | LMDZ_adjust=n |
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| 212 | [ ${CumulPeriod} -le ${LMDZ_NbPeriod_adjust} ] && LMDZ_adjust=y |
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| 213 | |
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[815] | 214 | RefPeriod=${LMDZ_NbPeriod_adjust} #0 to use a Bands file from Restart |
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| 215 | [ ${CumulPeriod} -le ${LMDZ_NbPeriod_adjust} ] && (( RefPeriod = ${CumulPeriod} - 1 )) |
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[743] | 216 | |
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[1897] | 217 | # Get Bands file from PARAM directory if file exist |
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[1998] | 218 | if ( [ ${CumulPeriod} -gt 1 ] && [ -f ${SUBMIT_DIR}/PARAM/${config_UserChoices_JobName}_Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat_${RefPeriod} ] ) ; then |
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[1894] | 219 | IGCM_sys_Cp ${SUBMIT_DIR}/PARAM/${config_UserChoices_JobName}_Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat_${RefPeriod} Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat |
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[1892] | 220 | IGCM_sys_Chmod u+w Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat |
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| 221 | fi |
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[743] | 222 | |
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[1535] | 223 | ##-- GHG forcing : |
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[2321] | 224 | ## If forcing file exist in run directory, read values for the current year |
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| 225 | ## and set in config.def. If not use the default value set in config.def |
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[2343] | 226 | |
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| 227 | # Read value for solaire from file SOLARANDVOLCANOES.txt. If file not existing, take DEFAULT value from file. |
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[1535] | 228 | if [ -f SOLARANDVOLCANOES.txt ] ; then |
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[2343] | 229 | value=`grep Annee_${year} SOLARANDVOLCANOES.txt | awk -F= '{print $2}'` |
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| 230 | if [ X"${value}" = X ] ; then |
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[2321] | 231 | # The grep returned empty variable, stop execution |
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| 232 | IGCM_debug_Exit "The file SOLARANDVOLCANOES.txt do not contain the current year." |
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| 233 | IGCM_debug_Verif_Exit |
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| 234 | fi |
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[1690] | 235 | else |
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[2343] | 236 | value=DEFAULT |
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[1535] | 237 | fi |
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[2343] | 238 | IGCM_comp_modifyDefFile nonblocker config.def solaire $value |
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[2321] | 239 | |
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[2343] | 240 | |
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| 241 | # Read value for co2_ppm from file CO2.txt. If file not existing, take DEFAULT value from file. |
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[1535] | 242 | if [ -f CO2.txt ] ; then |
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[2343] | 243 | value=`grep Annee_${year} CO2.txt | awk -F= '{print $2}'` |
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| 244 | if [ X"${value}" = X ] ; then |
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[2321] | 245 | # The grep returned empty variable, stop execution |
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| 246 | IGCM_debug_Exit "The file CO2.txt do not contain the current year." |
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| 247 | IGCM_debug_Verif_Exit |
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| 248 | fi |
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[1690] | 249 | else |
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[2343] | 250 | value=DEFAULT |
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[1535] | 251 | fi |
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[2343] | 252 | IGCM_comp_modifyDefFile nonblocker config.def co2_ppm $value |
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[1690] | 253 | |
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[2343] | 254 | |
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| 255 | # Read value for CH4_ppb from file CH4.txt. If file not existing, take DEFAULT value from file. |
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[1535] | 256 | if [ -f CH4.txt ] ; then |
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[2343] | 257 | value=`grep Annee_${year} CH4.txt | awk -F= '{print $2}'` |
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| 258 | if [ X"${value}" = X ] ; then |
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[2321] | 259 | # The grep returned empty variable, stop execution |
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| 260 | IGCM_debug_Exit "The file CH4.txt do not contain the current year." |
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| 261 | IGCM_debug_Verif_Exit |
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| 262 | fi |
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[2343] | 263 | else |
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| 264 | value=DEFAULT |
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[1535] | 265 | fi |
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[2343] | 266 | IGCM_comp_modifyDefFile nonblocker config.def CH4_ppb $value |
