| 1 | function xml_iodef() { |
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| 2 | cat <<EOF |
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| 3 | <?xml version="1.0"?> |
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| 4 | <simulation> |
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| 5 | <context id="xios"> |
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| 6 | <variable_definition> |
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| 7 | <variable id="print_file" type="bool"> true </variable> |
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| 8 | <variable_group id="buffer"> |
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| 9 | </variable_group> |
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| 10 | |
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| 11 | <variable_group id="parameters" > |
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| 12 | <variable id="using_server" type="bool">false</variable> |
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| 13 | <variable id="info_level" type="int">1</variable> |
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| 14 | </variable_group> |
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| 15 | </variable_definition> |
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| 16 | </context> |
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| 17 | <context id="icosagcm" src="./icosa.xml" /> |
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| 18 | </simulation> |
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| 19 | EOF |
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| 20 | } |
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| 21 | |
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| 22 | function xml_icosa() { |
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| 23 | cat <<EOF |
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| 24 | <context id="icosagcm" > |
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| 25 | <calendar type="d360" start_date="2000-01-01 00:00:00" time_origin="2000-01-01 00:00:00"/> |
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| 26 | |
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| 27 | <field_definition src="./field_def.xml" /> |
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| 28 | |
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| 29 | <file_definition src="./filedef_dcmip2016.xml" /> |
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| 30 | |
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| 31 | <file_definition type="one_file" par_access="collective"> |
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| 32 | |
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| 33 | <file id="output" name="output" enabled=".FALSE." output_freq="2h" sync_freq="2h" output_level="10" > |
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| 34 | <field_group group_ref="standard_output"/> |
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| 35 | </file> |
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| 36 | |
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| 37 | <file id="restart" name="restart" enabled="true"> |
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| 38 | <field_group id="group_restart" operation="once"> |
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| 39 | <field id="it_restart" name="iteration" grid_ref="scalar" /> |
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| 40 | <field id="q_restart" name="q" grid_ref="grid_q" /> |
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| 41 | <field_group domain_ref="i"> |
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| 42 | <field id="ps_restart" name="ps" /> |
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| 43 | <field id="phis_restart" name="phis" /> |
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| 44 | <field_group axis_ref="lev" > |
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| 45 | <field id="theta_rhodz_restart" name="theta_rhodz" /> |
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| 46 | <field id="u_restart" name="u" domain_ref="u"/> |
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| 47 | <field id="ulon_restart" name="ulon" /> |
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| 48 | <field id="ulat_restart" name="ulat" /> |
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| 49 | </field_group> |
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| 50 | <field_group axis_ref="levp1" > |
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| 51 | <field id="W_restart" name="W" /> |
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| 52 | <field id="geopot_restart" name="geopot" /> |
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| 53 | </field_group> |
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| 54 | </field_group> |
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| 55 | </field_group> |
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| 56 | </file> |
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| 57 | |
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| 58 | <file id="start" name="start" enabled="false" mode="read"> |
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| 59 | <field_group id="group_start" operation="once"> |
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| 60 | <field id="it_start" name="iteration" grid_ref="scalar" enabled="false"/> |
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| 61 | <field id="q_start" name="q" grid_ref="grid_q_read" /> |
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| 62 | <field_group domain_ref="i"> |
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| 63 | <field id="ps_start" name="ps" /> |
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| 64 | <field id="phis_start" name="phis" /> |
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| 65 | <field_group axis_ref="lev_read" > |
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| 66 | <field id="theta_rhodz_start" name="theta_rhodz" /> |
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| 67 | <field id="u_start" name="u" domain_ref="u"/> |
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| 68 | <field id="ulon_start" name="ulon" /> |
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| 69 | <field id="ulat_start" name="ulat" /> |
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| 70 | </field_group> |
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| 71 | <field_group axis_ref="levp1" > |
