[615] | 1 | #!/bin/bash |
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| 2 | |
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| 3 | function log() |
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| 4 | { |
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| 5 | echo $* |
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| 6 | $* |
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| 7 | } |
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| 8 | |
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| 9 | function full_dir() |
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| 10 | { |
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| 11 | (cd -P $1 ; pwd) |
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| 12 | } |
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| 13 | |
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| 14 | #--------------- Generate kernels, invoked by : './make_python kernels' --------------- |
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| 15 | |
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| 16 | function update() |
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| 17 | { |
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| 18 | diff $2 $1 || log cp -pr $1 $2 |
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| 19 | } |
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| 20 | |
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| 21 | function cmd_kernels() # this function is invoked by : './make_python kernels' |
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| 22 | { |
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| 23 | cd $KERNELS |
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| 24 | ./codegen hexagonal unstructured |
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| 25 | |
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| 26 | cd $KERNELS/src/hexagonal |
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| 27 | for x in *.k90 ; do |
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| 28 | update "$x" "$DYNAMICO_ROOT/src/kernels_hex/$x" |
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| 29 | done |
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| 30 | |
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| 31 | cd $KERNELS/src/unstructured |
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| 32 | for x in *.k90 ; do |
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| 33 | update "$x" "$DYNAMICO_ROOT/src/kernels_unst/$x" |
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| 34 | done |
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| 35 | |
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| 36 | # make sure to recompile dynamics |
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| 37 | cd $DYNAMICO_ROOT |
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| 38 | touch src/dynamics/*.F90 src/diagnostics/*.F90 src/transport/*.F90 src/unstructured/*.F90} |
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| 39 | } |
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| 40 | |
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| 41 | #------------------ Default action , invoked by : './make_python' -------------------- |
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| 42 | |
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| 43 | function make_so() |
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| 44 | { |
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| 45 | ARLIB=$1 |
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| 46 | SOLIB=$2 |
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[621] | 47 | |
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[615] | 48 | if [[ $ARLIB -nt $SOLIB ]]; then |
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| 49 | echo $ARLIB is newer than $SOLIB |
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[621] | 50 | rm -f tmp.a |
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| 51 | cp $ARLIB tmp.a |
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| 52 | ar vd tmp.a $4 |
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| 53 | ar vr tmp.a $5 |
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| 54 | log $LINK $SOFLAGS $WHOLE_ARCHIVE tmp.a $NO_WHOLE_ARCHIVE $3 -o $SOLIB |
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| 55 | rm -f tmp.a |
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[615] | 56 | $LDD $SOLIB |
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| 57 | fi |
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| 58 | } |
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| 59 | |
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| 60 | |
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| 61 | function cmd_() |
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| 62 | { |
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[621] | 63 | MISSING="" |
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| 64 | for module in netCDF4 jinja2 mpi4py; do |
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| 65 | echo "import $module" |
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| 66 | python -c "import $module" || MISSING="$MISSING $module" |
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| 67 | done |
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| 68 | if [[ "$MISSING" == "" ]] ; then |
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| 69 | echo "All required Python modules seem present." |
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| 70 | else |
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| 71 | echo "Missing/dysfunctional python modules : $MISSING" |
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| 72 | echo "Please fix your Python configuration" |
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| 73 | exit |
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| 74 | fi |
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| 75 | |
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| 76 | log mpicc -c -std=c99 -fPIC $PARMETIS_CFLAGS Python/src/partition.c -o obj/partition.o |
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[615] | 77 | make_so $XIOS_ROOTDIR/lib/libxios.a $LIBDIR/libxios.so "$NETCDF_LDFLAGS" |
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[621] | 78 | make_so $LIBDIR/libicosa.a $LIBDIR/libicosa.so "-L$LIBDIR -lxios $KERNELS_LDFLAGS" "physics_external_mod.o physics_mod.o timeloop_gcm_mod.o icosa_init_mod.o" obj/partition.o |
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[615] | 79 | |
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| 80 | # Cythonize Python modules |
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| 81 | cd $DYNAMICO_ROOT/Python/src |
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[621] | 82 | CYTHONFLAGS="$SOFLAGS $LDFLAGS -L$LIBDIR -licosa $KERNELS_LDFLAGS" |
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[615] | 83 | LDSHARED="$LINK" CFLAGS="-fno-strict-aliasing -O2" LDFLAGS="$CYTHONFLAGS" log python setup.py build_ext --inplace |
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[621] | 84 | cp -fpr $DYNAMICO_ROOT/Python/dynamico $DYNAMICO_ROOT/lib |
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| 85 | cp -fp *.so $DYNAMICO_ROOT/lib/dynamico/ |
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| 86 | cd $DYNAMICO_ROOT |
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| 87 | |
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| 88 | for module in DCMIP time_step dyn xios unstructured; do |
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| 89 | echo "from dynamico import $module" |
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| 90 | python -c "from dynamico import $module" |
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| 91 | done |
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[615] | 92 | } |
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| 93 | |
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| 94 | #------------------------- script starts here ------------------------ |
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| 95 | |
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| 96 | DYNAMICO_ROOT=$PWD |
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| 97 | LIBDIR=$DYNAMICO_ROOT/lib |
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| 98 | KERNELS=$DYNAMICO_ROOT/Python |
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| 99 | |
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| 100 | . arch.env |
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| 101 | . arch.path |
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| 102 | |
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| 103 | echo "Selected architecture : $CURRENT_ARCH" |
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| 104 | |
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| 105 | if [[ "$CURRENT_ARCH" == "" ]] ; then echo "Current architecture undefined or unsupported" ; exit ; fi |
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| 106 | |
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| 107 | . Python/env/${CURRENT_ARCH}.env |
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| 108 | |
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| 109 | cmd_$1 |
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