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[2321] | 267 | |
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[2343] | 268 | |
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| 269 | # Read value for N2O_ppb from file N2O.txt. If file not existing, take DEFAULT value from file. |
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[1535] | 270 | if [ -f N2O.txt ] ; then |
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[2343] | 271 | value=`grep Annee_${year} N2O.txt | awk -F= '{print $2}'` |
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| 272 | if [ X"${value}" = X ] ; then |
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[2321] | 273 | # The grep returned empty variable, stop execution |
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| 274 | IGCM_debug_Exit "The file N2O.txt do not contain the current year." |
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| 275 | IGCM_debug_Verif_Exit |
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| 276 | fi |
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[1690] | 277 | else |
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[2343] | 278 | value=DEFAULT |
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[1535] | 279 | fi |
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[2343] | 280 | IGCM_comp_modifyDefFile nonblocker config.def N2O_ppb $value |
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[2321] | 281 | |
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[2343] | 282 | # Read value for CFC11_ppt from file CFC11.txt. If file not existing, take DEFAULT value from file. |
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[1535] | 283 | if [ -f CFC11.txt ] ; then |
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[2343] | 284 | value=`grep Annee_${year} CFC11.txt | awk -F= '{print $2}'` |
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| 285 | if [ X"${value}" = X ] ; then |
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[2321] | 286 | # The grep returned empty variable, stop execution |
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| 287 | IGCM_debug_Exit "The file CFC11.txt do not contain the current year." |
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| 288 | IGCM_debug_Verif_Exit |
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| 289 | fi |
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[1690] | 290 | else |
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[2343] | 291 | value=DEFAULT |
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[1535] | 292 | fi |
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[2343] | 293 | IGCM_comp_modifyDefFile nonblocker config.def CFC11_ppt $value |
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[2321] | 294 | |
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[2343] | 295 | |
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| 296 | # Read value for CFC12_ppt from file CFC12.txt. If file not existing, take DEFAULT value from file. |
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[1535] | 297 | if [ -f CFC12.txt ] ; then |
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[2343] | 298 | value=`grep Annee_${year} CFC12.txt | awk -F= '{print $2}'` |
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| 299 | if [ X"${value}" = X ] ; then |
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[2321] | 300 | # The grep returned empty variable, stop execution |
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| 301 | IGCM_debug_Exit "The file CFC12.txt do not contain the current year." |
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| 302 | IGCM_debug_Verif_Exit |
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| 303 | fi |
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[1690] | 304 | else |
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[2343] | 305 | value=DEFAULT |
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[1535] | 306 | fi |
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[2343] | 307 | IGCM_comp_modifyDefFile nonblocker config.def CFC12_ppt $value |
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[1535] | 308 | |
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[2321] | 309 | |
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[2343] | 310 | ## Coupling Time Step : Take value of FreqCoupling set in oasis.card or if it is not set, take default value 86400 |
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| 311 | LMDZ_t_coupl=${oasis_UserChoices_FreqCoupling:-86400} |
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[2275] | 312 | IGCM_debug_Print 3 "LMDZ_t_coupl " ${LMDZ_t_coupl} |
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[2343] | 313 | IGCM_comp_modifyDefFile nonblocker config.def t_coupl ${LMDZ_t_coupl} |
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[1780] | 314 | |
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| 315 | ##-- Add special treatement for CARBON CYCLE |
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[1546] | 316 | if [ X"${lmdz_UserChoices_CARBON_CYCLE}" = X"control" ] || [ X"${lmdz_UserChoices_CARBON_CYCLE}" = X"historical" ] ; then |
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[1780] | 317 | ATM_Carbon_Update |
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| 318 | fi |
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[1537] | 319 | |
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| 320 | |
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[1538] | 321 | ##-- Set LMDZ_COSP_daily1979=y in section UserChoices in lmdz.card to activate |
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| 322 | ## COSP daily output for years 1979 and later (mandatory for historical CMIP5 run). |
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| 323 | if ([ X"${lmdz_UserChoices_LMDZ_COSP_daily1979}" = X"y" ] && [ ${year} -ge 1979 ]) ; then |
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| 324 | LMDZ_COSP_daily=y |