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| 72 | <field id="W_start" name="W" /> |
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| 73 | <field id="geopot_start" name="geopot" /> |
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| 74 | </field_group> |
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| 75 | </field_group> |
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| 76 | </field_group> |
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| 77 | </file> |
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| 78 | |
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| 79 | |
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| 80 | </file_definition> |
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| 81 | |
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| 82 | <axis_definition> |
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| 83 | <axis id="lev" name="lev" positive="down" standard_name="atmopshere_hybrid_sigma_pressure_coordinate" long_name="hybrid level at midpoints" /> |
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| 84 | <axis id="lev_read" /> |
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| 85 | <axis id="levp1" name="ilev" unit="level" positive="down" standard_name="atmopshere_hybride_sigma_pressure_coordinate" long_name="hybrid level at interface" /> |
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| 86 | <axis id="lev_pressure" positive="down" n_glo="2" unit="Pa" value="(0,1)[85000 50000]" > |
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| 87 | <interpolate_axis order="1" coordinate="p" /> |
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| 88 | </axis> |
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| 89 | <axis id="nq" name="nq" n_glo="5" value="(0,4)[1 2 3 4 5]"/> |
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| 90 | </axis_definition> |
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| 91 | |
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| 92 | <domain_definition> |
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| 93 | |
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| 94 | <domain_group id="i"> |
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| 95 | <domain id="i" name="mesh"/> |
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| 96 | </domain_group> |
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| 97 | |
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| 98 | |
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| 99 | <domain id="v" /> |
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| 100 | <domain id="u" /> |
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| 101 | |
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| 102 | <domain id="regular_half_degree" type="rectilinear" ni_glo="720" nj_glo="360" > |
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| 103 | <generate_rectilinear_domain /> |
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| 104 | <interpolate_domain order="1"/> |
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| 105 | </domain> |
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| 106 | |
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| 107 | <domain id="regular_one_degree" type="rectilinear" ni_glo="360" nj_glo="180" > |
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| 108 | <generate_rectilinear_domain /> |
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| 109 | <interpolate_domain order="1"/> |
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| 110 | </domain> |
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| 111 | |
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| 112 | <domain id="regular_two_degree" type="rectilinear" ni_glo="180" nj_glo="90" > |
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| 113 | <generate_rectilinear_domain /> |
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| 114 | <interpolate_domain order="1"/> |
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| 115 | </domain> |
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| 116 | |
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| 117 | </domain_definition> |
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| 118 | |
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| 119 | <grid_definition> |
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| 120 | <grid id="scalar"> |
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| 121 | <scalar /> |
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| 122 | </grid> |
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| 123 | |
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| 124 | <grid id="grid_q"> |
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| 125 | <domain domain_ref="i" /> |
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| 126 | <axis axis_ref="lev" /> |
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| 127 | <axis axis_ref="nq" /> |
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| 128 | </grid > |
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| 129 | |
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| 130 | <grid id="grid_q_read"> |
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| 131 | <domain domain_ref="i" /> |
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| 132 | <axis axis_ref="lev_read" /> |
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| 133 | <axis axis_ref="nq" /> |
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| 134 | </grid > |
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| 135 | |
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| 136 | <grid id="grid_q_regular"> |
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| 137 | <domain domain_ref="regular_two_degree" /> |
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| 138 | <axis axis_ref="lev" /> |
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| 139 | <axis axis_ref="nq" /> |
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| 140 | </grid > |
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| 141 | </grid_definition> |
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| 142 | |
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| 143 | </context> |
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| 144 | EOF |
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| 145 | } |
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| 146 | |
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| 147 | function xml_field_def() { |
