[502] | 1 | #!/bin/bash |
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| 2 | |
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| 3 | #################################### Site-specific functions ####################### |
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| 4 | # In order to accomodate various computing environments, testing.sh relies on the following |
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| 5 | # site-specific functions which must be provided by include_site.sh |
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| 6 | # |
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| 7 | # submit_run_and_post EXP |
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| 8 | # Submit the run job run.job to the batch scheduler |
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| 9 | # Submit the post-processing job post.job to the batch scheduler |
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| 10 | # so that it starts after successful completion of run.job |
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| 11 | # |
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| 12 | # qstat |
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| 13 | # Display cluster status : jobs running, waiting, ect. |
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| 14 | # |
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| 15 | # print_run_job() |
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| 16 | # Print run.job on standard output |
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| 17 | # Standard output is redirected to run.job by caller |
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| 18 | # |
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| 19 | # print_post_job() |
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| 20 | # Print beginning of post.job on standard output. The caller will print additional lines depending on the test case. |
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| 21 | # Standard output is redirected to file post.job by caller |
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| 22 | # Script post.job must source include_site.sh, include_post.sh |
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| 23 | # and either include_post_xios.sh or include_post_noxios.sh . |
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| 24 | # These two scripts define functions suitable for output produced with/without XIOS |
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| 25 | # These functions are called at the end of post.job, in the test-case-dependent part appended by the caller |
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| 26 | # These functions call wrapper functions NCKS and CDO which must also be defined in include_site.sh |
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| 27 | |
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| 28 | ################################ Helper functions ############################## |
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| 29 | |
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| 30 | function redef() |
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| 31 | { |
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| 32 | while (($# > 0)) ; do |
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| 33 | sed -i "s/$1[ ]*=[ ]*[[:alnum:]\.]*/$1=$2/g" run.def |
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| 34 | shift; shift; |
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| 35 | done |
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| 36 | } |
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| 37 | |
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| 38 | function create_exp() |
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| 39 | { |
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| 40 | # EXP_NAME param_dir run grid post_XX |
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| 41 | mkdir -p $TESTING/$WORK/$1 |
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| 42 | cd $TESTING/$WORK/$1 |
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| 43 | ln -sf $DYNAMICO/bin/icosa_gcm.exe . |
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| 44 | ln -sf $TESTING/$WORK/$4 mygrid |
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| 45 | ln -sf $TESTING/include_*.sh . |
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| 46 | ln -sf $TESTING/iodef.xml $TESTING/lmdz_physics.xml . |
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| 47 | cp $TESTING/$WORK/param_sets/$2/*.def . |
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| 48 | cp -f "$3.def" tmp.def |
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| 49 | mv -f tmp.def run.def |
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| 50 | redef nsplit_i 2 nsplit_j 2 |
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| 51 | print_run_job > run.job |
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| 52 | print_post_job > post.job |
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| 53 | echo $5 >> post.job |
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| 54 | chmod a+rx *.job |
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| 55 | } |
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| 56 | |
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| 57 | function grid() |
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| 58 | { |
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| 59 | echo gridtype = lonlat |
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| 60 | echo xsize = $1 |
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| 61 | echo xfirst = $2 |
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| 62 | echo xinc = $3 |
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| 63 | echo ysize = $4 |
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| 64 | echo yfirst = $5 |
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| 65 | echo yinc = $6 |
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| 66 | } |
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| 67 | |
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| 68 | |
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| 69 | ########################### Resolution-dependent parameters #################### |
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| 70 | function nbpX() { redef nbp $1 dt $2 tau_graddiv $3 tau_gradrot $3 tau_divgrad $3 |
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| 71 | } |
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| 72 | function nbp32() { nbpX 32 600 21600 |
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| 73 | } |
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| 74 | function nbp64() { nbpX 64 300 10800 |
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| 75 | } |
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| 76 | function nbp128() { nbpX 128 150 5400 |
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| 77 | } |