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| 325 | fi |
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[1537] | 326 | |
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[1538] | 327 | |
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[1540] | 328 | ## output.def parameters |
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[1546] | 329 | # columns in phys_output_filekeys refer to the filenames given in phys_out_filenames in output.def : |
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[2343] | 330 | # histmth histday histhf histhf3h histhf3hm histstn |
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| 331 | IGCM_comp_modifyDefFile nonblocker output.def phys_out_filekeys "${ok_mensuel} ${ok_journe} ${ok_hf} ${ok_hf3h} ${ok_hf3hm} ${ok_stn}" |
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| 332 | IGCM_comp_modifyDefFile nonblocker output.def ecrit_ISCCP ${LMDZ_ecrit_ISCCP} |
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| 333 | IGCM_comp_modifyDefFile nonblocker output.def ok_cosp ${LMDZ_COSP_OK} |
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| 334 | IGCM_comp_modifyDefFile nonblocker output.def ok_mensuelCOSP ${LMDZ_COSP_monthly} |
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| 335 | IGCM_comp_modifyDefFile nonblocker output.def ok_journeCOSP ${LMDZ_COSP_daily} |
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| 336 | IGCM_comp_modifyDefFile nonblocker output.def ok_hfCOSP ${LMDZ_COSP_hf} |
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| 337 | IGCM_comp_modifyDefFile nonblocker output.def ok_histNMC "${LMDZ_NMC_monthly} ${LMDZ_NMC_daily} ${LMDZ_NMC_hf}" |
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[396] | 338 | |
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[2300] | 339 | # XIOS XML definition |
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| 340 | # Default init : files are desactivated |
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[2343] | 341 | IGCM_comp_modifyXmlFile force file_def_histmth_lmdz.xml histmth enabled .FALSE. |
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| 342 | IGCM_comp_modifyXmlFile force file_def_histday_lmdz.xml histday enabled .FALSE. |
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| 343 | IGCM_comp_modifyXmlFile force file_def_histhf_lmdz.xml histhf enabled .FALSE. |
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| 344 | # IGCM_comp_modifyXmlFile force file_def_histhf3h_lmdz.xml histhf3h enabled .FALSE. |
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| 345 | # IGCM_comp_modifyXmlFile force file_def_histhf3hm_lmdz.xml histhf3hm enabled .FALSE. |
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| 346 | IGCM_comp_modifyXmlFile force file_def_histstn_lmdz.xml histstn enabled .FALSE. |
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| 347 | IGCM_comp_modifyXmlFile force file_def_histmthNMC_lmdz.xml histmthNMC enabled .FALSE. |
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| 348 | IGCM_comp_modifyXmlFile force file_def_histdayNMC_lmdz.xml histdayNMC enabled .FALSE. |
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| 349 | IGCM_comp_modifyXmlFile force file_def_histhfNMC_lmdz.xml histhfNMC enabled .FALSE. |
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[2302] | 350 | if [ X${lmdz_UserChoices_XIOS} = Xy ] ; then |
---|
[2300] | 351 | # Default output level : 5 |
---|
[2343] | 352 | IGCM_comp_modifyXmlFile force file_def_histmth_lmdz.xml histmth output_level 5 |
---|
| 353 | IGCM_comp_modifyXmlFile force file_def_histday_lmdz.xml histday output_level 5 |
---|
| 354 | IGCM_comp_modifyXmlFile force file_def_histhf_lmdz.xml histhf output_level 5 |
---|
| 355 | # IGCM_comp_modifyXmlFile force file_def_histhf3h_lmdz.xml histhf3h output_level 5 |
---|
| 356 | # IGCM_comp_modifyXmlFile force file_def_histhf3hm_lmdz.xml histhf3hm output_level 5 |
---|
| 357 | IGCM_comp_modifyXmlFile force file_def_histstn_lmdz.xml histstn output_level 5 |
---|
| 358 | IGCM_comp_modifyXmlFile force file_def_histmthNMC_lmdz.xml histmthNMC output_level 5 |
---|
| 359 | IGCM_comp_modifyXmlFile force file_def_histdayNMC_lmdz.xml histdayNMC output_level 5 |
---|
| 360 | IGCM_comp_modifyXmlFile force file_def_histhfNMC_lmdz.xml histhfNMC output_level 5 |
---|
[2300] | 361 | # Filling of XML files |
---|
| 362 | if [ X${ok_mensuel} = Xy ] ; then |
---|
[2343] | 363 | IGCM_comp_modifyXmlFile force file_def_histmth_lmdz.xml histmth enabled .TRUE. |
---|
| 364 | IGCM_comp_modifyXmlFile force file_def_histmth_lmdz.xml histmth output_freq 1mo |
---|
| 365 | IGCM_comp_modifyXmlFile force file_def_histmth_lmdz.xml histmth name histmth |
---|
[2300] | 366 | fi |
---|
| 367 | if [ X${ok_journe} = Xy ] ; then |
---|
[2343] | 368 | IGCM_comp_modifyXmlFile force file_def_histday_lmdz.xml histday enabled .TRUE. |
---|
| 369 | IGCM_comp_modifyXmlFile force file_def_histday_lmdz.xml histday output_freq 1d |
---|
| 370 | IGCM_comp_modifyXmlFile force file_def_histday_lmdz.xml histday name histday |
---|
[2300] | 371 | if [ X${OutLevel} = Xlow ] || [ X${OutLevel} = Xmedium ] ; then |
---|
[2343] | 372 | IGCM_comp_modifyXmlFile force file_def_histday_lmdz.xml histday output_level 2 |
---|
[2300] | 373 | fi |
---|
| 374 | fi |
---|
| 375 | if [ X${ok_hf} = Xy ] ; then |
---|
[2343] | 376 | IGCM_comp_modifyXmlFile force file_def_histhf_lmdz.xml histhf enabled .TRUE. |
---|
| 377 | IGCM_comp_modifyXmlFile force file_def_histhf_lmdz.xml histhf output_freq 6h |
---|
| 378 | IGCM_comp_modifyXmlFile force file_def_histhf_lmdz.xml histhf name histhf |
---|
[2300] | 379 | if [ X${OutLevel} = Xlow ] ; then |
---|
[2343] | 380 | IGCM_comp_modifyXmlFile force file_def_histhf_lmdz.xml histhf output_level 2 |
---|
[2300] | 381 | fi |
---|
| 382 | fi |
---|
[2343] | 383 | # if [ X${ok_hf3h} = Xy ] ; then |
---|
| 384 | # IGCM_comp_modifyXmlFile force file_def_histhf3h_lmdz.xml histhf3h enabled .TRUE. |
---|