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| 148 | cat <<EOF |
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| 149 | <field_definition level="1" enabled=".TRUE." operation="instant"> |
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| 150 | |
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| 151 | <field_group id="standard_output"> |
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| 152 | |
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| 153 | <field id="timestep" grid_ref="scalar" unit="s"/> |
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| 154 | <field id="preff" grid_ref="scalar" unit="Pa"/> |
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| 155 | <field id="ap" axis_ref="levp1" long_name="hybrid A coefficient at layer interface" /> |
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| 156 | <field id="bp" axis_ref="levp1" long_name="hybrid B coefficient at layer interface" /> |
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| 157 | <field id="mid_ap" axis_ref="lev" long_name="hybrid A coefficient at midpoints" /> |
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| 158 | <field id="mid_bp" axis_ref="lev" long_name="hybrid B coefficient at midpoints" /> |
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| 159 | |
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| 160 | <field_group domain_ref="i"> |
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| 161 | <field id="ps" /> |
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| 162 | <field id="dps" /> |
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| 163 | <field id="Ai" /> |
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| 164 | <field id="phis" /> |
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| 165 | <field id="phi" /> |
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| 166 | <field id="precl" /> |
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| 167 | <field id="Q1_col_int" /> |
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| 168 | <field id="Q2_col_int" /> |
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| 169 | <field id="ps_init" /> |
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| 170 | |
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| 171 | <field_group axis_ref="lev"> |
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| 172 | <field id="mass" /> |
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| 173 | <field id="p" /> |
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| 174 | <field id="dmass"/> |
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| 175 | <field id="theta" /> |
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| 176 | <field id="dyn_q" /> |
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| 177 | <field id="pk"/> |
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| 178 | <field id="ulon"/> |
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| 179 | <field id="ulat"/> |
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| 180 | <field id="uz"/> |
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| 181 | <field id="omega"/> |
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| 182 | <field id="temp"/> |
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| 183 | |
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| 184 | <field id="kinetic_trisk" /> |
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| 185 | <field id="kinetic" /> |
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| 186 | |
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| 187 | <field id="mass_init" /> |
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| 188 | <field id="p_init" /> |
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| 189 | <field id="theta_init" /> |
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| 190 | <field id="dyn_q_init" /> |
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| 191 | <field id="ulon_init"/> |
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| 192 | <field id="ulat_init"/> |
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| 193 | <field id="uz_init"/> |
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| 194 | <field id="temp_init"/> |
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| 195 | |
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| 196 | <field id="kinetic_trisk_init" /> |
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| 197 | <field id="kinetic_init" /> |
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| 198 | |
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| 199 | <field id="mass_t" long_name="Time-averaged air mass" unit="kg/m2"/> |
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| 200 | <field id="massflux_lon" long_name="Time-averaged air mass flux, zonal" unit="kg/m/s"/> |
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| 201 | <field id="massflux_lat" long_name="Time-averaged air mass flux, meridional" unit="kg/m/s"/> |
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| 202 | |
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| 203 | <field id="ulon_t" long_name="Time-averaged zonal momentum" unit="kg/m/s"/> |
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| 204 | <field id="ulonflux_lon" long_name="Time-averaged zonal momentum flux, zonal" unit="kg/s2"/> |
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| 205 | <field id="ulonflux_lat" long_name="Time-averaged zonal momentum flux, meridional" unit="kg/s2"/> |
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| 206 | |
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| 207 | <field id="theta_t" long_name="Time-averaged potential temperature" unit="K.kg/m2"/> |
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| 208 | <field id="thetaflux_lon" long_name="Time-averaged potential temperature flux, zonal" unit="K.kg/m/s"/> |
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| 209 | <field id="thetaflux_lat" long_name="Time-averaged potential temperature flux, meridional" unit="K/kg/m/s"/> |
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| 210 | |
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| 211 | <field id="epot_t" long_name="Time-averaged potential energy" unit="J/m2"/> |
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| 212 | <field id="epotflux_lon" long_name="Time-averaged potential energy flux, zonal" unit="J/m/s"/> |
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| 213 | <field id="epotflux_lat" long_name="Time-averaged potential energy flux, meridional" unit="J/m/s"/> |
