1 | !!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> |
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2 | !! PISCES : Configuration namelist : used to overwrite defaults values defined in SHARED/namelist_pis_ref |
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3 | !>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> |
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4 | !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' |
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5 | &nampisext ! air-sea exchange |
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6 | !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, |
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7 | atcco2 = _AUTO_: DEFAULT=287. ! Constant value atmospheric pCO2 - ln_co2int = F |
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8 | atcn2o = _AUTO_: DEFAULT=280. ! Constant value atmospheric pN2O (ppb) |
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9 | / |
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10 | !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' |
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11 | &nampisatm ! Atmospheric pressure |
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12 | !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, |
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13 | ln_presatm = .false. ! constant atmopsheric pressure (F) or from a file (T) |
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14 | / |
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15 | !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' |
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16 | &nampisbio ! biological parameters |
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17 | !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, |
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18 | alphan2o = 1.5e-4 ! Nitrification coefficient for n2o |
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19 | betan2o = 120.e-4 ! Denitrification coefficient for n2o |
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20 | xlow = 1.0 ! Lower boundary of suboxia for N2O production |
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21 | xhigh = 5.0 ! Upper boundary of suboxia for N2O production |
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22 | sinkn2o = 4.1e-4 ! N2O sink term coefficient |
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23 | / |
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24 | !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' |
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25 | &nampislim ! parameters for nutrient limitations |
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26 | !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, |
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27 | xkdms = 1.25E-9 ! DMS half saturation for bacterial loss = 1.25E-9 |
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28 | xscdiat = 0.0018 ! S/C ratio for diatoms = 0.0018 |
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29 | xscnanom = 0.015 ! min S/C ratio for nano = 0.015 |
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30 | xscnanov = 0.015 ! var S/C ratio for nano = 0.015 |
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31 | xysvar = 0.5 ! DMSP-to-DMS yield var = 0.2 |
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32 | xysmin = 0.1 ! DMSP-to-DMS yield min = 0.4 |
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33 | xknfer = 1.e-11 ! DMS FER half saturation for nano = 2.e-11 |
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34 | xkdfer = 0.5e-10 ! DMS FER half saturation for diatoms = 1.e-10 |
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35 | xkdocdms = 5.e-6 ! DMS DOC half saturation = 5.e-6 |
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36 | xknpo4 = 2.e-7 ! DMS PO4 half saturation for nano = 1.e-7 |
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37 | xkdpo4 = 10.e-7 ! DMS PO4 half saturation for diatoms = 5.e-7 |
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38 | / |
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39 | !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' |
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40 | &nampisopt ! parameters for optics |
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41 | !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, |
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42 | ! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! |
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43 | ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! |
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44 | sn_par = 'par_fraction_gewex_clim90s00s_eORCA_R1.nc', 24 , 'fr_par' , .true. , .true. , 'yearly' , '' , '' , '' |
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45 | ln_varpar = .true. ! boolean for PAR variable |
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46 | / |
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47 | !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' |
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48 | &nampisprod ! parameters for phytoplankton growth |
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49 | !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, |
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50 | / |
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51 | !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' |
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52 | &nampismort ! parameters for phytoplankton sinks |
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53 | !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, |
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54 | / |
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55 | !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' |
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56 | &nampismes ! parameters for mesozooplankton |
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57 | !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, |
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58 | / |
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59 | !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' |
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60 | &nampiszoo ! parameters for microzooplankton |
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61 | !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, |
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62 | / |
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63 | !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' |
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64 | &nampisfer ! parameters for iron chemistry |
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65 | !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, |
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66 | / |
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67 | !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' |
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68 | &nampisrem ! parameters for remineralization |
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69 | !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, |
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70 | xlightdms = 0.05 !: photodegradation rate constant of DMS |
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71 | xsinkdms = 0.4 !: microbial degradation rate of DMS |
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72 | xvsinkdms = 1. !: microbial degradation rate of DMS VOGT |
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73 | / |
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74 | !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' |
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75 | &nampiscal ! parameters for Calcite chemistry |
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76 | !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, |
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77 | / |
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78 | !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' |
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79 | &nampissbc ! parameters for inputs deposition |
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80 | !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, |
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81 | ! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! |
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82 | ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! |
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83 | ! |
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84 | sn_dust = 'dust.orca.nc' , -1 , 'dust' , .true. , .true. , 'yearly' , 'weights_lmd144142_bilin.nc', '' , '' |
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85 | sn_solub = 'Solubility_T62_Mahowald_eORCA_R1.nc', -12 , 'solubility2' , .false. , .true. , 'yearly' , '' , '' , '' |
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86 | sn_riverdic = 'river_global_news_eORCA_R1.nc' , -1 , 'riverdic' , .true. , .true. , 'yearly' , '' , '' , '' |
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87 | sn_riverdoc = 'river_global_news_eORCA_R1.nc' , -1 , 'riverdoc' , .true. , .true. , 'yearly' , '' , '' , '' |
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88 | sn_riverdin = 'river_global_news_eORCA_R1.nc' , -1 , 'riverdin' , .true. , .true. , 'yearly' , '' , '' , '' |
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89 | sn_riverdon = 'river_global_news_eORCA_R1.nc' , -1 , 'riverdon' , .true. , .true. , 'yearly' , '' , '' , '' |
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90 | sn_riverdip = 'river_global_news_eORCA_R1.nc' , -1 , 'riverdip' , .true. , .true. , 'yearly' , '' , '' , '' |
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91 | sn_riverdop = 'river_global_news_eORCA_R1.nc' , -1 , 'riverdop' , .true. , .true. , 'yearly' , '' , '' , '' |
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92 | sn_riverdsi = 'river_global_news_eORCA_R1.nc' , -1 , 'riverdsi' , .true. , .true. , 'yearly' , '' , '' , '' |
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93 | sn_ndepo = 'ndeposition.orca.nc' , -1 , 'ndep' , .true. , .true. , 'yearly' , 'weights_2d_bilin.nc', '' , '' |
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94 | sn_ironsed = 'pmarge_etopo_eORCA_R1.nc' , -12 , 'bathy' , .false. , .true. , 'yearly' , '' , '' , '' |
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95 | cn_dir = './' ! root directory for the location of the dynamical files |
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96 | ln_dust = .true. ! boolean for dust input from the atmosphere |
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97 | ln_solub = .true. ! boolean for variable solubility of atm. Iron |
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98 | ln_river = .true. ! boolean for river input of nutrients |
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99 | ln_ndepo = .true. ! boolean for atmospheric deposition of N |
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100 | ln_ironsed = .true. ! boolean for Fe input from sediments |
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101 | ln_ironice = .true. ! boolean for Fe input from sea ice |
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102 | ln_nitrfix_old = .false. ! boolean for old nitrigen fixation parametrisation |
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103 | sedfeinput = 1.e-9 ! Coastal release of Iron |
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104 | nitrfix = 1.4e-7 ! Nitrogen fixation rate |
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105 | / |
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106 | !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' |
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107 | &nampisdmp ! Damping |
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108 | !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, |
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109 | ln_pisdmp = .true. ! No relaxation for PISCES passive tracers |
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110 | nn_pisdmp = _AUTO_: DEFAULT=8760 ! Frequency of Relaxation |
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111 | / |
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112 | !''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' |
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113 | &nampismass ! Mass conservation |
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114 | !,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, |
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115 | / |
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