| 385 | # IGCM_comp_modifyXmlFile force file_def_histhf3h_lmdz.xml histhf3h output_freq 3h |
---|
| 386 | # IGCM_comp_modifyXmlFile force file_def_histhf3h_lmdz.xml histhf3h name histhf3h |
---|
| 387 | # fi |
---|
| 388 | # if [ X${ok_hf3hm} = Xy ] ; then |
---|
| 389 | # IGCM_comp_modifyXmlFile force file_def_histhf3hm_lmdz.xml histhf3hm enabled .TRUE. |
---|
| 390 | # IGCM_comp_modifyXmlFile force file_def_histhf3hm_lmdz.xml histhf3hm output_freq 3h |
---|
| 391 | # IGCM_comp_modifyXmlFile force file_def_histhf3hm_lmdz.xml histhf3hm name histhf3hm |
---|
| 392 | # fi |
---|
[2300] | 393 | if [ X${ok_stn} = Xy ] ; then |
---|
[2343] | 394 | IGCM_comp_modifyXmlFile force file_def_histstn_lmdz.xml histstn enabled .TRUE. |
---|
| 395 | IGCM_comp_modifyXmlFile force file_def_histstn_lmdz.xml histstn output_freq 1800s |
---|
| 396 | IGCM_comp_modifyXmlFile force file_def_histstn_lmdz.xml histstn name histstn |
---|
[2300] | 397 | fi |
---|
| 398 | if [ X${LMDZ_NMC_monthly} = Xy ] ; then |
---|
[2343] | 399 | IGCM_comp_modifyXmlFile force file_def_histmthNMC_lmdz.xml histmthNMC enabled .TRUE. |
---|
| 400 | IGCM_comp_modifyXmlFile force file_def_histmthNMC_lmdz.xml histmthNMC output_freq 1mo |
---|
| 401 | IGCM_comp_modifyXmlFile force file_def_histmthNMC_lmdz.xml histmthNMC name histmthNMC |
---|
[2300] | 402 | fi |
---|
| 403 | if [ X${LMDZ_NMC_daily} = Xy ] ; then |
---|
[2343] | 404 | IGCM_comp_modifyXmlFile force file_def_histdayNMC_lmdz.xml histdayNMC enabled .TRUE. |
---|
| 405 | IGCM_comp_modifyXmlFile force file_def_histdayNMC_lmdz.xml histdayNMC output_freq 1d |
---|
| 406 | IGCM_comp_modifyXmlFile force file_def_histdayNMC_lmdz.xml histdayNMC name histdayNMC |
---|
[2300] | 407 | fi |
---|
| 408 | if [ X${LMDZ_NMC_hf} = Xy ] ; then |
---|
[2343] | 409 | IGCM_comp_modifyXmlFile force file_def_histhfNMC_lmdz.xml histhfNMC enabled .TRUE. |
---|
| 410 | IGCM_comp_modifyXmlFile force file_def_histhfNMC_lmdz.xml histhfNMC output_freq 6h |
---|
| 411 | IGCM_comp_modifyXmlFile force file_def_histhfNMC_lmdz.xml histhfNMC name histhfNMC |
---|
[2300] | 412 | fi |
---|
| 413 | fi |
---|
| 414 | |
---|
[1544] | 415 | ## gcm.def parameters : |
---|
[2343] | 416 | # Modification of variable iphysiq depending on the physics |
---|
[2270] | 417 | if [ X${LMDZ_Physics} = X"AP" ] ; then |
---|
[2470] | 418 | if [ ${RESOL_ATM_3D} = 96x95x39 ]; then |
---|
| 419 | value=10 |
---|
| 420 | elif [ ${RESOL_ATM_3D} = 144x142x39 ]; then |
---|
| 421 | value=15 |
---|
| 422 | else |
---|
| 423 | IGCM_debug_Print 1 "LMDZ_Physics=${LMDZ_Physics} has not been tested for the current resolution RESOL_ATM_3D=${RESOL_ATM_3D}. " |
---|
| 424 | IGCM_debug_Print 1 "iphysiq must be defined for the current combination of resolution and phyiscs package" |
---|
| 425 | IGCM_debug_Exit "You need to add a special case in lmdz.driver to handle the above combination." |
---|
| 426 | fi |
---|
| 427 | elif [ X${LMDZ_Physics} = X"NPv3.1" ] ; then |
---|
| 428 | if [ ${RESOL_ATM_3D} = 96x95x39 ] ; then |
---|
| 429 | value=5 |
---|
| 430 | elif [ ${RESOL_ATM_3D} = 144x142x39 ] ; then |
---|
| 431 | value=5 |
---|
| 432 | else |
---|
| 433 | IGCM_debug_Print 1 "LMDZ_Physics=${LMDZ_Physics} has not been tested for the current resolution RESOL_ATM_3D=${RESOL_ATM_3D}. " |
---|
| 434 | IGCM_debug_Print 1 "iphysiq must be defined for the current combination of resolution and phyiscs package" |
---|
| 435 | IGCM_debug_Exit "You need to add a special case in lmdz.driver to handle the above combination." |
---|
| 436 | fi |
---|
| 437 | elif [ X${LMDZ_Physics} = X"NPv3.2" ] ; then |
---|
| 438 | if [ ${RESOL_ATM_3D} = 96x95x39 ] ; then |
---|
| 439 | value=5 |
---|
| 440 | elif [ ${RESOL_ATM_3D} = 144x142x39 ] ; then |
---|
| 441 | value=5 |
---|
| 442 | elif [ ${RESOL_ATM_3D} = 128x118x39 ] ; then |
---|
| 443 | value=15 |
---|
| 444 | else |
---|
| 445 | IGCM_debug_Print 1 "LMDZ_Physics=${LMDZ_Physics} has not been tested for the current resolution RESOL_ATM_3D=${RESOL_ATM_3D}. " |
---|
| 446 | IGCM_debug_Print 1 "iphysiq must be defined for the current combination of resolution and phyiscs package" |
---|
| 447 | IGCM_debug_Exit "You need to add a special case in lmdz.driver to handle the above combination." |
---|
| 448 | fi |
---|
[1690] | 449 | else |
---|
[2470] | 450 | # Take default value set in gcm.def |
---|
[2343] | 451 | value=DEFAULT |
---|
[1544] | 452 | fi |
---|
[2343] | 453 | IGCM_comp_modifyDefFile nonblocker gcm.def iphysiq $value |
---|
[2470] | 454 | |
---|
[396] | 455 | |
---|
[911] | 456 | ## run.def parameters |
---|
[2343] | 457 | IGCM_comp_modifyDefFile blocker run.def dayref ${InitDay} |
---|
| 458 | IGCM_comp_modifyDefFile blocker run.def nday ${PeriodLengthInDays} |
---|
| 459 | IGCM_comp_modifyDefFile blocker run.def raz_date ${RAZ_DATE} |
---|
| 460 | IGCM_comp_modifyDefFile blocker run.def periodav ${LMDZ_periodav} |
---|
| 461 | IGCM_comp_modifyDefFile nonblocker run.def adjust ${LMDZ_adjust} |
---|
[396] | 462 | |
---|
[1804] | 463 | # Set anneeref different for gcm and ce0l |
---|
[1923] | 464 | # Variable calend is different for a run with create_etat0_limit and the gcm |
---|
[1804] | 465 | # Test if executable create_etat0_limit is present and lmdz.x is not present |
---|
| 466 | if [ -f create_etat0_limit* ] || [ -f ce0l* ] && [ ! -f lmdz.x ] ; then |
---|
| 467 | # for case ce0l : always take current year |
---|
[2343] | 468 | IGCM_comp_modifyDefFile blocker run.def anneeref ${year} |
---|
| 469 | IGCM_comp_modifyDefFile blocker run.def calend ${CalendarTypeForCreate} |
---|
[1804] | 470 | else |
---|
| 471 | # for case gcm : take first year of simulation |
---|
[2343] | 472 | IGCM_comp_modifyDefFile blocker run.def anneeref ${InitYear} |
---|
| 473 | IGCM_comp_modifyDefFile blocker run.def calend ${CalendarTypeForLmdz} |
---|
[1804] | 474 | fi |
---|
[1643] | 475 | |
---|
[1804] | 476 | # Activate creation of file grilles_gcm.nc only at first period |
---|