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| 214 | |
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| 215 | <field id="ekin_t" long_name="Time-averaged kinetic energy" unit="J/m2"/> |
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| 216 | <field id="ekinflux_lon" long_name="Time-averaged kinetic energy flux, zonal" unit="J/m/s"/> |
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| 217 | <field id="ekinflux_lat" long_name="Time-averaged kinetic energy flux, meridional" unit="J/m/s"/> |
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| 218 | |
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| 219 | <field id="enthalpy_t" long_name="Time-averaged enthalpy" unit="J/m2"/> |
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| 220 | <field id="enthalpyflux_lon" long_name="Time-averaged enthalpy flux, zonal" unit="J/m/s"/> |
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| 221 | <field id="enthalpyflux_lat" long_name="Time-averaged enthalpy flux, meridional" unit="J/m/s"/> |
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| 222 | |
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| 223 | <field id="dulon_diss1"/> |
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| 224 | <field id="dulon_diss2"/> |
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| 225 | <field id="dulat_diss1"/> |
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| 226 | <field id="dulat_diss2"/> |
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| 227 | |
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| 228 | <field id="dulon_phys" long_name="Physics tendency for zonal velocity" unit="m/s^2"/> |
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| 229 | <field id="dulat_phys" long_name="Physics tendency for meridional velocity" unit="m/s^2"/> |
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| 230 | |
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| 231 | </field_group> |
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| 232 | |
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| 233 | <field id="u850" /> |
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| 234 | <field id="v850" /> |
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| 235 | <field id="w850" /> |
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| 236 | <field id="t850" /> |
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| 237 | <field id="omega850"/> |
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| 238 | <field id="u500" /> |
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| 239 | <field id="v500" /> |
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| 240 | <field id="w500" /> |
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| 241 | <field id="t500" /> |
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| 242 | <field id="omega500"/> |
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| 243 | <field id="SST"/> |
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| 244 | |
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| 245 | <field id="ulon_850_500" field_ref="p" axis_ref="lev_pressure" /> |
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| 246 | |
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| 247 | <field_group axis_ref="levp1"> |
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| 248 | <field id="geopot"/> |
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| 249 | <field id="geopot_init"/> |
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| 250 | </field_group> |
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| 251 | </field_group> |
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| 252 | |
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| 253 | <field_group grid_ref="grid_q"> |
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| 254 | <field id="q_init" /> |
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| 255 | <field id="q" /> |
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| 256 | <field id="qmass_t" /> |
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| 257 | <field id="qflux_lon" /> |
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| 258 | <field id="qflux_lat" /> |
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| 259 | </field_group> |
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| 260 | |
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| 261 | <field_group domain_ref="v" axis_ref="lev"> |
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| 262 | <field id="vort" /> |
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| 263 | <field id="pv" /> |
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| 264 | </field_group> |
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| 265 | |
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| 266 | </field_group> |
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| 267 | |
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| 268 | |
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| 269 | </field_definition> |
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| 270 | |
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| 271 | EOF |
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| 272 | } |
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| 273 | |
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| 274 | function xml_dcmip() { # EXPNAME OUTPUT_GRID OUTPUT_FREQ |
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| 275 | EXPNAME=$1 |
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| 276 | OUTPUT_GRID=$2 |
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| 277 | OUTPUT_FREQ=$3 |
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| 278 | NBP=80 # FIXME |
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| 279 | LLM=10 # FIXME |
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| 280 | cat <<EOF |
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| 281 | <file_definition > |
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| 282 | |
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| 283 | <file id="output_dcmip2016_native" convention="CF" enabled="false" output_freq="$OUTPUT_FREQ" sync_freq="$OUTPUT_FREQ" output_level="10" timeseries="none" description="$EXPNAME" > |
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| 284 | |
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| 285 | <!-- FIXME |
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| 286 | <field_group id="dcmip2016_output_field_once" operation="once" freq_offset="0ts" ts_enabled="true"> |
