#!/bin/bash ## Request name #MSUB -r DYN_bench #MSUB -E '--exclude=irene[1325-1346]' ## Number of tasks (=MPI processes) to use #MSUB -n NUM_MPI ## Number of OpenMP threads #MSUB -c NUM_OMP ## Elapsed time limit in seconds #MSUB -T 1800 # account, partition (Xeon/KNL) #MSUB -A gen0239 #MSUB -q skylake # Mount on compute node #MSUB -m work function run_standard() { date > gcm.log ccc_mprun /ccc/work/cont003/gen7548/dubosth/IRENE/testing/build_mpi_omp/bin/icosa_gcm.exe >> gcm.log date >> gcm.log } function run_mpmd() { ln -s dynamico.0000.out gcm.log ccc_mprun -f mpmd.conf } function run_hmpmd() { module load feature/bridge/heterogenous_mpmd ln -s dynamico.0000.out gcm.log ccc_mprun -f hmpmd.conf } cd ${BRIDGE_MSUB_PWD} source /ccc/work/cont003/gen7548/dubosth/IRENE/testing/build_mpi_omp/arch.env module load ipm export IPM_REPORT=full export OMP_NUM_THREADS=$BRIDGE_MSUB_NCORE export OMP_STACKSIZE=128M rm -rf dynamico.* gcm.log logs *.nc netcdf ulimit -s unlimited #run_standard run_mpmd #run_hmpmd grep MAIN gcm.log tail -n 50 gcm.log mkdir -p netcdf cp gcm.log *.def netcdf mv *.nc netcdf mkdir -p logs cp *.xml logs cp -pr /ccc/work/cont003/gen7548/dubosth/IRENE/testing/build_mpi_omp/bin/icosa_gcm.exe logs cp -pr /ccc/work/cont003/gen7548/dubosth/IRENE/testing/DYNAMICO_trunk/src logs mv gcm.log xios_client_*.err xios_client_*.out dynamico.* logs touch already_done