| 477 | if [ ${CumulPeriod} -eq 1 ] ; then |
---|
[2343] | 478 | IGCM_comp_modifyDefFile nonblocker run.def grilles_gcm_netcdf y |
---|
[1804] | 479 | else |
---|
[2343] | 480 | IGCM_comp_modifyDefFile nonblocker run.def grilles_gcm_netcdf n |
---|
[1804] | 481 | fi |
---|
| 482 | |
---|
[1650] | 483 | ## Determine from the variable ListOfComponents in config.card coupling to external models |
---|
| 484 | ## and set corresponding parameters in run.def |
---|
| 485 | echo ListOfComponents now running : ${config_ListOfComponents[*]} |
---|
| 486 | |
---|
| 487 | if [ X${config_ListOfComponents_SRF} = Xorchidee ] ; then |
---|
| 488 | echo "Activate ORCHIDEE, set VEGET=y in run.def" |
---|
[2343] | 489 | IGCM_comp_modifyDefFile blocker run.def VEGET y |
---|
[1650] | 490 | else |
---|
| 491 | echo "No ORCHIDEE, set VEGET=n in run.def" |
---|
[2343] | 492 | IGCM_comp_modifyDefFile blocker run.def VEGET n |
---|
[1650] | 493 | fi |
---|
| 494 | |
---|
| 495 | if [ X${config_ListOfComponents_CPL} = Xoasis ] ; then |
---|
| 496 | echo "Activate coupling to ocean, set type_ocean=couple in run.def" |
---|
[2343] | 497 | IGCM_comp_modifyDefFile blocker run.def type_ocean couple |
---|
[1650] | 498 | else |
---|
| 499 | echo "LMDZ is running in forced mode without ocean model, set type_ocean=force in run.def" |
---|
[2343] | 500 | IGCM_comp_modifyDefFile blocker run.def type_ocean force |
---|
[1650] | 501 | fi |
---|
| 502 | |
---|
| 503 | if [ X${config_ListOfComponents_CHM} = Xinca ] ; then |
---|
| 504 | echo "Activate coupling to INCA, set type_trac=inca in run.def" |
---|
[2343] | 505 | IGCM_comp_modifyDefFile blocker run.def type_trac inca |
---|
[1650] | 506 | elif [ X${config_ListOfComponents_CHM} = Xreprobus ] ; then |
---|
| 507 | echo "Activate coupling to REPROBUS, set type_trac=repr in run.def" |
---|
[2343] | 508 | IGCM_comp_modifyDefFile blocker run.def type_trac repr |
---|
| 509 | IGCM_comp_modifyDefFile blocker run.def config_inca none |
---|
[1650] | 510 | else |
---|
| 511 | echo "No coupling to chemistry model, set type_trac=lmdz in run.def" |
---|
[2343] | 512 | IGCM_comp_modifyDefFile blocker run.def type_trac lmdz |
---|
| 513 | IGCM_comp_modifyDefFile blocker run.def config_inca none |
---|
[1650] | 514 | fi |
---|
| 515 | |
---|
| 516 | |
---|
[2015] | 517 | # config.def : Activate direct radiative effect if ok_ade=y |
---|
| 518 | if [ ! X${lmdz_UserChoices_ok_ade} = X ]; then |
---|
[2343] | 519 | IGCM_comp_modifyDefFile nonblocker config.def ok_ade ${lmdz_UserChoices_ok_ade} |
---|
[2015] | 520 | else |
---|
[2343] | 521 | IGCM_comp_modifyDefFile nonblocker config.def ok_ade n |
---|
[2015] | 522 | fi |
---|
| 523 | |
---|
| 524 | # config.def : Activate indirect radiative effect if ok_aie=y |
---|
| 525 | if [ ! X${lmdz_UserChoices_ok_aie} = X ]; then |
---|
[2343] | 526 | IGCM_comp_modifyDefFile nonblocker config.def ok_aie ${lmdz_UserChoices_ok_aie} |
---|
[2015] | 527 | else |
---|
[2343] | 528 | IGCM_comp_modifyDefFile nonblocker config.def ok_aie n |
---|
[2015] | 529 | fi |
---|
[1816] | 530 | |
---|
[2015] | 531 | # config.def : Activate online aerosol coupled model if aerosol_couple=y |
---|
| 532 | if [ ! X${lmdz_UserChoices_aerosol_couple} = X ]; then |
---|
[2343] | 533 | IGCM_comp_modifyDefFile nonblocker config.def aerosol_couple ${lmdz_UserChoices_aerosol_couple} |
---|
[1686] | 534 | else |
---|
[2343] | 535 | IGCM_comp_modifyDefFile nonblocker config.def aerosol_couple n |
---|
[2015] | 536 | fi |
---|
[1686] | 537 | |
---|
[2015] | 538 | # config.def : Activate reading of ozone in climatology if read_climoz=2 |
---|
| 539 | if [ ! X${lmdz_UserChoices_read_climoz} = X ]; then |
---|
[2343] | 540 | IGCM_comp_modifyDefFile nonblocker config.def read_climoz ${lmdz_UserChoices_read_climoz} |
---|
[2015] | 541 | else |
---|
[2343] | 542 | IGCM_comp_modifyDefFile nonblocker config.def read_climoz 0 |
---|
[2015] | 543 | fi |
---|
| 544 | |
---|
| 545 | # config.def : Choose aerosol use in radiative effect |
---|
| 546 | # type of coupled aerosol =1 (default) =2 => bc only =3 => pom only =4 => seasalt only |
---|
| 547 | # =5 => dust only =6 => all aerosol |
---|
| 548 | if [ ! X${lmdz_UserChoices_flag_aerosol} = X ]; then |
---|
[2343] | 549 | IGCM_comp_modifyDefFile nonblocker config.def flag_aerosol ${lmdz_UserChoices_flag_aerosol} |
---|
[2015] | 550 | else |
---|
[2343] | 551 | IGCM_comp_modifyDefFile nonblocker config.def flag_aerosol 0 |
---|
[2015] | 552 | fi |
---|
| 553 | |
---|
| 554 | # config.def : Activate calcul of Cloud droplet number concentration if ok_cdnc=y |
---|
| 555 | if [ ! X${lmdz_UserChoices_ok_cdnc} = X ]; then |
---|
[2343] | 556 | IGCM_comp_modifyDefFile nonblocker config.def ok_cdnc ${lmdz_UserChoices_ok_cdnc} |
---|
[2015] | 557 | else |
---|
[2343] | 558 | IGCM_comp_modifyDefFile nonblocker config.def ok_cdnc n |
---|
[2015] | 559 | fi |
---|
| 560 | |
---|
[1690] | 561 | # guide.def : Activate nudging if ok_guide=y set in lmdz.card |
---|
[1643] | 562 | if [ ! X${lmdz_UserChoices_ok_guide} = X ] ; then |
---|
[2343] | 563 | IGCM_comp_modifyDefFile nonblocker guide.def ok_guide ${lmdz_UserChoices_ok_guide} |
---|
[1690] | 564 | else |
---|
[2343] | 565 | IGCM_comp_modifyDefFile nonblocker guide.def ok_guide n |
---|
[1643] | 566 | fi |
---|
| 567 | |
---|
[902] | 568 | ## Read ByPass_hgardfou_teta option in lmdz.card --> divide teta* by 2 if [ $ByPass_hgardfou_teta = 1 ] |
---|
[1172] | 569 | ByPass_hgardfou_teta=${lmdz_UserChoices_ByPass_hgardfou_teta} |
---|
[1688] | 570 | if [ X"${ByPass_hgardfou_teta}" = X"y" ] ; then |
---|
[396] | 571 | awk '{ if ($0 ~ /^teta.*=/) {split($0,a,"=") ; print a[1]"="a[2]/2"."} else print $0}' gcm.def > gcm.def.tmp |
---|
| 572 | IGCM_sys_Mv gcm.def.tmp gcm.def |
---|
| 573 | echo |
---|
| 574 | IGCM_debug_Print 1 "ByPass_hgardfou_teta : ^teta*/2 in gcm.def" |
---|
| 575 | echo |
---|
| 576 | cat gcm.def |
---|
| 577 | ByPass_hgardfou_teta=n |
---|