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| 287 | <field field_ref="timestep" name="mdt" /> |
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| 288 | <field field_ref="preff" name="P0" long_name="reference pressure" /> |
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| 289 | <field field_ref="ap" name="hyai" /> |
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| 290 | <field field_ref="bp" name="hybi" /> |
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| 291 | <field field_ref="mid_ap" name="hyam" /> |
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| 292 | <field field_ref="mid_bp" name="hybm" /> |
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| 293 | </field_group> |
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| 294 | --> |
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| 295 | |
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| 296 | <field_group id="init_fields" operation="once" freq_offset="0ts" ts_enabled="true"> |
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| 297 | <field field_ref="temp_init" /> |
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| 298 | <field field_ref="uz_init" /> |
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| 299 | <field field_ref="ulon_init" /> |
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| 300 | <field field_ref="ulat_init" /> |
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| 301 | <field field_ref="p_init" /> |
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| 302 | <field field_ref="ps_init" /> |
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| 303 | <field field_ref="mass_init" /> |
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| 304 | <field field_ref="geopot_init" /> |
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| 305 | </field_group> |
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| 306 | |
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| 307 | <field_group id="dcmip2016_output_field" ts_enabled="true"> |
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| 308 | <field field_ref="ps" name="PS" standard_name="surface_pressure" long_name="Surface pressure" unit="Pa" /> |
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| 309 | <field field_ref="phis" operation="once" freq_offset="0ts" name="PHIS" standard_name="surface_geopotential" long_name="Surface geopotential" unit="m2/m2"/> |
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| 310 | <field field_ref="geopot" name="PHI" standard_name="geopotential" long_name="geopotential" unit="m2/s2"/> |
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| 311 | <field field_ref="ulon" name="U" standard_name="eastward_wind" long_name="Zonal wind" unit="m/s"/> |
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| 312 | <field field_ref="ulat" name="V" standard_name="northward_wind" long_name="Meridional wind" unit="m/s"/> |
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| 313 | <field field_ref="uz" name="W" standard_name="upward_air_velocity" long_name="Vertical velocity" unit="m/s"/> |
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| 314 | <field field_ref="omega" name="OMEGA" standard_name="lagrangian_tendency_of_air_pressure" long_name="Vertical pressure velocity" unit="Pa/s"/> |
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| 315 | <field field_ref="p" name="P" standard_name="air_pressure" long_name="Pressure" unit="Pa"/> |
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| 316 | <field field_ref="temp" name="T" standard_name="air_temperature" long_name="Temperature" unit="K"/> |
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| 317 | <field field_ref="kinetic_trisk" /> |
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| 318 | <field field_ref="kinetic" /> |
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| 319 | |
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| 320 | <field field_ref="precl" name="PRECT" standard_name="rainfall_rate" long_name="Large Scale precipitation rate" unit="m/s"/> |
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| 321 | <field field_ref="Q1_col_int" name="Q1_col_int" long_name="Single chlorine column integrated mixing ratio" unit="kg/m2"/> |
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| 322 | <field field_ref="Q2_col_int" name="Q2_col_int" long_name="Chlorine gas column integrated mixing ratio" unit="kg/m2"/> |
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| 323 | <field field_ref="u850" name="U850" long_name="Zonal wind at 850 hPa" unit="m/s"/> |
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| 324 | <field field_ref="v850" name="V850" long_name="Meridional wind at 850 hPa" unit="m/s"/> |
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| 325 | <field field_ref="w850" name="W850" long_name="Vertical velocity at 850 hPa" unit="m/s"/> |
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| 326 | <field field_ref="t850" name="T850" long_name="Temperature at 850 hPa" unit="K"/> |
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| 327 | <field field_ref="omega850" name="OMEGA850" long_name="Vertical pressure velocity at 850 hPa" unit="Pa/s"/> |
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| 328 | <field field_ref="u500" name="U500" long_name="Zonal wind at 500 hPa" unit="m/s"/> |
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| 329 | <field field_ref="v500" name="V500" long_name="Meridional wind at 850 hPa" unit="m/s"/> |
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| 330 | <field field_ref="w850" name="W500" long_name="Vertical velocity at 500 hPa" unit="m/s"/> |
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| 331 | <field field_ref="t500" name="T500" long_name="Temperature at 850 hPa" unit="K"/> |
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| 332 | <field field_ref="omega500" name="OMEGA500" long_name="Vertical pressure velocity at 500 hPa" unit="Pa/s"/> |
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| 333 | <field field_ref="SST" name="SST" long_name="Sea surface temperature" unit="K"/> |
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| 334 | |
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| 335 | <field field_ref="mass_t" name="mass_t" long_name="Time-averaged air mass" unit="kg/m2"/> |
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| 336 | <field field_ref="massflux_lon" name="massflux_lon" long_name="Time-averaged air mass flux, zonal" unit="kg/m/s"/> |
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| 337 | <field field_ref="massflux_lat" name="massflux_lat" long_name="Time-averaged air mass flux, meridional" unit="kg/m/s"/> |