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| 78 | function nbp40() { nbpX 40 480 18000 |
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| 79 | } |
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| 80 | function nbp80() { nbpX 80 240 9000 |
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| 81 | } |
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| 82 | function nbp160() { nbpX 160 120 4500 |
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| 83 | } |
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| 84 | ################################### Test cases ################################# |
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| 85 | |
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| 86 | # Williamson (1991) |
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| 87 | |
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| 88 | function W91() |
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| 89 | { |
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| 90 | EXP=W91_6_$1 |
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| 91 | echo "$EXP : nbp=$1 dt=$2 grid=$4" |
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| 92 | create_exp $EXP shallow_water/williamson91 run6 $4 post_W91 |
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| 93 | ln -sf $TESTING/icosa_SW.xml icosa.xml |
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| 94 | redef nbp $1 dt $2 tau_graddiv $3 tau_gradrot $3 tau_divgrad $3 |
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| 95 | redef write_period 86400 run_length 2592000 |
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| 96 | submit_run_and_post $EXP |
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| 97 | } |
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| 98 | |
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| 99 | # Jablonowski & Williamson (2006) |
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| 100 | |
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| 101 | function JW06() |
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| 102 | { |
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| 103 | EXP=JW06_$1 |
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| 104 | echo "$EXP : nbp=$1 dt=$2 grid=$4" |
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| 105 | create_exp $EXP dcmip2012 run41 $4 post_JW06 |
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| 106 | ln -sf $TESTING/icosa_JW06.xml icosa.xml |
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| 107 | # redef nbp $1 dt $2 tau_graddiv $3 tau_gradrot $3 tau_divgrad $3 |
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| 108 | nbp$1 |
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| 109 | redef write_period 86400 run_length 864000 etat0 jablonowsky06 |
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| 110 | submit_run_and_post $EXP |
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| 111 | } |
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| 112 | |
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| 113 | # DCMIP1.2 Transport by Hadley-like circulation |
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| 114 | |
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| 115 | function DCMIP12() |
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| 116 | { |
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| 117 | EXP=DCMIP12_$1_$2 |
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| 118 | echo "$EXP : nbp=$1 llm=$2 ncar_dz=$3 dt=$4 grid=$5" |
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| 119 | create_exp $EXP dcmip2012 run11 $5 post_DCMIP12 |
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| 120 | redef nqtot 1 nbp $1 llm $2 ncar_dz $3 dt $4 |
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| 121 | redef dcmip1_shape hadley dcmip1_wind hadley run_length 86400 write_period 3600 |
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| 122 | submit_run_and_post $EXP |
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| 123 | } |
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| 124 | |
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| 125 | # DCMIP2.0 Rest over orography (PGF error) |
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| 126 | |
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| 127 | function DCMIP20() |
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| 128 | { |
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| 129 | EXP=DCMIP20_$1_$2 |
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| 130 | echo "$EXP : nbp=$1 llm=$2 ncar_dz=$3 dt=$4 grid=$5" |
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| 131 | create_exp $EXP dcmip2012 run20 $5 post_DCMIP20 |
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| 132 | # redef nbp $1 dt $4 |
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| 133 | nbp$1 |
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| 134 | redef nqtot 0 llm $2 ncar_dz $3 |
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| 135 | # from make_rundefs.sh : group 'Time' run_length 518400 write_period 21600 |
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| 136 | # comment out the following line to conform to DCMIP document |
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| 137 | # redef run_length 86400 write_period 3600 |
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| 138 | submit_run_and_post $EXP |
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| 139 | } |
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| 140 | |
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| 141 | # DCMIP2.1 Orographic wave |
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| 142 | |
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| 143 | function DCMIP21() |
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| 144 | { |
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| 145 | EXP=DCMIP21_$1_$2 |
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| 146 | echo "$EXP : nbp=$1 llm=$2 ncar_dz=$3 dt=$4 grid=$5" |
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| 147 | create_exp $EXP dcmip2012 run21 $5 post_DCMIP21 |
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| 148 | # redef nbp $1 dt $4 |
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| 149 | nbp$1 |
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| 150 | redef nqtot 0 llm $2 ncar_dz $3 run_length 86400 write_period 3600 |
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| 151 | submit_run_and_post $EXP |
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| 152 | } |
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| 153 | |
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| 154 | # DCMIP3.1 Non-orographic gravity wave |
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| 155 | |
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| 156 | function DCMIP31() |
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| 157 | { |
