#!/bin/bash # This script provides site-specific functions # called by the site-independent scripts # create_runs.sh and submit.sh # NB : we must the queue 'normal' because there seems to be a limit # on the number of jobs that can be submitted to queue 'test' #----------------------------- split_XXX ---------------------------- function split_serial_40() { setvar nbp 41 nsplit_i 2 nsplit_j 2 } function split_mpi_40() { setvar nbp 41 nsplit_i 2 nsplit_j 2 } function split_mpi_80() { setvar nbp 81 nsplit_i 4 nsplit_j 2 } #----------------- job submission ------------------ function submit_job_X64_CURIE() # $1=script $* = SLURM OPTIONS { TMP=$(mktemp) ccc_msub $1 > $TMP cat $TMP 1>&2 cat $TMP | awk '{print $NF }' rm -f $TMP } #------------------------------ job_XXX ----------------------------- function job_serial() { # EXP_NAME job_X64_CURIE $1 1 "" } function job_serial_40() { # EXP_NAME job_serial $1 } function job_mpi() { #EXP_NAME NB_MPI job_X64_CURIE $1 $2 ccc_mprun } function job_mpi_40() { # EXP_NAME job_mpi $1 40 } function job_mpi_80() { # EXP_NAME job_mpi $1 80 } function job_X64_CURIE() { # EXP_NAME MPI_TASKS MPIRUN cat < gcm.log ulimit -s unlimited $3 ./gcm.exe >> gcm.log date >> gcm.log mkdir -p netcdf cp gcm.log *.def netcdf mv *.nc netcdf mkdir -p logs cp *.xml logs mv xios_client_*.err xios_client_*.out gcm.log logs EOF } #------------------------------ post-processing job ----------------------------- function job_post_X64_CURIE() # LIST { DEPLIST=afterany for ID in $* ; do DEPLIST="$DEPLIST:$ID" done cat <