[902] | 578 | IGCM_card_WriteOption ${SUBMIT_DIR}/COMP/lmdz.card UserChoices ByPass_hgardfou_teta "${ByPass_hgardfou_teta}" |
---|
[396] | 579 | fi |
---|
| 580 | |
---|
[902] | 581 | ## Read ByPass_hgardfou_mats option in lmdz.card --> purmats=y 2 if [ $ByPass_hgardfou_mats = 1 ] |
---|
[1172] | 582 | ByPass_hgardfou_mats=${lmdz_UserChoices_ByPass_hgardfou_mats} |
---|
[1688] | 583 | if [ X"${ByPass_hgardfou_mats}" = X"y" ] ; then |
---|
[396] | 584 | sed -e "s/^purmats=.*/purmats=y/" gcm.def > gcm.def.tmp |
---|
| 585 | IGCM_sys_Mv gcm.def.tmp gcm.def |
---|
| 586 | echo |
---|
| 587 | IGCM_debug_Print 1 "ByPass_hgardfou_mats : purmats=y in gcm.def" |
---|
| 588 | echo |
---|
| 589 | cat gcm.def |
---|
| 590 | ByPass_hgardfou_mats=n |
---|
[902] | 591 | IGCM_card_WriteOption ${SUBMIT_DIR}/COMP/lmdz.card UserChoices ByPass_hgardfou_mats "${ByPass_hgardfou_mats}" |
---|
[396] | 592 | fi |
---|
| 593 | |
---|
[2300] | 594 | if [ X${lmdz_UserChoices_XIOS} = Xy ] ; then |
---|
| 595 | # Add include of LMDZ context in iodef.xml |
---|
| 596 | # In iodef.xml add on next line after "COMPONENT CONTEXT" |
---|
| 597 | # <context id="LMDZ" src="./context_lmdz.xml"/> |
---|
| 598 | echo '<context id="LMDZ" src="./context_lmdz.xml"/>' > add.tmp |
---|
| 599 | cp iodef.xml iodef.xml.tmp |
---|
| 600 | sed -e "/COMPONENT CONTEXT/r add.tmp" \ |
---|
| 601 | iodef.xml.tmp > iodef.xml |
---|
| 602 | rm iodef.xml.tmp add.tmp |
---|
[2477] | 603 | |
---|
| 604 | # Set ok_all_xml=y in run.def |
---|
| 605 | IGCM_comp_modifyDefFile nonblocker run.def ok_all_xml y |
---|
| 606 | else |
---|
| 607 | # Deactivate ok_all_xml in run.def |
---|
| 608 | IGCM_comp_modifyDefFile nonblocker run.def ok_all_xml n |
---|
[2300] | 609 | fi |
---|
| 610 | |
---|
[396] | 611 | IGCM_debug_PopStack "ATM_Update" |
---|
| 612 | } |
---|
| 613 | |
---|
| 614 | #----------------------------------- |
---|
| 615 | function ATM_Finalize |
---|
| 616 | { |
---|
| 617 | IGCM_debug_PushStack "ATM_Finalize" |
---|
| 618 | |
---|
[1897] | 619 | # If the file exist, copy Bands_ file to PARAM/ in submit directory. This file will be used for the simulation. |
---|
[1892] | 620 | # Copy also the same file into ATM/Restart at ARCHIVE directory for backup. |
---|
[1897] | 621 | if [ -f Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat ] ; then |
---|
| 622 | if [ ${CumulPeriod} -le ${LMDZ_NbPeriod_adjust} ] ; then |
---|
| 623 | IGCM_sys_Cp Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat ${SUBMIT_DIR}/PARAM/${config_UserChoices_JobName}_Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat_${CumulPeriod} |
---|
| 624 | IGCM_sys_Put_Out Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat ${R_OUT_ATM_R}/${config_UserChoices_JobName}_Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat_${CumulPeriod} |
---|
| 625 | elif [ ${CumulPeriod} -eq 1 ] && [ ${LMDZ_NbPeriod_adjust} -eq 0 ] ; then |
---|
| 626 | # Special case : first period and no adjust => Save bands file with suffix _0 |
---|
| 627 | IGCM_sys_Cp Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat ${SUBMIT_DIR}/PARAM/${config_UserChoices_JobName}_Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat_0 |
---|
| 628 | IGCM_sys_Put_Out Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat ${R_OUT_ATM_R}/${config_UserChoices_JobName}_Bands_${RESOL_ATM_3D}_${NUM_PROC_ATM}prc.dat_0 |
---|
| 629 | fi |
---|
[1892] | 630 | fi |
---|
[396] | 631 | |
---|
[1537] | 632 | # Add special treatement for CARBON CYCLE |
---|
[1546] | 633 | if [ X"${lmdz_UserChoices_CARBON_CYCLE}" = X"control" ] || [ X"${lmdz_UserChoices_CARBON_CYCLE}" = X"historical" ] ; then |
---|
[1780] | 634 | ATM_Carbon_Finalize |
---|
| 635 | fi |
---|
[1537] | 636 | |
---|
[1780] | 637 | echo FINALIZE ATM ! |
---|
[1537] | 638 | |
---|
[1780] | 639 | IGCM_debug_PopStack "ATM_Finalize" |
---|
| 640 | } |
---|
[1537] | 641 | |
---|
| 642 | |
---|
| 643 | |
---|
[1780] | 644 | function ATM_Carbon_Update |
---|
| 645 | { |
---|
| 646 | # This fuction will be called only if CARBON_CYCLE is set to control or historical in lmdz.card |
---|
[1537] | 647 | |
---|
[1780] | 648 | IGCM_debug_PushStack "ATM_Carbon_Update" |
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| 649 | |
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| 650 | typeset InitPeriodCo2 InitDateBeginCo2 InitDateEndCo2 |
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| 651 | typeset CO2SBG CO2MBG CO2LU CO2_ppm CO2_ppm_prec fCO2_ff |
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| 652 | typeset PathCO2log |
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| 653 | typeset PreviousLinelog LastPeriodDateBegin LastPeriodDateEnd LastDatesPeriod LastPREFIX |
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| 654 | |
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| 655 | if ( ${FirstInitialize} && [ X"${config_ATM_Restart}" = X"n" ] ) ; then |
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| 656 | ##--Initialization of fluxes to an undefined value at the first run |
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| 657 | UndefinedValueCo2=-9999 |
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| 658 | InitPeriodCo2=0 |
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| 659 | InitDateBeginCo2=${UndefinedValueCo2} |
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| 660 | InitYearCo2=$(( ${year} - 1 )) |
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| 661 | InitDateEndCo2=${InitYearCo2}1231 |
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| 662 | fCO2_ff=${UndefinedValueCo2} |
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| 663 | CO2SBG=${UndefinedValueCo2} |
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| 664 | CO2LU=${UndefinedValueCo2} |
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| 665 | CO2MBG=${UndefinedValueCo2} |
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| 666 | CO2_ppm_prec=${UndefinedValueCo2} |