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| 158 | EXP=DCMIP31_$1_$2 |
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| 159 | echo "$EXP : nbp=$1 llm=$2 ncar_dz=$3 dt=$4 grid=$5" |
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| 160 | create_exp $EXP dcmip2012 run3 $5 post_DCMIP31 |
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| 161 | # redef nbp $1 dt $4 |
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| 162 | nbp$1 |
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| 163 | redef nqtot 0 llm $2 ncar_dz $3 run_length 86400 write_period 3600 |
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| 164 | submit_run_and_post $EXP |
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| 165 | } |
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| 166 | |
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| 167 | # DCMIP4.1 JW06 on a small planet with tracers |
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| 168 | |
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| 169 | function DCMIP41() |
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| 170 | { |
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| 171 | EXP=DCMIP41_$1 |
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| 172 | echo "$EXP : nbp=$1 dt=$2 tau_dissip=$3 grid=$4" |
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| 173 | create_exp $EXP dcmip2012 run41 $4 post_DCMIP41 |
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| 174 | # redef nbp $1 dt $2 tau_graddiv $3 tau_gradrot $3 tau_divgrad $3 |
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| 175 | nbp$1 |
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| 176 | redef nqtot 2 write_period 86400 run_length 864000 |
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| 177 | submit_run_and_post $EXP |
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| 178 | } |
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| 179 | |
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| 180 | # DCMIP5 Tropical cyclone |
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| 181 | |
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| 182 | function DCMIP51() |
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| 183 | { |
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| 184 | EXP=DCMIP51_$1 |
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| 185 | echo "$EXP : nbp=$1 dt=$2 grid=$4" |
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| 186 | create_exp $EXP dcmip2012 run51 $4 post_DCMIP51 |
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| 187 | nbp$1 |
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| 188 | # redef nbp $1 dt $2 tau_graddiv $3 tau_gradrot $3 tau_divgrad $3 |
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| 189 | redef itau_physics 6 |
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| 190 | submit_run_and_post $EXP |
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| 191 | } |
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| 192 | |
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| 193 | # Held & Suarez (1994) |
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| 194 | |
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| 195 | function HS94() |
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| 196 | { |
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| 197 | EXP=HS94_$1_$3 |
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| 198 | echo "$EXP : nbp=$1 dt=$2 grid=$4" |
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| 199 | create_exp $EXP climate/Held_Suarez run $4 post_HS |
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| 200 | nbp$1 |
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| 201 | # redef nbp $1 dt $2 tau_graddiv $3 tau_gradrot $3 tau_divgrad $3 |
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| 202 | submit_run_and_post $EXP |
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| 203 | } |
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| 204 | |
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| 205 | # Saturn : start from rest, vertical temperature profile read from file |
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| 206 | |
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| 207 | function Saturn() |
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| 208 | { |
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| 209 | EXP=SATURN_$1 |
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| 210 | echo "$EXP : nbp=$1 dt=$2 grid=$4" |
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| 211 | create_exp $EXP planets run_saturn $4 |
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| 212 | for x in saturn_const.def callphys.def gases.def icosa.xml apbp.txt temp_profile.txt DATAGENERIC; do |
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| 213 | ln -s $TESTING/SATURN/TEST/$x |
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| 214 | done |
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| 215 | ln -sf $TESTING/icosa_SW.xml icosa.xml |
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| 216 | redef nbp $1 dt $2 tau_graddiv $3 tau_gradrot $3 tau_divgrad $3 |
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| 217 | redef nsplit_i 1 nsplit_j 1 nqtot 0 |
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| 218 | redef run_length 38052 # 1 Saturn day |
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| 219 | # redef run_length 3805200 # 100 Saturn days |
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| 220 | # redef run_length 76104000 # 20000 Saturn day |
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| 221 | # echo post_SATURN >> post.job |
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| 222 | # submit_run_and_post $EXP |
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| 223 | } |
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| 224 | |
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| 225 | ######################################## Main ####################################### |
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| 226 | |
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| 227 | function reset() |
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| 228 | { |
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| 229 | echo "Testing DYNAMICO revision $revision" |
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| 230 | set -x |
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| 231 | rm -rf $TESTING/$WORK |
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| 232 | mkdir $TESTING/$WORK |
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| 233 | set +x |
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| 234 | |
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| 235 | mkdir $TESTING/$WORK/param_sets |
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| 236 | cd $TESTING/$WORK/param_sets |
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| 237 | $TESTING/trunk/param_sets/make_rundefs.sh |
