#!/bin/bash function log() { echo $* $* } function cmd_clean() # cleanup, invoked by : './make_python clean' { rm -rf lib/*.so lib/dynamico cd $DYNAMICO_ROOT/Python/src rm -rf *.o *.so build/ } function make_so() { ARLIB=$1 SOLIB=$2 if [[ $ARLIB -nt $SOLIB ]]; then echo $ARLIB is newer than $SOLIB rm -f tmp.a cp $ARLIB tmp.a if [[ "$4" != "" ]] ; then ar vd tmp.a $4 ; fi if [[ "$5" != "" ]] ; then ar vr tmp.a $5 ; fi log $LINK $SOFLAGS $WHOLE_ARCHIVE tmp.a $NO_WHOLE_ARCHIVE $3 -o $SOLIB rm -f tmp.a $LDD $SOLIB fi } function check_python_modules() { MISSING="" for module in $*; do echo "import $module" python -c "import $module" || MISSING="$MISSING $module" done if [[ "$MISSING" == "" ]] ; then echo "All required Python modules seem present." else echo "Missing/dysfunctional python modules : $MISSING" echo "Please fix your Python configuration" exit fi } function check_dynamico_modules() { cd $DYNAMICO_ROOT for module in $*; do echo "import dynamico.$module" LD_PRELOAD=$PYTHON_PRELOAD python -c "import dynamico.$module" done } function cythonize() { EXTRA=$1 NUMPY=$(python -c 'import numpy as np ; print np.get_include()') CYTHONFLAGS="$SOFLAGS $LDFLAGS -L$LIBDIR $KERNELS_LDFLAGS $EXTRA" CC=mpicc LDSHARED="$LINK" CFLAGS="-fno-strict-aliasing -O2 -I$NUMPY $PARMETIS_CFLAGS" LDFLAGS="$CYTHONFLAGS" log python setup.py build_ext --inplace || exit rm -rf build *.c # temp files } #------------------ Default action , invoked by : './make_python' -------------------- function make_user() { check_python_modules netCDF4 mpi4py # Cythonize Python modules cd $DYNAMICO_ROOT/Python/dynamico cythonize rm -rf build *.c # temp files cp -fpr $DYNAMICO_ROOT/Python/dynamico $DYNAMICO_ROOT/lib check_dynamico_modules partition meshes dyn time_step DCMIP } function make_dev() { check_python_modules jinja2 echo "XIOS_ROOTDIR : $XIOS_ROOTDIR" make_so $XIOS_ROOTDIR/lib/libxios.a $LIBDIR/libxios.so "$NETCDF_LDFLAGS -lstdc++" make_so $LIBDIR/libicosa.a $LIBDIR/libicosa.so "-L$LIBDIR -lxios $KERNELS_LDFLAGS" "physics_external_mod.o physics_mod.o timeloop_gcm_mod.o icosa_init_mod.o" cd $DYNAMICO_ROOT/Python/dev cythonize "-licosa" cp -fpr $DYNAMICO_ROOT/Python/dev $DYNAMICO_ROOT/lib/dynamico/ check_dynamico_modules dev.cxios dev.unstructured } function cmd_() { make_user } function cmd_dev() { make_user make_dev } #------------------------- script starts here ------------------------ DYNAMICO_ROOT=$PWD LIBDIR=$DYNAMICO_ROOT/lib . arch.env . arch.path echo "Selected architecture : $CURRENT_ARCH" if [[ "$CURRENT_ARCH" == "" ]] ; then echo "Current architecture undefined or unsupported" ; exit ; fi cd arch . arch-${CURRENT_ARCH}.dev cd $DYNAMICO_ROOT time cmd_$1