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| 667 | # Get the initial value of atmosp. pco2 |
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| 668 | CO2_ppm=${lmdz_UserChoices_co2_init} |
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| 669 | |
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| 670 | IGCM_sys_Cp ${SUBMIT_DIR}/co2.log.init ${SUBMIT_DIR}/co2.log |
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| 671 | IGCM_sys_Chmod u+w ${SUBMIT_DIR}/co2.log |
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| 672 | |
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[1537] | 673 | # Save CO2 values in ExeCpuLog variable contents 5 fields |
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[1780] | 674 | echo "${InitPeriodCo2} ${InitDateBeginCo2} ${InitDateEndCo2} ${CO2_ppm} ${CO2_ppm_prec} ${fCO2_ff} ${CO2MBG} ${CO2SBG} ${CO2LU}" | \ |
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[1537] | 675 | gawk '{printf(" %11d | %15s | %15s | %22.15g | %20.15g | %11.8g | %11.8g | %12.8g | %12.8g \n", \ |
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[1780] | 676 | $1,$2,$3,$4,$5,$6,$7,$8,$9)}' >> ${SUBMIT_DIR}/co2.log |
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| 677 | |
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| 678 | # Get the path where the log file co2.log is |
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| 679 | PathCO2log=${SUBMIT_DIR} |
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| 680 | # Get Previous line in co2.log |
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| 681 | PreviousLinelog=$( tail -1 ${PathCO2log}/co2.log ) |
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| 682 | |
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| 683 | else |
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| 684 | |
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| 685 | # NEW parameter in config.card (even for Overule all restarts, you must modify the line after this comment ): |
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| 686 | # !! NEW for Carbone cycle !! Path where to find old co2.log file for restart CO2. |
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| 687 | #SubmitRestartPath= |
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| 688 | if ( ${FirstInitialize} && [ X"${config_ATM_Restart}" = X"y" ] ) ; then |
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| 689 | IGCM_card_DefineVariableFromOption ${SUBMIT_DIR}/config.card ATM SubmitRestartPath |
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| 690 | PathCO2log=${config_ATM_SubmitRestartPath} |
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| 691 | Date_r=$( IGCM_date_ConvertFormatToGregorian ${config_ATM_RestartDate} ) |
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| 692 | PreviousLinelog=$( grep ${Date_r} ${PathCO2log}/co2.log ) |
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| 693 | |
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| 694 | IGCM_sys_Cp ${SUBMIT_DIR}/co2.log.init ${SUBMIT_DIR}/co2.log |
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| 695 | IGCM_sys_Chmod u+w ${SUBMIT_DIR}/co2.log |
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| 696 | |
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| 697 | # Save Last Line of control in new co2.log file |
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| 698 | InitPeriodCo2=0 |
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| 699 | InitDateBeginCo2=$( echo "${PreviousLinelog[*]}" | gawk -F '|' '{gsub(" ",""); print $2}' ) |
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| 700 | InitDateEndCo2=$( echo "${PreviousLinelog[*]}" | gawk -F '|' '{gsub(" ",""); print $3}' ) |
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| 701 | fCO2_ff=$( echo "${PreviousLinelog[*]}" | gawk -F '|' '{gsub(" ",""); print $6}' ) |
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| 702 | CO2SBG=$( echo "${PreviousLinelog[*]}" | gawk -F '|' '{gsub(" ",""); print $8}' ) |
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| 703 | CO2LU=$( echo "${PreviousLinelog[*]}" | gawk -F '|' '{gsub(" ",""); print $9}' ) |
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| 704 | CO2MBG=$( echo "${PreviousLinelog[*]}" | gawk -F '|' '{gsub(" ",""); print $7}' ) |
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| 705 | CO2_ppm_prec=$( echo "${PreviousLinelog[*]}" | gawk -F '|' '{gsub(" ",""); print $5}' ) |
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| 706 | CO2_ppm=$( echo "${PreviousLinelog[*]}" | gawk -F '|' '{gsub(" ",""); print $4}' ) |
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| 707 | |
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| 708 | echo "${InitPeriodCo2} ${InitDateBeginCo2} ${InitDateEndCo2} ${CO2_ppm} ${CO2_ppm_prec} ${fCO2_ff} ${CO2MBG} ${CO2SBG} ${CO2LU}" | \ |
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| 709 | gawk '{printf(" %11d | %15s | %15s | %22.15g | %20.15g | %11.8g | %11.8g | %12.8g | %12.8g \n", \ |
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| 710 | $1,$2,$3,$4,$5,$6,$7,$8,$9)}' >> ${SUBMIT_DIR}/co2.log |
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| 711 | else |
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| 712 | # Get restart line in co2.log |
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| 713 | PathCO2log=${SUBMIT_DIR} |
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| 714 | PreviousLinelog=$( tail -1 ${PathCO2log}/co2.log ) |
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| 715 | # Get the value of atmosp. pco2 in co2.log |
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| 716 | CO2_ppm=$( echo "${PreviousLinelog[*]}" | gawk -F '|' '{gsub(" ",""); print $4}' ) |
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| 717 | fi |
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| 718 | |
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[1537] | 719 | fi |