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| 238 | |
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| 239 | cd $TESTING/$WORK |
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| 240 | grid 720 0.25 0.5 360 -89.75 0.5 > fine_grid |
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| 241 | grid 360 0.5 1 180 -89.5 1 > medium_grid |
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| 242 | grid 180 1 2 90 -89 2 > coarse_grid |
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| 243 | } |
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| 244 | |
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| 245 | function debug() |
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| 246 | { |
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| 247 | # W91 32 600 21600 coarse_grid |
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| 248 | # HS94 32 600 86400 coarse_grid |
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| 249 | JW06 32 600 21600 coarse_grid |
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| 250 | # DCMIP12 40 30 400 600 coarse_grid |
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| 251 | # DCMIP12 80 60 200 300 medium_grid |
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| 252 | # DCMIP12 160 120 100 150 medium_grid |
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| 253 | # DCMIP20 40 30 400 480 coarse_grid |
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| 254 | # DCMIP21 40 60 500 480 coarse_grid |
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| 255 | # DCMIP31 40 10 1000 480 coarse_grid |
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| 256 | # DCMIP41 32 600 21600 coarse_grid |
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| 257 | # DCMIP51 32 600 21600 coarse_grid |
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| 258 | # cp -pr $TESTING/trunk/param_sets/planets $TESTING/$WORK/param_sets |
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| 259 | # Saturn 10 475.65 5000 coarse_grid |
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| 260 | } |
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| 261 | |
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| 262 | function fast() |
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| 263 | { |
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| 264 | W91 32 600 21600 coarse_grid |
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| 265 | JW06 32 600 21600 coarse_grid |
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| 266 | DCMIP12 40 30 400 600 coarse_grid |
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| 267 | DCMIP20 40 30 400 480 coarse_grid |
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| 268 | DCMIP21 40 60 500 480 coarse_grid |
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| 269 | DCMIP31 40 10 1000 480 coarse_grid |
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| 270 | DCMIP41 32 600 21600 coarse_grid |
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| 271 | DCMIP51 32 600 43200 coarse_grid |
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| 272 | } |
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| 273 | |
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| 274 | function GMD_2014() |
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| 275 | { |
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| 276 | # W91 32 600 21600 coarse_grid |
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| 277 | # JW06 32 600 21600 coarse_grid |
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| 278 | HS94 32 600 86400 coarse_grid |
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| 279 | } |
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| 280 | |
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| 281 | function extended() |
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| 282 | { |
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| 283 | W91 64 300 10800 fine_grid |
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| 284 | W91 128 150 5400 fine_grid |
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| 285 | JW06 64 300 10800 fine_grid |
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| 286 | JW06 128 150 5400 fine_grid |
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| 287 | DCMIP51 64 300 21600 fine_grid |
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| 288 | DCMIP51 128 150 10800 fine_grid |
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| 289 | HS94 32 600 86400 fine_grid |
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| 290 | HS94 32 600 5400 fine_grid |
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| 291 | HS94 40 480 50000 fine_grid |
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| 292 | HS94 40 480 21600 fine_grid |
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| 293 | HS94 64 300 10800 fine_grid |
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| 294 | } |
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| 295 | |
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| 296 | #set -o errexit |
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| 297 | |
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| 298 | # include machine-specific helper/wrapper functions : |
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| 299 | # print_run_job print_post_job submit_run_and_post qstat |
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| 300 | |
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| 301 | source include_site.sh |
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| 302 | |
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| 303 | clear |
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| 304 | echo "Usage : testing.sh [reset] [debug|fast|extended]" |
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| 305 | TESTING=$PWD |
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| 306 | DYNAMICO=$TESTING/trunk |
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| 307 | # find out revision number |
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| 308 | cd $DYNAMICO |
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| 309 | svn info --xml | grep revision | head -n 1 > info.xml |
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| 310 | sed -i "s/>//g" info.xml |
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| 311 | . info.xml |
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| 312 | WORK="r$revision" |
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| 313 | |
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| 314 | for x in $* ; do |
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| 315 | echo $x |
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| 316 | $x |
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| 317 | done |
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| 318 | |
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| 319 | #qstat |
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