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| 338 | |
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| 339 | <field field_ref="epot_t" name="epot_t" long_name="Time-averaged potential energ" unit="J/m2"/> |
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| 340 | <field field_ref="epotflux_lon" name="epotflux_lon" long_name="Time-averaged potential energy flux, zonal" unit="J/m/s"/> |
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| 341 | <field field_ref="epotflux_lat" name="epotflux_lat" long_name="Time-averaged potential energy flux, meridional" unit="J/m/s"/> |
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| 342 | |
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| 343 | <field field_ref="ekin_t" name="ekin_t" long_name="Time-averaged kinetic energ" unit="J/m2"/> |
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| 344 | <field field_ref="ekinflux_lon" name="ekinflux_lon" long_name="Time-averaged kinetic energy flux, zonal" unit="J/m/s"/> |
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| 345 | <field field_ref="ekinflux_lat" name="ekinflux_lat" long_name="Time-averaged kinetic energy flux, meridional" unit="J/m/s"/> |
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| 346 | |
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| 347 | <field field_ref="enthalpy_t" name="enthalpy_t" long_name="Time-averaged enthalpy" unit="J/m2"/> |
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| 348 | <field field_ref="enthalpyflux_lon" name="enthalpyflux_lon" long_name="Time-averaged enthalpy flux, zonal" unit="J/m/s"/> |
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| 349 | <field field_ref="enthalpyflux_lat" name="enthalpyflux_lat" long_name="Time-averaged enthalpy flux, meridional" unit="J/m/s"/> |
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| 350 | |
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| 351 | </field_group> |
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| 352 | |
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| 353 | <variable name="model" type="string" > dynamico </variable> |
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| 354 | <variable name="test_case" type="string" > $EXPNAME </variable> |
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| 355 | <variable name="horizontal_resolution" type="string" > native (grid points : 80x80x10) </variable> |
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| 356 | <variable name="levels" type="string" > L10 </variable> |
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| 357 | <variable name="grid" type="string" > hex </variable> |
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| 358 | <variable name="equation" type="string" > hydro </variable> |
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| 359 | <variable name="time_frequency" type="string" > $OUTPUT_FREQ </variable> |
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| 360 | |
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| 361 | </file> |
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| 362 | |
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| 363 | |
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| 364 | <file id="output_dcmip2016_regular" enabled="true" output_freq="$OUTPUT_FREQ" sync_freq="$OUTPUT_FREQ" output_level="10" description="$EXPNAME" timeseries="none" > |
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| 365 | |
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| 366 | <!-- FIXME |
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| 367 | <field_group group_ref="dcmip2016_output_field_once"/> |
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| 368 | --> |
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| 369 | <field_group group_ref="init_fields" domain_ref="regular_$OUTPUT_GRID" /> |
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| 370 | |
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| 371 | <field_group group_ref="dcmip2016_output_field" domain_ref="regular_$OUTPUT_GRID" /> |
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| 372 | |
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| 373 | <field_group id="transport" ts_enabled="true" grid_ref="grid_q_regular" > |
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| 374 | <field field_ref="q" name="q" /> |
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| 375 | <field field_ref="qmass_t" name="qmass_t" long_name="Time-averaged tracer mass" unit="kg/m2"/> |
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| 376 | <field field_ref="qflux_lon" name="qflux_lon" long_name="Time-averaged tracer mass flux, zonal" unit="kg/m/s"/> |
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| 377 | <field field_ref="qflux_lat" name="qflux_lat" long_name="Time-averaged tracer mass flux, meridional" unit="kg/m/s"/> |
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| 378 | </field_group> |
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| 379 | |
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| 380 | <variable name="model" type="string" > dynamico </variable> |
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| 381 | <variable name="test_case" type="string" > $EXPNAME </variable> |
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| 382 | <variable name="horizontal_resolution" type="string" > $OUTPUT_GRID interpolated (grid points : $NBP x $NBP x $LLM) </variable> |
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| 383 | <variable name="levels" type="string" > L30 </variable> |
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| 384 | <variable name="grid" type="string" > hex </variable> |
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| 385 | <variable name="equation" type="string" > hydro </variable> |
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| 386 | <variable name="time_frequency" type="string" > $OUTPUT_FREQ </variable> |
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| 387 | |
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| 388 | </file> |
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| 389 | |
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| 390 | |
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| 391 | </file_definition> |
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| 392 | EOF |
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| 393 | } |
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