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[1780] | 720 | |
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| 721 | if [ ${lmdz_UserChoices_CARBON_CYCLE} = historical ] ; then |
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| 722 | # Modify co2_ppm in config.def only for historical run |
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[2343] | 723 | # If not historical run, keep co2_ppm value set earlier by IGCM_comp_modifyDefFile |
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| 724 | IGCM_comp_modifyDefFile nonblocker config.def co2_ppm ${CO2_ppm} |
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[1780] | 725 | fi |
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| 726 | IGCM_debug_PopStack "ATM_Carbon_Update" |
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| 727 | } |
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[1537] | 728 | |
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[396] | 729 | |
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[1780] | 730 | function ATM_Carbon_Finalize |
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| 731 | { |
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| 732 | # This fuction will be called only if CARBON_CYCLE is set to control or historical in lmdz.card |
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| 733 | |
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| 734 | IGCM_debug_PushStack "ATM_Carbon_Finalize" |
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| 735 | |
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| 736 | typeset CO2SBG_3V CO2SBG CO2MBG CO2SRF CO2LU CO2_ppm CO2_ppm_prec fCO2_ff |
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| 737 | |
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| 738 | # Fossil fuel emission |
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| 739 | if [ ${lmdz_UserChoices_CARBON_CYCLE} = control ] ; then |
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| 740 | # For Control, no fossil fuel emission : |
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| 741 | fCO2_ff=0 |
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| 742 | echo "Fossil Fuel for control run :" ${fCO2_ff} |
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| 743 | else |
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| 744 | # For historical, get the fossile fuel file : |
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| 745 | fCO2_ff=$( gawk "{if (match(\$0,\"${year}\ *${month}\")) {print \$3}}" ${SUBMIT_DIR}/PARAM/CMIP5_gridcar_CO2_emissions_fossil_fuel_Andres_1751-2007_monthly_SC.txt ) |
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| 746 | echo "Fossil Fuel for historical run :" ${fCO2_ff} |
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| 747 | fi |
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| 748 | |
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| 749 | # Get the value of ocean carbon flux |
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| 750 | CO2MBG=$( ${SUBMIT_DIR}/COMP/lmdz_analyse_pisces_out.awk ocean.output ) |
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| 751 | CO2MBG=$( echo ${CO2MBG} | sed -e "s/ *//" ) |
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| 752 | echo "Ocean carbon flux :" ${CO2MBG} |
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| 753 | |
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| 754 | # Get the value of land fluxes |
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| 755 | set +A CO2SBG_3V -- $( ${SUBMIT_DIR}/COMP/lmdz_analyse_stomate_out.awk out_orchidee_0000 ) |
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| 756 | CO2SRF=$( echo ${CO2SBG_3V[0]} | sed -e "s/ *//" ) |
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| 757 | CO2LU=$( echo ${CO2SBG_3V[1]} | sed -e "s/ *//" ) |
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| 758 | CO2SBG=$( echo ${CO2SBG_3V[2]} | sed -e "s/ *//" ) |
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| 759 | echo "Land carbon flux (NEP) :" ${CO2SRF} |
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| 760 | echo "LU flux (FLUC) :" ${CO2LU} |
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| 761 | echo "Total Land carbon flux (NBP) :" ${CO2SBG} |
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| 762 | |
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| 763 | # Previous CO2 |
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| 764 | CO2_ppm_prec=$( echo "${PreviousLinelog[*]}" | gawk -F '|' '{gsub(" ",""); print $4}' ) |
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| 765 | echo "Previous CO2 :" ${CO2_ppm_prec} |
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| 766 | |
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| 767 | # Formula |
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| 768 | CO2_ppm=$( echo "${CO2_ppm_prec} + (${fCO2_ff} + ${CO2MBG} + ${CO2SBG}) / 2.12" | bc -l ) |
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| 769 | echo "New CO2 :" ${CO2_ppm} |
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| 770 | |
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| 771 | # Save CO2 values in ExeCpuLog variable contents 5 fields |
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| 772 | echo "${CumulPeriod} ${PeriodDateBegin} ${PeriodDateEnd} ${CO2_ppm} ${CO2_ppm_prec} ${fCO2_ff} ${CO2MBG} ${CO2SBG} ${CO2LU}" | \ |
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| 773 | gawk '{printf(" %11d | %15s | %15s | %22.15g | %20.15g | %11.8g | %11.8g | %12.8g | %12.8g \n", \ |
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| 774 | $1,$2,$3,$4,$5,$6,$7,$8,$9)}' >> ${SUBMIT_DIR}/co2.log |
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| 775 | |
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| 776 | IGCM_debug_PopStack "ATM_Carbon_Finalize" |
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[396] | 777 | } |
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